RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 HS3ST5Q8IZT8 346 aa10.62□□□□□ -0.71
LSM3-201ENST00000306024 FNDC5Q8NAU1 212 aa10.62□□□□□ -0.71
LSM3-201ENST00000306024 GTF2H4Q92759 462 aa10.62□□□□□ -0.71
LSM3-201ENST00000306024 MSANTD3Q96H12 275 aa10.62□□□□□ -0.71
LSM3-201ENST00000306024 ZDHHC6Q9H6R6 413 aa10.62□□□□□ -0.71
LSM3-201ENST00000306024 SPHK2Q9NRA0 654 aa10.62□□□□□ -0.71
LSM3-201ENST00000306024 ADGRE2Q9UHX3 823 aa10.62□□□□□ -0.71
LSM3-201ENST00000306024 EVLQ9UI08 416 aaPredicted RBP10.62□□□□□ -0.71
LSM3-201ENST00000306024 POLHQ9Y253 713 aa10.62□□□□□ -0.71
LSM3-201ENST00000306024 PCDHB9Q9Y5E1 797 aa10.62□□□□□ -0.71
LSM3-201ENST00000306024 PCDHGC4Q9Y5F7 938 aa10.62□□□□□ -0.71
LSM3-201ENST00000306024 PCDHGB6Q9Y5F9 930 aa10.62□□□□□ -0.71
LSM3-201ENST00000306024 A8MX80 341 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 AZIN1O14977 448 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 PIP5K1BO14986 540 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 PRKCGP05129 697 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 LTA4HP09960 611 aaKnown RBP10.61□□□□□ -0.71
LSM3-201ENST00000306024 KCNA5P22460 613 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 ARNTP27540 789 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 MTPNP58546 118 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 NRG1Q02297 640 aaPredicted RBP10.61□□□□□ -0.71
LSM3-201ENST00000306024 GALNT3Q14435 633 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 ATXN7L2Q5T6C5 722 aaPredicted RBP10.61□□□□□ -0.71
LSM3-201ENST00000306024 ARMC12Q5T9G4 340 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 PNCKQ6P2M8 343 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 GALNT7Q86SF2 657 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 ZC3HC1Q86WB0 502 aaKnown RBP10.61□□□□□ -0.71
LSM3-201ENST00000306024 LSMEM2Q8N112 164 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 OR8H3Q8N146 312 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 SLC47A1Q96FL8 570 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 GPR22Q99680 433 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 AMBNQ9NP70 447 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 LTB4R2Q9NPC1 389 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 MKLN1Q9UL63 735 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 UBA6A0AVT1 1052 aaPredicted RBP10.61□□□□□ -0.71
LSM3-201ENST00000306024 SCO2O43819 266 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 PRAMEF11O60813 436 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 FKBP9O95302 570 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 ADH5P11766 374 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 CAPN3P20807 821 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 CTSKP43235 329 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 CHRNA4P43681 627 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 AKR1D1P51857 326 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 GP2P55259 537 aaKnown RBP10.61□□□□□ -0.71
LSM3-201ENST00000306024 POM121L1PQ3SYA9 428 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 PLET1Q6UQ28 207 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 SERPINA13PQ6UXR4 307 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 CPA6Q8N4T0 437 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 PTGR2Q8N8N7 351 aaPredicted RBP10.61□□□□□ -0.71
LSM3-201ENST00000306024 TWIST2Q8WVJ9 160 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 KXD1Q9BQD3 176 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 AIFM2Q9BRQ8 373 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 UCK2Q9BZX2 261 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 ZBTB20Q9HC78 741 aaPredicted RBP10.61□□□□□ -0.71
LSM3-201ENST00000306024 ING3Q9NXR8 418 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 DNAJB9Q9UBS3 223 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 AASSQ9UDR5 926 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 FNDC1Q4ZHG4 1894 aaPredicted RBP10.61□□□□□ -0.71
LSM3-201ENST00000306024 C2orf81A6NN90 581 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 DRGXA6NNA5 263 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 KPNA3O00505 521 aaPredicted RBP10.61□□□□□ -0.71
LSM3-201ENST00000306024 DLGAP1O14490 977 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 HAT1O14929 419 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 POLR1CO15160 346 aaPredicted RBP10.61□□□□□ -0.71
LSM3-201ENST00000306024 LZTS3O60299 673 aaPredicted RBP10.61□□□□□ -0.71
LSM3-201ENST00000306024 PDE9AO76083 593 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 CSF2P04141 144 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 CAPNS1P04632 268 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 PFKLP17858 780 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 MAGEA3P43357 314 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 POU6F2P78424 691 aaPredicted RBP10.61□□□□□ -0.71
LSM3-201ENST00000306024 ZNF33AQ06730 810 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 IL18R1Q13478 541 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 ARHGEF7Q14155 803 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 CTF1Q16619 201 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 PFKFB4Q16877 469 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 BCL7AQ4VC05 210 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 HTR3DQ70Z44 454 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 DUS3LQ96G46 650 aaKnown RBP10.61□□□□□ -0.71
LSM3-201ENST00000306024 FCRL5Q96RD9 977 aa10.61□□□□□ -0.71
LSM3-201ENST00000306024 INTS6Q9UL03 887 aaKnown RBP10.61□□□□□ -0.71
LSM3-201ENST00000306024 PDCD11Q14690 1871 aaKnown RBP10.61□□□□□ -0.71
LSM3-201ENST00000306024 A8MT66 165 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 ITGB6P18564 788 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 SERPINA4P29622 427 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 PKLRP30613 574 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 LMAN2Q12907 356 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 GDPD3Q7L5L3 318 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 TMC8Q8IU68 726 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 MINDY1Q8N5J2 469 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 PARP16Q8N5Y8 322 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 OTUB2Q96DC9 234 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 ITCHQ96J02 903 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 RANGRFQ9HD47 186 aaPredicted RBP10.6□□□□□ -0.71
LSM3-201ENST00000306024 ATPIF1Q9UII2 106 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 PKP3Q9Y446 797 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 KNL1Q8NG31 2342 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 PLD2O14939 933 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 ACOX3O15254 700 aa10.6□□□□□ -0.71
LSM3-201ENST00000306024 KDELR3O43731 214 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms