RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 HEBP1Q9NRV9 189 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 HOXC11O43248 304 aaPredicted RBP12.68□□□□□ -0.38
TRIM35-201ENST00000305364 SEMA3DO95025 777 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 PCBP1Q15365 356 aaKnown RBP eCLIP12.68□□□□□ -0.38
TRIM35-201ENST00000305364 PSAPL1Q6NUJ1 521 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 GPR149Q86SP6 731 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 NOXA1Q86UR1 476 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 BBS7Q8IWZ6 715 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 LGI4Q8N135 537 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 PYCR2Q96C36 320 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 IKZF5Q9H5V7 419 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 RRAGCQ9HB90 399 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 AGO1Q9UL18 857 aaKnown RBP12.68□□□□□ -0.38
TRIM35-201ENST00000305364 MAPRE3Q9UPY8 281 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 FAM220BPB1ANY3 271 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 M0R129 80 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 PCMT1P22061 227 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 OR1G1P47890 313 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 RHOAP61586 193 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 E2F2Q14209 437 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 CDK10Q15131 360 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 CLPPQ16740 277 aaPredicted RBP12.68□□□□□ -0.38
TRIM35-201ENST00000305364 BTBD16Q32M84 506 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 PARP15Q460N3 678 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 KIAA0319Q5VV43 1072 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 CLDN19Q8N6F1 224 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 DNASE1L2Q92874 299 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 BTN2A3PQ96KV6 586 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 TCF25Q9BQ70 676 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 ABHD16BQ9H3Z7 469 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 FAM105AQ9NUU6 356 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 RBPJLQ9UBG7 517 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 ENOPH1Q9UHY7 261 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 RAI2Q9Y5P3 530 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 A0A1W2PQ67 120 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 F8W810 466 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 ICMTO60725 284 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 PRKAR1AP10644 381 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 IRF8Q02556 426 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 PRKCDQ05655 676 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 BOP1Q14137 746 aaKnown RBP12.68□□□□□ -0.38
TRIM35-201ENST00000305364 RUNDC3AQ59EK9 446 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 ZC3H12BQ5HYM0 836 aaKnown RBP12.68□□□□□ -0.38
TRIM35-201ENST00000305364 PRAMEF19Q5SWL8 479 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 MOB2Q70IA6 237 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 RNF180Q86T96 592 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 ZSWIM9Q86XI8 627 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 CRELD1Q96HD1 420 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 FEVQ99581 238 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 SMAD5Q99717 465 aaKnown RBP12.68□□□□□ -0.38
TRIM35-201ENST00000305364 BARD1Q99728 777 aaKnown RBP12.68□□□□□ -0.38
TRIM35-201ENST00000305364 C16orf70Q9BSU1 422 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 KCNH6Q9H252 994 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 C11orf16Q9NQ32 467 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 ZNF222Q9UK12 451 aa12.68□□□□□ -0.38
TRIM35-201ENST00000305364 GRXCR2A6NFK2 248 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 CLCA1A8K7I4 914 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 UPK3BL1B0FP48 263 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 UPK3BL2E5RIL1 263 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 EPHA2P29317 976 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 ZNF280AP59817 542 aaPredicted RBP12.67□□□□□ -0.38
TRIM35-201ENST00000305364 TAF1AQ15573 450 aaPredicted RBP12.67□□□□□ -0.38
TRIM35-201ENST00000305364 SLC14A2Q15849 920 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 LCN1P1Q5VSP4 162 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 PJA1Q8NG27 643 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 SNAPC3Q92966 411 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 ACBD6Q9BR61 282 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 CCDC32Q9BV29 185 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 PLSCR3Q9NRY6 295 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 ABCB8Q9NUT2 735 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 COMMD3Q9UBI1 195 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 SMIM35A0A1B0GVV1 85 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 OR2A25A4D2G3 310 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 ZNF197O14709 1029 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 PRPS2P11908 318 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 CKMT1AP12532 417 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 PRKACBP22694 351 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 TNFSF8P32971 234 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 PTGER3P43115 390 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 SLC11A2P49281 568 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 VMACQ2NL98 169 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 IQCCQ4KMZ1 466 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 DPY19L3Q6ZPD9 716 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 C16orf59Q7L2K0 433 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 C8orf48Q96LL4 319 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 CLEC4MQ9H2X3 399 aaPredicted RBP12.67□□□□□ -0.38
TRIM35-201ENST00000305364 COQ3Q9NZJ6 369 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 PGAP2Q9UHJ9 254 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 PIPSLA2A3N6 862 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 MEIS3P2A8K0S8 358 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 KMOO15229 486 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 USP2O75604 605 aaPredicted RBP12.67□□□□□ -0.38
TRIM35-201ENST00000305364 ALX3O95076 343 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 MYL12AP19105 171 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 ITPKAP23677 461 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 RPL34P49207 117 aaKnown RBP12.67□□□□□ -0.38
TRIM35-201ENST00000305364 RFPL4BQ6ZWI9 263 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 GPR156Q8NFN8 814 aa12.67□□□□□ -0.38
TRIM35-201ENST00000305364 VANGL1Q8TAA9 524 aaPredicted RBP12.67□□□□□ -0.38
TRIM35-201ENST00000305364 COPS8Q99627 209 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms