RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 OR2T5Q6IEZ7 315 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 AMZ2Q86W34 360 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 THOC6Q86W42 341 aaKnown RBP16.04■□□□□ 0.16
CLIP4-201ENST00000320081 LEMD2Q8NC56 503 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 OR2T29Q8NH02 315 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 TDP1Q9NUW8 608 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 TMEM30AQ9NV96 361 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 DNAAF2Q9NVR5 837 aaKnown RBP16.04■□□□□ 0.16
CLIP4-201ENST00000320081 NLE1Q9NVX2 485 aaPredicted RBP16.04■□□□□ 0.16
CLIP4-201ENST00000320081 CACNB4O00305 520 aaPredicted RBP16.04■□□□□ 0.16
CLIP4-201ENST00000320081 HCN1O60741 890 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 ZNF623O75123 536 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 LEFTY1O75610 366 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 PRNPP04156 253 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 TIE1P35590 1138 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 IFNGR2P38484 337 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 MAP2K4P45985 399 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 IFI44LQ53G44 452 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 PIGGQ5H8A4 983 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 ENPP6Q6UWR7 440 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 LCN9Q8WX39 176 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 HSH2DQ96JZ2 352 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 GPATCH1Q9BRR8 931 aaKnown RBP16.04■□□□□ 0.16
CLIP4-201ENST00000320081 KRCC1Q9NPI7 259 aaPredicted RBP16.04■□□□□ 0.16
CLIP4-201ENST00000320081 TLR9Q9NR96 1032 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 PHPT1Q9NRX4 125 aaPredicted RBP16.04■□□□□ 0.16
CLIP4-201ENST00000320081 MRPL39Q9NYK5 338 aaKnown RBP16.04■□□□□ 0.16
CLIP4-201ENST00000320081 C5AR2Q9P296 337 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 PMF1-BGLAPU3KQ54 211 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 COL2A1P02458 1487 aaPredicted RBP16.04■□□□□ 0.16
CLIP4-201ENST00000320081 LOC100130705A0A1B0GUX0 176 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 LRRC72A6NJI9 287 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 EFCAB9A8MZ26 197 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 MAGEB3O15480 346 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 GUCY1B2O75343 617 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 BCKDHAP12694 445 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 KIAA1161Q6NSJ0 714 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 LETMD1Q6P1Q0 360 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 C22orf39Q6P5X5 142 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 NFKBIDQ8NI38 313 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 FUBP1Q96AE4 644 aaKnown RBP16.04■□□□□ 0.16
CLIP4-201ENST00000320081 AHCYL2Q96HN2 611 aaKnown RBP16.04■□□□□ 0.16
CLIP4-201ENST00000320081 CMTM6Q9NX76 183 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 COMMD3Q9UBI1 195 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 MTRRQ9UBK8 725 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 EBF1Q9UH73 591 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 HMX2A2RU54 273 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 FAM189A1O60320 539 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 C6orf47O95873 294 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 C8GP07360 202 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 PRPS1L1P21108 318 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 ALAS2P22557 587 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 PSMA1P25786 263 aaKnown RBP16.03■□□□□ 0.16
CLIP4-201ENST00000320081 HTR1BP28222 390 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 GPR33Q49SQ1 333 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 USP30Q70CQ3 517 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 GLB1L3Q8NCI6 653 aaPredicted RBP16.03■□□□□ 0.16
CLIP4-201ENST00000320081 PSD4Q8NDX1 1056 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 ZNF599Q96NL3 588 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 POLR2J3Q9H1A7 115 aaKnown RBP16.03■□□□□ 0.16
CLIP4-201ENST00000320081 ITGB4P16144 1822 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 SLX4Q8IY92 1834 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 CAPN14A8MX76 684 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 H7BY64 318 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 SRSF11Q05519 484 aaKnown RBP16.03■□□□□ 0.16
CLIP4-201ENST00000320081 ELP6Q0PNE2 266 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 RFTN1Q14699 578 aaPredicted RBP16.03■□□□□ 0.16
CLIP4-201ENST00000320081 BEND5Q7L4P6 421 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 CLECL1Q8IZS7 167 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 IGSF21Q96ID5 467 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 PRAP1Q96NZ9 151 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 POLR2J2Q9GZM3 115 aaKnown RBP16.03■□□□□ 0.16
CLIP4-201ENST00000320081 CCNB1IP1Q9NPC3 277 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 IGSF5Q9NSI5 407 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 MCUBQ9NWR8 336 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 ZIM2Q9NZV7 527 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 DLGAP4Q9Y2H0 992 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 DHRS7Q9Y394 339 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 MBLAC1A4D2B0 266 aaPredicted RBP16.03■□□□□ 0.16
CLIP4-201ENST00000320081 MITFO75030 526 aaPredicted RBP16.03■□□□□ 0.16
CLIP4-201ENST00000320081 ERN1O75460 977 aaKnown RBP16.03■□□□□ 0.16
CLIP4-201ENST00000320081 LAMP2P13473 410 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.03■□□□□ 0.16
CLIP4-201ENST00000320081 FAM46CQ5VWP2 391 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 KBTBD6Q86V97 674 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 CPA6Q8N4T0 437 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 ATP6V1C2Q8NEY4 427 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 OR5K1Q8NHB7 308 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 PMEPA1Q969W9 287 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 RERGQ96A58 199 aaPredicted RBP16.03■□□□□ 0.16
CLIP4-201ENST00000320081 TAMM41Q96BW9 452 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 MS4A4AQ96JQ5 239 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 TIMMDC1Q9NPL8 285 aa16.03■□□□□ 0.16
CLIP4-201ENST00000320081 NDRG2Q9UN36 371 aaKnown RBP16.03■□□□□ 0.16
CLIP4-201ENST00000320081 PPIBP23284 216 aaKnown RBP16.02■□□□□ 0.16
CLIP4-201ENST00000320081 ACTR1BP42025 376 aa16.02■□□□□ 0.16
CLIP4-201ENST00000320081 IL12RB1P42701 662 aa16.02■□□□□ 0.16
CLIP4-201ENST00000320081 MLLT10P55197 1068 aa16.02■□□□□ 0.16
CLIP4-201ENST00000320081 ACTR1AP61163 376 aa16.02■□□□□ 0.16
CLIP4-201ENST00000320081 KRR1Q13601 381 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms