RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 SLC6A12P48065 614 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 ARHGDIAP52565 204 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 PFN3P60673 137 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 VLDLRP98155 873 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 AQP6Q13520 282 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 GTF2IRD2BQ6EKJ0 949 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 OR2T5Q6IEZ7 315 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 GTF2IRD2Q86UP8 949 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 FAM217AQ8IXS0 508 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 SLAIN1Q8ND83 568 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 OR2T29Q8NH02 315 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 MAL2Q969L2 176 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 FAM83DQ9H4H8 585 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 SAMHD1Q9Y3Z3 626 aaKnown RBP16.88■□□□□ 0.29
COL9A1-201ENST00000320755 NUAK1O60285 661 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 BCAS1O75363 584 aaPredicted RBP16.88■□□□□ 0.29
COL9A1-201ENST00000320755 CCNDBP1O95273 360 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 CXCL10P02778 98 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 DAPP51397 102 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 ACSM2AQ08AH3 577 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 DUOXA1Q1HG43 343 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 TRIM60Q495X7 471 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 ACSM2BQ68CK6 577 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 PLPP6Q8IY26 295 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 ATG16L2Q8NAA4 619 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 ECHDC3Q96DC8 303 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 LINC00597Q9H2U6 94 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 LMCD1Q9NZU5 365 aa16.88■□□□□ 0.29
COL9A1-201ENST00000320755 SAMD4AQ9UPU9 718 aaKnown RBP16.88■□□□□ 0.29
COL9A1-201ENST00000320755 MAGEB17A8MXT2 336 aa16.87■□□□□ 0.29
COL9A1-201ENST00000320755 RECQLP46063 649 aaPredicted RBP16.87■□□□□ 0.29
COL9A1-201ENST00000320755 HNMTP50135 292 aa16.87■□□□□ 0.29
COL9A1-201ENST00000320755 ITGADQ13349 1161 aa16.87■□□□□ 0.29
COL9A1-201ENST00000320755 CHPFQ8IZ52 775 aa16.87■□□□□ 0.29
COL9A1-201ENST00000320755 L3MBTL4Q8NA19 623 aa16.87■□□□□ 0.29
COL9A1-201ENST00000320755 PIK3C3Q8NEB9 887 aa16.87■□□□□ 0.29
COL9A1-201ENST00000320755 TESCQ96BS2 214 aa16.87■□□□□ 0.29
COL9A1-201ENST00000320755 RIOK2Q9BVS4 552 aaKnown RBP16.87■□□□□ 0.29
COL9A1-201ENST00000320755 MAGIXQ9H6Y5 334 aa16.87■□□□□ 0.29
COL9A1-201ENST00000320755 KIF17Q9P2E2 1029 aa16.87■□□□□ 0.29
COL9A1-201ENST00000320755 VPS29Q9UBQ0 182 aa16.87■□□□□ 0.29
COL9A1-201ENST00000320755 AP3M1Q9Y2T2 418 aa16.87■□□□□ 0.29
COL9A1-201ENST00000320755 KCNK5O95279 499 aa16.87■□□□□ 0.29
COL9A1-201ENST00000320755 GBAP04062 536 aa16.87■□□□□ 0.29
COL9A1-201ENST00000320755 PRPS1L1P21108 318 aa16.87■□□□□ 0.29
COL9A1-201ENST00000320755 EMX1Q04741 257 aaPredicted RBP16.87■□□□□ 0.29
COL9A1-201ENST00000320755 DOC2AQ14183 400 aa16.87■□□□□ 0.29
COL9A1-201ENST00000320755 NR1D2Q14995 579 aa16.87■□□□□ 0.29
COL9A1-201ENST00000320755 VMACQ2NL98 169 aa16.87■□□□□ 0.29
COL9A1-201ENST00000320755 METTL2BQ6P1Q9 378 aaKnown RBP16.87■□□□□ 0.29
COL9A1-201ENST00000320755 SMYD1Q8NB12 490 aa16.87■□□□□ 0.29
COL9A1-201ENST00000320755 SH3BP4Q9P0V3 963 aa16.87■□□□□ 0.29
COL9A1-201ENST00000320755 GMPPBQ9Y5P6 360 aa16.87■□□□□ 0.29
COL9A1-201ENST00000320755 C8AP07357 584 aa16.86■□□□□ 0.29
COL9A1-201ENST00000320755 KDELR2P33947 212 aa16.86■□□□□ 0.29
COL9A1-201ENST00000320755 BDKRB1P46663 353 aa16.86■□□□□ 0.29
COL9A1-201ENST00000320755 MOGQ16653 247 aa16.86■□□□□ 0.29
COL9A1-201ENST00000320755 SYTL3Q4VX76 610 aa16.86■□□□□ 0.29
COL9A1-201ENST00000320755 GDPD4Q6W3E5 623 aa16.86■□□□□ 0.29
COL9A1-201ENST00000320755 THOC6Q86W42 341 aaKnown RBP16.86■□□□□ 0.29
COL9A1-201ENST00000320755 TCAIMQ8N3R3 496 aa16.86■□□□□ 0.29
COL9A1-201ENST00000320755 CPXM2Q8N436 756 aa16.86■□□□□ 0.29
COL9A1-201ENST00000320755 MAGED4Q96JG8 741 aa16.86■□□□□ 0.29
COL9A1-201ENST00000320755 HSH2DQ96JZ2 352 aa16.86■□□□□ 0.29
COL9A1-201ENST00000320755 MCCC1Q96RQ3 725 aaPredicted RBP16.86■□□□□ 0.29
COL9A1-201ENST00000320755 HS3ST2Q9Y278 367 aa16.86■□□□□ 0.29
COL9A1-201ENST00000320755 ARHGEF33A8MVX0 844 aa16.86■□□□□ 0.29
COL9A1-201ENST00000320755 GFYI3L273 518 aa16.86■□□□□ 0.29
COL9A1-201ENST00000320755 NDUFS2O75306 463 aa16.86■□□□□ 0.29
COL9A1-201ENST00000320755 JUPP14923 745 aa16.86■□□□□ 0.29
COL9A1-201ENST00000320755 GP2P55259 537 aaKnown RBP16.86■□□□□ 0.29
COL9A1-201ENST00000320755 TUBA3CQ13748 450 aa16.86■□□□□ 0.29
COL9A1-201ENST00000320755 HKDC1Q2TB90 917 aa16.86■□□□□ 0.29
COL9A1-201ENST00000320755 DEFB115Q30KQ5 88 aa16.86■□□□□ 0.29
COL9A1-201ENST00000320755 ARSIQ5FYB1 569 aa16.86■□□□□ 0.29
COL9A1-201ENST00000320755 MPP7Q5T2T1 576 aa16.86■□□□□ 0.29
COL9A1-201ENST00000320755 GALNT13Q8IUC8 556 aa16.86■□□□□ 0.29
COL9A1-201ENST00000320755 ASZ1Q8WWH4 475 aa16.86■□□□□ 0.29
COL9A1-201ENST00000320755 ERLEC1Q96DZ1 483 aa16.86■□□□□ 0.29
COL9A1-201ENST00000320755 TCEAL4Q96EI5 215 aa16.86■□□□□ 0.29
COL9A1-201ENST00000320755 IL1RAPQ9NPH3 570 aa16.86■□□□□ 0.29
COL9A1-201ENST00000320755 ZNF451Q9Y4E5 1061 aa16.86■□□□□ 0.29
COL9A1-201ENST00000320755 TRIM17Q9Y577 477 aa16.86■□□□□ 0.29
COL9A1-201ENST00000320755 SCN8AQ9UQD0 1980 aa16.86■□□□□ 0.29
COL9A1-201ENST00000320755 ZBBXA8MT70 800 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 CFAP99D6REC4 459 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 GRM6O15303 877 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 TSPAN6O43657 245 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 CLPXO76031 633 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 ETHE1O95571 254 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 FABP3P05413 133 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 CCR2P41597 374 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 NPTX1Q15818 432 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 SHQ1Q6PI26 577 aaKnown RBP16.85■□□□□ 0.29
COL9A1-201ENST00000320755 Q6ZNX1 250 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 METTL3Q86U44 580 aaKnown RBP16.85■□□□□ 0.29
COL9A1-201ENST00000320755 C1orf52Q8N6N3 182 aaKnown RBP16.85■□□□□ 0.29
COL9A1-201ENST00000320755 CSGALNACT1Q8TDX6 532 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 HERC2P3Q9BVR0 1158 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 RUBCNLQ9H714 662 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms