RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 HECTD3Q5T447 861 aa16.1■□□□□ 0.17
SSH3-201ENST00000308127 KDM4DQ6B0I6 523 aa16.1■□□□□ 0.17
SSH3-201ENST00000308127 TRIM46Q7Z4K8 759 aa16.1■□□□□ 0.17
SSH3-201ENST00000308127 CACTIN-AS1Q8N1I8 211 aa16.1■□□□□ 0.17
SSH3-201ENST00000308127 GLB1L3Q8NCI6 653 aaPredicted RBP16.1■□□□□ 0.17
SSH3-201ENST00000308127 APH1BQ8WW43 257 aa16.1■□□□□ 0.17
SSH3-201ENST00000308127 SH3KBP1Q96B97 665 aa16.1■□□□□ 0.17
SSH3-201ENST00000308127 KIAA1522Q9P206 1035 aaPredicted RBP16.1■□□□□ 0.17
SSH3-201ENST00000308127 ERN1O75460 977 aaKnown RBP16.1■□□□□ 0.17
SSH3-201ENST00000308127 KRT6AP02538 564 aa16.1■□□□□ 0.17
SSH3-201ENST00000308127 KRT6BP04259 564 aa16.1■□□□□ 0.17
SSH3-201ENST00000308127 ZDHHC11BP0C7U3 371 aa16.1■□□□□ 0.17
SSH3-201ENST00000308127 EBLN1P0CF75 366 aa16.1■□□□□ 0.17
SSH3-201ENST00000308127 KRT6CP48668 564 aa16.1■□□□□ 0.17
SSH3-201ENST00000308127 RAB15P59190 212 aa16.1■□□□□ 0.17
SSH3-201ENST00000308127 GPRC6AQ5T6X5 926 aa16.1■□□□□ 0.17
SSH3-201ENST00000308127 C17orf99Q6UX52 265 aa16.1■□□□□ 0.17
SSH3-201ENST00000308127 SERPINA13PQ6UXR4 307 aa16.1■□□□□ 0.17
SSH3-201ENST00000308127 UBE2R2Q712K3 238 aaPredicted RBP16.1■□□□□ 0.17
SSH3-201ENST00000308127 ENTHD1Q8IYW4 607 aa16.1■□□□□ 0.17
SSH3-201ENST00000308127 NLGN4XQ8N0W4 816 aa16.1■□□□□ 0.17
SSH3-201ENST00000308127 BEND7Q8N7W2 519 aaPredicted RBP16.1■□□□□ 0.17
SSH3-201ENST00000308127 GPR26Q8NDV2 337 aa16.1■□□□□ 0.17
SSH3-201ENST00000308127 MYLIPQ8WY64 445 aa16.1■□□□□ 0.17
SSH3-201ENST00000308127 IL1RAPQ9NPH3 570 aa16.1■□□□□ 0.17
SSH3-201ENST00000308127 RAD18Q9NS91 495 aa16.1■□□□□ 0.17
SSH3-201ENST00000308127 RLIMQ9NVW2 624 aa16.1■□□□□ 0.17
SSH3-201ENST00000308127 WDR37Q9Y2I8 494 aa16.1■□□□□ 0.17
SSH3-201ENST00000308127 PCDHB1Q9Y5F3 818 aa16.1■□□□□ 0.17
SSH3-201ENST00000308127 EVPLLA8MZ36 301 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 PSMD11O00231 422 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 GBAP04062 536 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 CCR7P32248 378 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 SLC19A1P41440 591 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 ALDH7A1P49419 539 aaKnown RBP16.09■□□□□ 0.17
SSH3-201ENST00000308127 CLDN8P56748 225 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 CRHR2Q13324 411 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 ACOX1Q15067 660 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 SF3B4Q15427 424 aaKnown RBP eCLIP16.09■□□□□ 0.173e-10■■■■■ 38.7
SSH3-201ENST00000308127 ADGRF1Q5T601 910 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 ZNF648Q5T619 568 aaPredicted RBP16.09■□□□□ 0.17
SSH3-201ENST00000308127 FAM180BQ6P0A1 224 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 PLPP6Q8IY26 295 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 SETD9Q8NE22 299 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 VMP1Q96GC9 406 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 PDLIM5Q96HC4 596 aaKnown RBP16.09■□□□□ 0.17
SSH3-201ENST00000308127 TMEM121BQ9BXQ6 578 aaPredicted RBP16.09■□□□□ 0.17
SSH3-201ENST00000308127 QPCTLQ9NXS2 382 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 H7C0S8 307 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 KCNK5O95279 499 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 ITGAMP11215 1152 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 PABPC1P11940 636 aaKnown RBP16.09■□□□□ 0.17
SSH3-201ENST00000308127 ACRV1P26436 265 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 KIR3DL1P43629 444 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 SERPINB10P48595 397 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 ABHD18Q0P651 414 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 ILF2Q12905 390 aaKnown RBP16.09■□□□□ 0.17
SSH3-201ENST00000308127 TAF12Q16514 161 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 SYT6Q5T7P8 510 aaPredicted RBP16.09■□□□□ 0.17
SSH3-201ENST00000308127 SYT12Q8IV01 421 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 GPR156Q8NFN8 814 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 USP7Q93009 1102 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 Q96MT0 163 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 SYT17Q9BSW7 474 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 OR51E2Q9H255 320 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 GPR83Q9NYM4 423 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 RAPGEFL1Q9UHV5 662 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 LINC00854A0A1B0GVQ3 168 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 AIREO43918 545 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 ANXA5P08758 320 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 LAMP1P11279 417 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 COX7A2P14406 83 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 RRM2P31350 389 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 KDELR2P33947 212 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 CAP1Q01518 475 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 CAMK2GQ13555 558 aaPredicted RBP16.09■□□□□ 0.17
SSH3-201ENST00000308127 CDH18Q13634 790 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 TRIM71Q2Q1W2 868 aaKnown RBP16.09■□□□□ 0.17
SSH3-201ENST00000308127 CST9Q5W186 159 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 STEAP3Q658P3 488 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 CAPN13Q6MZZ7 669 aaPredicted RBP16.09■□□□□ 0.17
SSH3-201ENST00000308127 TPGS1Q6ZTW0 290 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 HEATR4Q86WZ0 1026 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 PTOV1Q86YD1 416 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 ZZZ3Q8IYH5 903 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 SPPL2AQ8TCT8 520 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 UTP15Q8TED0 518 aaKnown RBP16.09■□□□□ 0.17
SSH3-201ENST00000308127 S100ZQ8WXG8 99 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 APOL4Q9BPW4 351 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 COPS4Q9BT78 406 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 TTPALQ9BTX7 342 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 RMND5AQ9H871 391 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 REEP1Q9H902 201 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 SNX8Q9Y5X2 465 aa16.09■□□□□ 0.17
SSH3-201ENST00000308127 NPIPB15A6NHN6 443 aaPredicted RBP16.08■□□□□ 0.16
SSH3-201ENST00000308127 SYN3O14994 580 aa16.08■□□□□ 0.16
SSH3-201ENST00000308127 ALOX12P18054 663 aa16.08■□□□□ 0.16
SSH3-201ENST00000308127 SERPINB1P30740 379 aa16.08■□□□□ 0.16
SSH3-201ENST00000308127 STK19P49842 368 aaPredicted RBP16.08■□□□□ 0.16
SSH3-201ENST00000308127 NPRL3Q12980 569 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms