RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 LEXMQ3ZCV2 418 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 KHDRBS2Q5VWX1 349 aaKnown RBP4.79□□□□□ -1.64
CAST-201ENST00000309190 PNCKQ6P2M8 343 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 SNX20Q7Z614 316 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 ZNF614Q8N883 585 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 CALML6Q8TD86 181 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 ZNF597Q96LX8 424 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 GPR78Q96P69 363 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 SLC39A3Q9BRY0 314 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 APOOQ9BUR5 198 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 GATA5Q9BWX5 397 aaPredicted RBP4.79□□□□□ -1.64
CAST-201ENST00000309190 TSSK1BQ9BXA7 367 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 PRO3102Q9H379 93 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 RHOJQ9H4E5 214 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 FAM124BQ9H5Z6 455 aaPredicted RBP4.79□□□□□ -1.64
CAST-201ENST00000309190 LIN28AQ9H9Z2 209 aaKnown RBP4.79□□□□□ -1.64
CAST-201ENST00000309190 EVA1BQ9NVM1 165 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 PTTG2Q9NZH5 202 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 EHD3Q9NZN3 535 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 SH3BP4Q9P0V3 963 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 ZNF639Q9UID6 485 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 TMCO1Q9UM00 188 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.79□□□□□ -1.645e-7■■■■■ 33.7
CAST-201ENST00000309190 PRR14LQ5THK1 2151 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 SPAARA0A1B0GVQ0 90 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 OR1F1O43749 312 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 SLC2A4P14672 509 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 TPSB2P20231 275 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 ADRA1AP35348 466 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 MRPL19P49406 292 aaKnown RBP4.79□□□□□ -1.64
CAST-201ENST00000309190 LIMK1P53667 647 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 UBAP2LQ14157 1087 aaKnown RBP4.79□□□□□ -1.64
CAST-201ENST00000309190 EIF4HQ15056 248 aaKnown RBP4.79□□□□□ -1.64
CAST-201ENST00000309190 TPSAB1Q15661 275 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 MPP7Q5T2T1 576 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 ARMC6Q6NXE6 501 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 LPCAT2Q7L5N7 544 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 TMEM135Q86UB9 458 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 LSMEM2Q8N112 164 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 ZBTB2Q8N680 514 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 FAM156AQ8NDB6 213 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 MAPK15Q8TD08 544 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 BTN2A2Q8WVV5 523 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 CRELD1Q96HD1 420 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 HIC2Q96JB3 615 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 BMFQ96LC9 184 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 FAM210AQ96ND0 272 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 TRIM54Q9BYV2 358 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 IPPKQ9H8X2 491 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 INIPQ9NRY2 104 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 CD300AQ9UGN4 299 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 DUSP12Q9UNI6 340 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 POLR3HQ9Y535 204 aaPredicted RBP4.79□□□□□ -1.64
CAST-201ENST00000309190 SNX8Q9Y5X2 465 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 C4orf47A7E2U8 309 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 RHPN2P1A8MT19 583 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 MAN2B1O00754 1011 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 DLX3O60479 287 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 ATG13O75143 517 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 SMIM24O75264 130 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 JRKO75564 520 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 CTSBP07858 339 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 IL1RNP18510 177 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 CALRP27797 417 aaKnown RBP4.79□□□□□ -1.64
CAST-201ENST00000309190 CD38P28907 300 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 PPARGP37231 505 aaPredicted RBP4.79□□□□□ -1.64
CAST-201ENST00000309190 IDH3AP50213 366 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 HTR6P50406 440 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 OR1D5P58170 312 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 RFTN1Q14699 578 aaPredicted RBP4.79□□□□□ -1.64
CAST-201ENST00000309190 BCL2A1Q16548 175 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 AGAP9Q5VTM2 703 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 DHRS13Q6UX07 377 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 FRMD7Q6ZUT3 714 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 CYP2U1Q7Z449 544 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 ZFP28Q8NHY6 868 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 FAM81AQ8TBF8 368 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 MCOLN3Q8TDD5 553 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 WFIKKN2Q8TEU8 576 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 ASZ1Q8WWH4 475 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 RSC1A1Q92681 617 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 APOLD1Q96LR9 279 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 CPNE1Q99829 537 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 CCDC3Q9BQI4 270 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 YIPF4Q9BSR8 244 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 TUBB6Q9BUF5 446 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 EHD1Q9H4M9 534 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 TNFRSF12AQ9NP84 129 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 EQTNQ9NQ60 294 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 COMMD8Q9NX08 183 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 SPHK1Q9NYA1 384 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 FBXW2Q9UKT8 454 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 POMPQ9Y244 141 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 BTBD3Q9Y2F9 522 aa4.79□□□□□ -1.64
CAST-201ENST00000309190 SONP18583 2426 aaKnown RBP4.78□□□□□ -1.64
CAST-201ENST00000309190 WASH4PA8MWX3 477 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 TIMM44O43615 452 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 APBB3O95704 486 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 MT-ND1P03886 318 aa4.78□□□□□ -1.64
CAST-201ENST00000309190 CDH2P19022 906 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms