RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 CRLS1Q9UJA2 301 aa8.03□□□□□ -1.12
CHD6-201ENST00000309279 SLC39A10Q9ULF5 831 aa8.03□□□□□ -1.12
CHD6-201ENST00000309279 CFL2Q9Y281 166 aa8.03□□□□□ -1.12
CHD6-201ENST00000309279 PCYT1BQ9Y5K3 369 aaPredicted RBP8.03□□□□□ -1.12
CHD6-201ENST00000309279 ST14Q9Y5Y6 855 aa8.03□□□□□ -1.12
CHD6-201ENST00000309279 IQANK1A0A1B0GTG1 560 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 NEMP2A6NFY4 417 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 C4orf47A7E2U8 309 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 TM4SF5O14894 197 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 SCAMP1O15126 338 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 GRID2O43424 1007 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 PPM1BO75688 479 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 PRSS56P0CW18 603 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 GIMD1P0DJR0 217 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 GAAP10253 952 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 CD59P13987 128 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 ATP1B2P14415 290 aaPredicted RBP8.02□□□□□ -1.13
CHD6-201ENST00000309279 ALOX15P16050 662 aaPredicted RBP8.02□□□□□ -1.13
CHD6-201ENST00000309279 MSH3P20585 1137 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 EEF1DP29692 281 aaKnown RBP8.02□□□□□ -1.13
CHD6-201ENST00000309279 STAT5AP42229 794 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 NSG1P42857 185 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 CARSP49589 748 aaKnown RBP8.02□□□□□ -1.13
CHD6-201ENST00000309279 TTPAP49638 278 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 GBX2P52951 348 aaPredicted RBP8.02□□□□□ -1.13
CHD6-201ENST00000309279 RAD23AP54725 363 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 SSTP61278 116 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 COTL1Q14019 142 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 ELOCQ15369 112 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 KYNUQ16719 465 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 TYSND1Q2T9J0 566 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 IGSF11Q5DX21 431 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 PRRT3Q5FWE3 981 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 AARS2Q5JTZ9 985 aaKnown RBP8.02□□□□□ -1.13
CHD6-201ENST00000309279 HP1BP3Q5SSJ5 553 aaPredicted RBP8.02□□□□□ -1.13
CHD6-201ENST00000309279 RNF220Q5VTB9 566 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 NEPROQ6NW34 567 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 MTFR2Q6P444 385 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 DOK6Q6PKX4 331 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 SEZ6L2Q6UXD5 910 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 UNC5AQ6ZN44 842 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 CYS1Q717R9 158 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 TAS2R42Q7RTR8 314 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 RD3Q7Z3Z2 195 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 THAP5Q7Z6K1 395 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 CILP2Q8IUL8 1156 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 IFT20Q8IY31 132 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 KIAA2013Q8IYS2 634 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 ZBED8Q8IZ13 594 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 RBFAQ8N0V3 343 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 FSTL5Q8N475 847 aaPredicted RBP8.02□□□□□ -1.13
CHD6-201ENST00000309279 FBXO36Q8NEA4 188 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 ZNF548Q8NEK5 533 aaPredicted RBP8.02□□□□□ -1.13
CHD6-201ENST00000309279 NETO1Q8TDF5 533 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 PYROXD1Q8WU10 500 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 DIO2Q92813 273 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.02□□□□□ -1.13
CHD6-201ENST00000309279 COQ7Q99807 217 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 CITED2Q99967 270 aaPredicted RBP8.02□□□□□ -1.13
CHD6-201ENST00000309279 LRRC61Q9BV99 259 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 FUT8Q9BYC5 575 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 PAIP1Q9H074 479 aaKnown RBP8.02□□□□□ -1.13
CHD6-201ENST00000309279 CLPBQ9H078 707 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 TMEM168Q9H0V1 697 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 TSPAN10Q9H1Z9 355 aaPredicted RBP8.02□□□□□ -1.13
CHD6-201ENST00000309279 EPS8L2Q9H6S3 715 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 UCK1Q9HA47 277 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 NPHS2Q9NP85 383 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 CATSPERZQ9NTU4 200 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 UCKL1Q9NWZ5 548 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 LRFN1Q9P244 771 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 C5AR2Q9P296 337 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 MARCH4Q9P2E8 410 aaPredicted RBP8.02□□□□□ -1.13
CHD6-201ENST00000309279 MBD2Q9UBB5 411 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 ZNHIT2Q9UHR6 403 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 CORO2BQ9UQ03 480 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 CHMP2BQ9UQN3 213 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 CLDN16Q9Y5I7 305 aa8.02□□□□□ -1.13
CHD6-201ENST00000309279 CNOT1A5YKK6 2376 aaKnown RBP8.02□□□□□ -1.13
CHD6-201ENST00000309279 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.01□□□□□ -1.13
CHD6-201ENST00000309279 PRR19A6NJB7 356 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 FOXO6A8MYZ6 492 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 TARM1B6A8C7 271 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 LMO7DNF2Z398 122 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 KMOO15229 486 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 AQP9O43315 295 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 SUSD5O60279 629 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 SDC3O75056 442 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 BCAS2O75934 225 aaPredicted RBP8.01□□□□□ -1.13
CHD6-201ENST00000309279 DLGAP3O95886 979 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 TPBGLP0DKB5 382 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 RALBP11234 206 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 CTSEP14091 401 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 CCNA2P20248 432 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 OGNP20774 298 aaKnown RBP8.01□□□□□ -1.13
CHD6-201ENST00000309279 GSTT1P30711 240 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 AKT1P31749 480 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 GNPDA1P46926 289 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 CLCNKAP51800 687 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 CTSCP53634 463 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms