RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 RBBP7Q16576 425 aa26.11■■□□□ 1.77
HDAC3-201ENST00000305264 ATG14Q6ZNE5 492 aa26.11■■□□□ 1.77
HDAC3-201ENST00000305264 DPH7Q9BTV6 452 aa26.11■■□□□ 1.77
HDAC3-201ENST00000305264 PCDHGA1Q9Y5H4 931 aa26.11■■□□□ 1.77
HDAC3-201ENST00000305264 KATNA1O75449 491 aa26.1■■□□□ 1.77
HDAC3-201ENST00000305264 RASSF9O75901 435 aa26.1■■□□□ 1.77
HDAC3-201ENST00000305264 ST6GAL1P15907 406 aa26.1■■□□□ 1.77
HDAC3-201ENST00000305264 GRIA3P42263 894 aa26.1■■□□□ 1.77
HDAC3-201ENST00000305264 TRAF3Q13114 568 aa26.1■■□□□ 1.77
HDAC3-201ENST00000305264 FAM219BQ5XKK7 198 aa26.1■■□□□ 1.77
HDAC3-201ENST00000305264 SLCO4C1Q6ZQN7 724 aa26.1■■□□□ 1.77
HDAC3-201ENST00000305264 SLCO6A1Q86UG4 719 aa26.1■■□□□ 1.77
HDAC3-201ENST00000305264 OR4D9Q8NGE8 314 aa26.1■■□□□ 1.77
HDAC3-201ENST00000305264 CDK15Q96Q40 435 aa26.1■■□□□ 1.77
HDAC3-201ENST00000305264 CD180Q99467 661 aa26.1■■□□□ 1.77
HDAC3-201ENST00000305264 IGHV5-51A0A0C4DH38 117 aa26.09■■□□□ 1.77
HDAC3-201ENST00000305264 H7BY64 318 aa26.09■■□□□ 1.77
HDAC3-201ENST00000305264 UBFD1O14562 309 aaKnown RBP26.09■■□□□ 1.77
HDAC3-201ENST00000305264 PRAMEF10O60809 474 aa26.09■■□□□ 1.77
HDAC3-201ENST00000305264 H2AFYO75367 372 aaKnown RBP26.09■■□□□ 1.77
HDAC3-201ENST00000305264 VARSP26640 1264 aaKnown RBP26.09■■□□□ 1.77
HDAC3-201ENST00000305264 LCP2Q13094 533 aa26.09■■□□□ 1.77
HDAC3-201ENST00000305264 RCN2Q14257 317 aa26.09■■□□□ 1.77
HDAC3-201ENST00000305264 PRAP1Q96NZ9 151 aa26.09■■□□□ 1.77
HDAC3-201ENST00000305264 SEMA6CQ9H3T2 930 aa26.09■■□□□ 1.77
HDAC3-201ENST00000305264 C1GALT1Q9NS00 363 aa26.09■■□□□ 1.77
HDAC3-201ENST00000305264 CLGNO14967 610 aa26.09■■□□□ 1.77
HDAC3-201ENST00000305264 NPHS1O60500 1241 aa26.09■■□□□ 1.77
HDAC3-201ENST00000305264 CHRNGP07510 517 aa26.09■■□□□ 1.77
HDAC3-201ENST00000305264 NOVA1P51513 510 aaKnown RBP26.09■■□□□ 1.77
HDAC3-201ENST00000305264 CCNG1P51959 295 aa26.09■■□□□ 1.77
HDAC3-201ENST00000305264 PDX1P52945 283 aa26.09■■□□□ 1.77
HDAC3-201ENST00000305264 SIM1P81133 766 aaPredicted RBP26.09■■□□□ 1.77
HDAC3-201ENST00000305264 BST1Q10588 318 aa26.09■■□□□ 1.77
HDAC3-201ENST00000305264 CHIT1Q13231 466 aa26.09■■□□□ 1.77
HDAC3-201ENST00000305264 ZIC1Q15915 447 aa26.09■■□□□ 1.77
HDAC3-201ENST00000305264 RSPO4Q2I0M5 234 aaPredicted RBP26.09■■□□□ 1.77
HDAC3-201ENST00000305264 CACHD1Q5VU97 1274 aa26.09■■□□□ 1.77
HDAC3-201ENST00000305264 LSMEM2Q8N112 164 aa26.09■■□□□ 1.77
HDAC3-201ENST00000305264 ABHD11Q8NFV4 315 aa26.09■■□□□ 1.77
HDAC3-201ENST00000305264 PRR11Q96HE9 360 aaPredicted RBP26.09■■□□□ 1.77
HDAC3-201ENST00000305264 CNDP1Q96KN2 507 aa26.09■■□□□ 1.77
HDAC3-201ENST00000305264 TRAPPC9Q96Q05 1148 aa26.09■■□□□ 1.77
HDAC3-201ENST00000305264 SHCBP1LQ9BZQ2 653 aa26.09■■□□□ 1.77
HDAC3-201ENST00000305264 SPNS1Q9H2V7 528 aa26.09■■□□□ 1.77
HDAC3-201ENST00000305264 ZNF395Q9H8N7 513 aaPredicted RBP26.09■■□□□ 1.77
HDAC3-201ENST00000305264 ZNF225Q9UK10 706 aa26.09■■□□□ 1.77
HDAC3-201ENST00000305264 IGHV5-10-1A0A0J9YXX1 117 aa26.08■■□□□ 1.77
HDAC3-201ENST00000305264 SLC9B1P1A6NJY1 282 aa26.08■■□□□ 1.77
HDAC3-201ENST00000305264 LYPLA1O75608 230 aaPredicted RBP26.08■■□□□ 1.77
HDAC3-201ENST00000305264 FKBP9O95302 570 aa26.08■■□□□ 1.77
HDAC3-201ENST00000305264 FTH1P19P0C7X4 201 aa26.08■■□□□ 1.77
HDAC3-201ENST00000305264 CD22P20273 847 aa26.08■■□□□ 1.77
HDAC3-201ENST00000305264 ARL1P40616 181 aaPredicted RBP26.08■■□□□ 1.77
HDAC3-201ENST00000305264 CLDN6P56747 220 aa26.08■■□□□ 1.77
HDAC3-201ENST00000305264 INSM1Q01101 510 aaPredicted RBP26.08■■□□□ 1.77
HDAC3-201ENST00000305264 MEF2AQ02078 507 aaPredicted RBP26.08■■□□□ 1.77
HDAC3-201ENST00000305264 CLPPQ16740 277 aaPredicted RBP26.08■■□□□ 1.77
HDAC3-201ENST00000305264 XKR6Q5GH73 641 aa26.08■■□□□ 1.77
HDAC3-201ENST00000305264 FCRL6Q6DN72 434 aa26.08■■□□□ 1.77
HDAC3-201ENST00000305264 NXPE4Q6UWF7 544 aa26.08■■□□□ 1.77
HDAC3-201ENST00000305264 ADCK2Q7Z695 626 aa26.08■■□□□ 1.77
HDAC3-201ENST00000305264 B3GNT8Q7Z7M8 397 aa26.08■■□□□ 1.77
HDAC3-201ENST00000305264 SLITRK4Q8IW52 837 aa26.08■■□□□ 1.77
HDAC3-201ENST00000305264 WDR48Q8TAF3 677 aa26.08■■□□□ 1.77
HDAC3-201ENST00000305264 ATP6V1E2Q96A05 226 aa26.08■■□□□ 1.77
HDAC3-201ENST00000305264 CAPS2Q9BXY5 557 aa26.08■■□□□ 1.77
HDAC3-201ENST00000305264 DRC3Q9H069 523 aa26.08■■□□□ 1.77
HDAC3-201ENST00000305264 MANSC1Q9H8J5 431 aa26.08■■□□□ 1.77
HDAC3-201ENST00000305264 ADAMTS20P59510 1910 aa26.08■■□□□ 1.77
HDAC3-201ENST00000305264 A8MU76 341 aa26.07■■□□□ 1.76
HDAC3-201ENST00000305264 ITM2AO43736 263 aa26.07■■□□□ 1.76
HDAC3-201ENST00000305264 MLYCDO95822 493 aa26.07■■□□□ 1.76
HDAC3-201ENST00000305264 THRAP10827 490 aa26.07■■□□□ 1.76
HDAC3-201ENST00000305264 CEACAM1P13688 526 aa26.07■■□□□ 1.76
HDAC3-201ENST00000305264 NAA20P61599 178 aa26.07■■□□□ 1.76
HDAC3-201ENST00000305264 E2F1Q01094 437 aa26.07■■□□□ 1.76
HDAC3-201ENST00000305264 IRF8Q02556 426 aa26.07■■□□□ 1.76
HDAC3-201ENST00000305264 DOC2AQ14183 400 aa26.07■■□□□ 1.76
HDAC3-201ENST00000305264 ARL13AQ5H913 290 aaPredicted RBP26.07■■□□□ 1.76
HDAC3-201ENST00000305264 ZNF425Q6IV72 752 aa26.07■■□□□ 1.76
HDAC3-201ENST00000305264 DHRS13Q6UX07 377 aa26.07■■□□□ 1.76
HDAC3-201ENST00000305264 PRSS42Q7Z5A4 293 aa26.07■■□□□ 1.76
HDAC3-201ENST00000305264 ZNF382Q96SR6 550 aa26.07■■□□□ 1.76
HDAC3-201ENST00000305264 DPYSL5Q9BPU6 564 aa26.07■■□□□ 1.76
HDAC3-201ENST00000305264 C20orf27Q9GZN8 174 aa26.07■■□□□ 1.76
HDAC3-201ENST00000305264 ACTR8Q9H981 624 aa26.07■■□□□ 1.76
HDAC3-201ENST00000305264 PDP2Q9P2J9 529 aa26.07■■□□□ 1.76
HDAC3-201ENST00000305264 GRK2P25098 689 aa26.07■■□□□ 1.76
HDAC3-201ENST00000305264 GUCY1A3Q02108 690 aa26.07■■□□□ 1.76
HDAC3-201ENST00000305264 ATG9BQ674R7 924 aa26.07■■□□□ 1.76
HDAC3-201ENST00000305264 LETMD1Q6P1Q0 360 aa26.07■■□□□ 1.76
HDAC3-201ENST00000305264 FIGLAQ6QHK4 219 aa26.07■■□□□ 1.76
HDAC3-201ENST00000305264 SYVN1Q86TM6 617 aa26.07■■□□□ 1.76
HDAC3-201ENST00000305264 C19orf47Q8N9M1 422 aaKnown RBP26.07■■□□□ 1.76
HDAC3-201ENST00000305264 AGAP11Q8TF27 550 aa26.07■■□□□ 1.76
HDAC3-201ENST00000305264 CKAP2Q8WWK9 683 aa26.07■■□□□ 1.76
HDAC3-201ENST00000305264 ZNF75CPQ92670 426 aaPredicted RBP26.07■■□□□ 1.76
HDAC3-201ENST00000305264 CCDC74BQ96LY2 380 aa26.07■■□□□ 1.76
HDAC3-201ENST00000305264 PLCD4Q9BRC7 762 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms