RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 NR4A1P22736 598 aa12.68□□□□□ -0.38
CPNE1-201ENST00000317677 XPAP23025 273 aaPredicted RBP12.68□□□□□ -0.38
CPNE1-201ENST00000317677 SOX9P48436 509 aa12.68□□□□□ -0.38
CPNE1-201ENST00000317677 ERVPABLB-1P60509 514 aa12.68□□□□□ -0.38
CPNE1-201ENST00000317677 SMAD4Q13485 552 aaKnown RBP12.68□□□□□ -0.38
CPNE1-201ENST00000317677 ART3Q13508 389 aa12.68□□□□□ -0.38
CPNE1-201ENST00000317677 ZXDCQ2QGD7 858 aaPredicted RBP12.68□□□□□ -0.38
CPNE1-201ENST00000317677 ZNF773Q6PK81 442 aa12.68□□□□□ -0.38
CPNE1-201ENST00000317677 KIAA2013Q8IYS2 634 aa12.68□□□□□ -0.38
CPNE1-201ENST00000317677 BEND7Q8N7W2 519 aaPredicted RBP12.68□□□□□ -0.38
CPNE1-201ENST00000317677 LSMEM1Q8N8F7 131 aa12.68□□□□□ -0.38
CPNE1-201ENST00000317677 OR8D1Q8WZ84 308 aa12.68□□□□□ -0.38
CPNE1-201ENST00000317677 ELSPBP1Q96BH3 223 aa12.68□□□□□ -0.38
CPNE1-201ENST00000317677 CDK15Q96Q40 435 aa12.68□□□□□ -0.38
CPNE1-201ENST00000317677 FAM126AQ9BYI3 521 aaPredicted RBP12.68□□□□□ -0.38
CPNE1-201ENST00000317677 TRIT1Q9H3H1 467 aaKnown RBP12.68□□□□□ -0.38
CPNE1-201ENST00000317677 AKTIPQ9H8T0 292 aa12.68□□□□□ -0.38
CPNE1-201ENST00000317677 PRSS16Q9NQE7 514 aa12.68□□□□□ -0.38
CPNE1-201ENST00000317677 CACNA2D2Q9NY47 1150 aa12.68□□□□□ -0.38
CPNE1-201ENST00000317677 ENPP5Q9UJA9 477 aa12.68□□□□□ -0.38
CPNE1-201ENST00000317677 CNOT6Q9ULM6 557 aaKnown RBP12.68□□□□□ -0.38
CPNE1-201ENST00000317677 SNX13Q9Y5W8 968 aa12.68□□□□□ -0.38
CPNE1-201ENST00000317677 TBC1D3BA6NDS4 549 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 TMEM202A6NGA9 273 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 SOCS2O14508 198 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 ASNA1O43681 348 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 ICMTO60725 284 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 DEAF1O75398 565 aaPredicted RBP12.67□□□□□ -0.38
CPNE1-201ENST00000317677 OR4F21O95013 312 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 KAT7O95251 611 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 OR56A5P0C7T3 313 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 ELFN1P0C7U0 828 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 IL9P15248 144 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 RPL10P27635 214 aaKnown RBP12.67□□□□□ -0.38
CPNE1-201ENST00000317677 SERPINB1P30740 379 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 GDI1P31150 447 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 AKT1P31749 480 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 MSX2P35548 267 aaPredicted RBP12.67□□□□□ -0.38
CPNE1-201ENST00000317677 CTSCP53634 463 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 PHC1P78364 1004 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 GRB7Q14451 532 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 ELAVL3Q14576 367 aaKnown RBP12.67□□□□□ -0.38
CPNE1-201ENST00000317677 ACOX1Q15067 660 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 PGS1Q32NB8 556 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 CDONQ4KMG0 1287 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 LETMD1Q6P1Q0 360 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 GK5Q6ZS86 529 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 GOLGA7Q7Z5G4 137 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 BTLAQ7Z6A9 289 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 AFAP1L2Q8N4X5 818 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 BTN2A2Q8WVV5 523 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 RCN3Q96D15 328 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 DTD2Q96FN9 168 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 BCL7BQ9BQE9 202 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 SLC39A3Q9BRY0 314 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 NOL11Q9H8H0 719 aaKnown RBP12.67□□□□□ -0.38
CPNE1-201ENST00000317677 KLHL42Q9P2K6 505 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 KLQ9UEF7 1012 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 KRT87PA6NCN2 255 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 K7ESM1 405 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 CDK2AP1O14519 115 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 RAD51BO15315 384 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 DNAJB5O75953 348 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 GNAO1P09471 354 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 LINC00032P0C843 101 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 ADRB3P13945 408 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 IFNA8P32881 189 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 GDF5P43026 501 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 HSPA7P48741 367 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 ATAT1Q5SQI0 421 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 CCNYL2Q5T2Q4 361 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 ERAP2Q6P179 960 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 ERMP1Q7Z2K6 904 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 SLC51BQ86UW2 128 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 GJD3Q8N144 294 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 MFSD4AQ8N468 514 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 RASGEF1AQ8N9B8 481 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 PIK3C3Q8NEB9 887 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 SNX19Q92543 992 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 RHBDF1Q96CC6 855 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 AP2M1Q96CW1 435 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 VPS35Q96QK1 796 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 ZNF382Q96SR6 550 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 CSF3RQ99062 836 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 ZSCAN5AQ9BUG6 496 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 POLG2Q9UHN1 485 aa12.67□□□□□ -0.38
CPNE1-201ENST00000317677 COL4A2P08572 1712 aa12.66□□□□□ -0.38
CPNE1-201ENST00000317677 ZFC3H1O60293 1989 aaKnown RBP12.66□□□□□ -0.38
CPNE1-201ENST00000317677 A8MU76 341 aa12.66□□□□□ -0.38
CPNE1-201ENST00000317677 EVPLLA8MZ36 301 aa12.66□□□□□ -0.38
CPNE1-201ENST00000317677 UBDO15205 165 aa12.66□□□□□ -0.38
CPNE1-201ENST00000317677 CFLARO15519 480 aa12.66□□□□□ -0.38
CPNE1-201ENST00000317677 MSL3P1P0C860 447 aa12.66□□□□□ -0.38
CPNE1-201ENST00000317677 PRR35P0CG20 571 aa12.66□□□□□ -0.38
CPNE1-201ENST00000317677 CBSLP0DN79 551 aa12.66□□□□□ -0.38
CPNE1-201ENST00000317677 CBSP35520 551 aa12.66□□□□□ -0.38
CPNE1-201ENST00000317677 HTR6P50406 440 aa12.66□□□□□ -0.38
CPNE1-201ENST00000317677 TRAF3Q13114 568 aa12.66□□□□□ -0.38
CPNE1-201ENST00000317677 RBBP7Q16576 425 aa12.66□□□□□ -0.38
CPNE1-201ENST00000317677 TTLL9Q3SXZ7 439 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms