RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 FAM136AQ96C01 138 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 DGCR14Q96DF8 476 aaKnown RBP3.11□□□□□ -1.91
CLOCK-201ENST00000309964 CNDP2Q96KP4 475 aaKnown RBP3.11□□□□□ -1.91
CLOCK-201ENST00000309964 FRMD6Q96NE9 622 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 LGMNQ99538 433 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 TBC1D10AQ9BXI6 508 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 MEPEQ9NQ76 525 aaPredicted RBP3.11□□□□□ -1.91
CLOCK-201ENST00000309964 FBXO6Q9NRD1 293 aaPredicted RBP3.11□□□□□ -1.91
CLOCK-201ENST00000309964 GPRC5BQ9NZH0 403 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 ZNF624Q9P2J8 865 aaPredicted RBP3.11□□□□□ -1.91
CLOCK-201ENST00000309964 HAO1Q9UJM8 370 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 FBXW2Q9UKT8 454 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 PLEKHA6Q9Y2H5 1048 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 MYBPHLA2RUH7 354 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 CCDC182A6NF36 153 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 PHYHO14832 338 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 KHNYNO15037 678 aaKnown RBP3.11□□□□□ -1.91
CLOCK-201ENST00000309964 B4GALT5O43286 388 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 DNAJB5O75953 348 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 UBL4AP11441 157 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 MATN1P21941 496 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 PSMB9P28065 219 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 HTR3AP46098 478 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 DNASE1L1P49184 302 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 SMSP52788 366 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 MTTPP55157 894 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 ACTC1P68032 377 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 ACTA1P68133 377 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 PWP1Q13610 501 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 TUBA3CQ13748 450 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 FASTKD3Q14CZ7 662 aaKnown RBP3.11□□□□□ -1.91
CLOCK-201ENST00000309964 UPP1Q16831 310 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 KCTD18Q6PI47 426 aaPredicted RBP3.11□□□□□ -1.91
CLOCK-201ENST00000309964 RHBDF2Q6PJF5 856 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 ARHGAP36Q6ZRI8 547 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 CLEC20AQ6ZU45 233 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 CYS1Q717R9 158 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 MEIOBQ8N635 442 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 TP53INP1Q96A56 240 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 SLC35G5Q96KT7 338 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 TMEM109Q9BVC6 243 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 CLK4Q9HAZ1 481 aaKnown RBP3.11□□□□□ -1.91
CLOCK-201ENST00000309964 SPHK2Q9NRA0 654 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 PNPLA3Q9NST1 481 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 CMTM6Q9NX76 183 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 TUBA8Q9NY65 449 aaPredicted RBP3.11□□□□□ -1.91
CLOCK-201ENST00000309964 NINJ2Q9NZG7 142 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 ZIM2Q9NZV7 527 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 EIF3KQ9UBQ5 218 aaKnown RBP3.11□□□□□ -1.91
CLOCK-201ENST00000309964 CD207Q9UJ71 328 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 BAIAP2Q9UQB8 552 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 VSTM2BA6NLU5 285 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 ENPP3O14638 875 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 PLIN3O60664 434 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 UGDHO60701 494 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 TSPAN9O75954 239 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 FABP3P05413 133 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 DRD4P21917 467 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 EDNRBP24530 442 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 TIE1P35590 1138 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 TNFSF9P41273 254 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 CLCN2P51788 898 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 NR1H2P55055 460 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 MOGQ16653 247 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 YOD1Q5VVQ6 348 aaPredicted RBP3.11□□□□□ -1.91
CLOCK-201ENST00000309964 GPAT4Q86UL3 456 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 CDKN2AIPNLQ96HQ2 116 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 SH3GL2Q99962 352 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 EPHX3Q9H6B9 360 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 EVLQ9UI08 416 aaPredicted RBP3.11□□□□□ -1.91
CLOCK-201ENST00000309964 SPATA2Q9UM82 520 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 RPL36Q9Y3U8 105 aaKnown RBP3.11□□□□□ -1.91
CLOCK-201ENST00000309964 STYXL1Q9Y6J8 313 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 TGM5O43548 720 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 ZNF432O94892 652 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 AHSA1O95433 338 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 DLGAP3O95886 979 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 PENKP01210 267 aaPredicted RBP3.11□□□□□ -1.91
CLOCK-201ENST00000309964 C8BP07358 591 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 ADRB2P07550 413 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 RNH1P13489 461 aaKnown RBP3.11□□□□□ -1.91
CLOCK-201ENST00000309964 BGNP21810 368 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 MC3RP41968 323 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 RBM34P42696 430 aaKnown RBP3.11□□□□□ -1.91
CLOCK-201ENST00000309964 SLC6A8P48029 635 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 GPR143P51810 404 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 KCNC4Q03721 635 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 ST3GAL4Q11206 333 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 PAFAH1B3Q15102 231 aaKnown RBP3.11□□□□□ -1.91
CLOCK-201ENST00000309964 SNAPC1Q16533 368 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 CYP1B1Q16678 543 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 ZNF57Q68EA5 555 aaPredicted RBP3.11□□□□□ -1.91
CLOCK-201ENST00000309964 PRR23CQ6ZRP0 262 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 CYP2U1Q7Z449 544 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 GRASPQ7Z6J2 395 aaPredicted RBP3.11□□□□□ -1.91
CLOCK-201ENST00000309964 FAM124AQ86V42 546 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 GALNT12Q8IXK2 581 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 NXPE1Q8N323 547 aa3.11□□□□□ -1.91
CLOCK-201ENST00000309964 PAPD5Q8NDF8 572 aaKnown RBP3.11□□□□□ -1.91
CLOCK-201ENST00000309964 CPT1BQ92523 772 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms