RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 IFT20Q8IY31 132 aa11.54□□□□□ -0.56
SCFD1-201ENST00000311943 CENPLQ8N0S6 344 aaPredicted RBP11.54□□□□□ -0.56
SCFD1-201ENST00000311943 DCAKDQ8WVC6 231 aa11.54□□□□□ -0.56
SCFD1-201ENST00000311943 MOCOSQ96EN8 888 aa11.54□□□□□ -0.56
SCFD1-201ENST00000311943 PAFAH2Q99487 392 aa11.54□□□□□ -0.56
SCFD1-201ENST00000311943 DPH1Q9BZG8 443 aa11.54□□□□□ -0.56
SCFD1-201ENST00000311943 SEMA4CQ9C0C4 833 aa11.54□□□□□ -0.56
SCFD1-201ENST00000311943 PHACTR1Q9C0D0 580 aa11.54□□□□□ -0.56
SCFD1-201ENST00000311943 MRPS30Q9NP92 439 aaKnown RBP11.54□□□□□ -0.56
SCFD1-201ENST00000311943 IGSF5Q9NSI5 407 aa11.54□□□□□ -0.56
SCFD1-201ENST00000311943 SPATA7Q9P0W8 599 aa11.54□□□□□ -0.56
SCFD1-201ENST00000311943 KALRNO60229 2985 aa11.54□□□□□ -0.56
SCFD1-201ENST00000311943 OR2A25A4D2G3 310 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 MEN1O00255 615 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 NDC80O14777 642 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 RIPK2O43353 540 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 CAPN1P07384 714 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 CDH1P12830 882 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 CYP2A7P20853 494 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 ALAS2P22557 587 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 OR1D4P47884 311 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 CSRP3P50461 194 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 RAB10P61026 200 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 POU4F1Q01851 419 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 PRDX1Q06830 199 aaKnown RBP11.53□□□□□ -0.56
SCFD1-201ENST00000311943 WASHC2DQ5SRD0 308 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 ZNF385CQ66K41 422 aaPredicted RBP11.53□□□□□ -0.56
SCFD1-201ENST00000311943 RAPH1Q70E73 1250 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 PRSS41Q7RTY9 318 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 PAQR7Q86WK9 346 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 RELL1Q8IUW5 271 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 FBXO15Q8NCQ5 510 aaPredicted RBP11.53□□□□□ -0.56
SCFD1-201ENST00000311943 MAGEC3Q8TD91 643 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 MCOLN3Q8TDD5 553 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 EXTL1Q92935 676 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 MR1Q95460 341 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 UBXN10Q96LJ8 280 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 TEFMQ96QE5 360 aaKnown RBP11.53□□□□□ -0.56
SCFD1-201ENST00000311943 TMEM79Q9BSE2 394 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 ALG9Q9H6U8 611 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 ACTR5Q9H9F9 607 aaPredicted RBP11.53□□□□□ -0.56
SCFD1-201ENST00000311943 GPN2Q9H9Y4 310 aaPredicted RBP11.53□□□□□ -0.56
SCFD1-201ENST00000311943 SNX15Q9NRS6 342 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 SLC22A14Q9Y267 594 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 CACNA1GO43497 2377 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 E7EQ34 232 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 H0YGG7 62 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 DNAJB6O75190 326 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 C2P06681 752 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 C8GP07360 202 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 GSTA2P09210 222 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 SPRP35270 261 aaPredicted RBP11.53□□□□□ -0.56
SCFD1-201ENST00000311943 AGTR2P50052 363 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 PMS2P54278 862 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 SLC12A2P55011 1212 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 ITGA1P56199 1179 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 ARF3P61204 181 aaPredicted RBP11.53□□□□□ -0.56
SCFD1-201ENST00000311943 VAC14Q08AM6 782 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 IL10RAQ13651 578 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 LY6DQ14210 128 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 TGFBIQ15582 683 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 COLEC12Q5KU26 742 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 PRAMEF13Q5VWM6 474 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 ZNF425Q6IV72 752 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 TTLL10Q6ZVT0 673 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 ISCA2Q86U28 154 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 OR2W6PQ8NHA6 318 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 GABPB2Q8TAK5 448 aaPredicted RBP11.53□□□□□ -0.56
SCFD1-201ENST00000311943 SLC44A1Q8WWI5 657 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 N4BP2L2Q92802 583 aaPredicted RBP11.53□□□□□ -0.56
SCFD1-201ENST00000311943 PLCD4Q9BRC7 762 aa11.53□□□□□ -0.56
SCFD1-201ENST00000311943 CORO1CQ9ULV4 474 aaPredicted RBP11.53□□□□□ -0.56
SCFD1-201ENST00000311943 ZSCAN9O15535 394 aaPredicted RBP11.52□□□□□ -0.56
SCFD1-201ENST00000311943 VARSP26640 1264 aaKnown RBP11.52□□□□□ -0.56
SCFD1-201ENST00000311943 TMPRSS3P57727 454 aa11.52□□□□□ -0.56
SCFD1-201ENST00000311943 SYT16Q17RD7 645 aa11.52□□□□□ -0.56
SCFD1-201ENST00000311943 ERCC6LQ2NKX8 1250 aa11.52□□□□□ -0.56
SCFD1-201ENST00000311943 STARD8Q92502 1023 aa11.52□□□□□ -0.56
SCFD1-201ENST00000311943 NEIL2Q969S2 332 aa11.52□□□□□ -0.56
SCFD1-201ENST00000311943 SLC22A18Q96BI1 424 aa11.52□□□□□ -0.56
SCFD1-201ENST00000311943 PDLIM5Q96HC4 596 aaKnown RBP11.52□□□□□ -0.56
SCFD1-201ENST00000311943 OR2A5Q96R48 311 aa11.52□□□□□ -0.56
SCFD1-201ENST00000311943 CYTH2Q99418 400 aa11.52□□□□□ -0.56
SCFD1-201ENST00000311943 SGPP1Q9BX95 441 aa11.52□□□□□ -0.56
SCFD1-201ENST00000311943 CCDC177Q9NQR7 707 aaPredicted RBP11.52□□□□□ -0.56
SCFD1-201ENST00000311943 TBK1Q9UHD2 729 aa11.52□□□□□ -0.56
SCFD1-201ENST00000311943 SERTAD3Q9UJW9 196 aa11.52□□□□□ -0.56
SCFD1-201ENST00000311943 PADI1Q9ULC6 663 aa11.52□□□□□ -0.56
SCFD1-201ENST00000311943 PLCL2Q9UPR0 1127 aa11.52□□□□□ -0.56
SCFD1-201ENST00000311943 SCN3AQ9NY46 2000 aa11.52□□□□□ -0.57
SCFD1-201ENST00000311943 OR2W5A6NFC9 320 aa11.52□□□□□ -0.57
SCFD1-201ENST00000311943 GOLGA8RI6L899 631 aa11.52□□□□□ -0.57
SCFD1-201ENST00000311943 UBXN8O00124 270 aa11.52□□□□□ -0.57
SCFD1-201ENST00000311943 CPNE3O75131 537 aaKnown RBP11.52□□□□□ -0.57
SCFD1-201ENST00000311943 TFEBP19484 476 aa11.52□□□□□ -0.57
SCFD1-201ENST00000311943 CMPK1P30085 196 aa11.52□□□□□ -0.57
SCFD1-201ENST00000311943 SLCO1A2P46721 670 aa11.52□□□□□ -0.57
SCFD1-201ENST00000311943 GCGRP47871 477 aa11.52□□□□□ -0.57
SCFD1-201ENST00000311943 HSPA7P48741 367 aa11.52□□□□□ -0.57
SCFD1-201ENST00000311943 CSNK1G2P78368 415 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms