RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 NEIL2Q969S2 332 aa18.78■□□□□ 0.6
HOXC4-201ENST00000303406 UBE2E3Q969T4 207 aa18.78■□□□□ 0.6
HOXC4-201ENST00000303406 PPWD1Q96BP3 646 aaKnown RBP18.78■□□□□ 0.6
HOXC4-201ENST00000303406 BIRC7Q96CA5 298 aa18.78■□□□□ 0.6
HOXC4-201ENST00000303406 CENPNQ96H22 339 aaPredicted RBP18.78■□□□□ 0.6
HOXC4-201ENST00000303406 TSSK3Q96PN8 268 aa18.78■□□□□ 0.6
HOXC4-201ENST00000303406 CPPED1Q9BRF8 314 aaPredicted RBP18.78■□□□□ 0.6
HOXC4-201ENST00000303406 RPF2Q9H7B2 306 aaKnown RBP18.78■□□□□ 0.6
HOXC4-201ENST00000303406 COQ10BQ9H8M1 238 aa18.78■□□□□ 0.6
HOXC4-201ENST00000303406 ZDHHC4Q9NPG8 344 aa18.78■□□□□ 0.6
HOXC4-201ENST00000303406 CCDC177Q9NQR7 707 aaPredicted RBP18.78■□□□□ 0.6
HOXC4-201ENST00000303406 AURKCQ9UQB9 309 aa18.78■□□□□ 0.6
HOXC4-201ENST00000303406 AP4B1Q9Y6B7 739 aa18.78■□□□□ 0.6
HOXC4-201ENST00000303406 ANTXRLA6NF34 631 aa18.77■□□□□ 0.6
HOXC4-201ENST00000303406 SCELO95171 688 aa18.77■□□□□ 0.6
HOXC4-201ENST00000303406 PCDH8O95206 1070 aa18.77■□□□□ 0.6
HOXC4-201ENST00000303406 C7P10643 843 aa18.77■□□□□ 0.6
HOXC4-201ENST00000303406 MTHFD1P11586 935 aaKnown RBP18.77■□□□□ 0.6
HOXC4-201ENST00000303406 KIR3DL1P43629 444 aa18.77■□□□□ 0.6
HOXC4-201ENST00000303406 HIST2H2ACQ16777 129 aaPredicted RBP18.77■□□□□ 0.6
HOXC4-201ENST00000303406 METRNLQ641Q3 311 aa18.77■□□□□ 0.6
HOXC4-201ENST00000303406 HIST2H2AA3Q6FI13 130 aa18.77■□□□□ 0.6
HOXC4-201ENST00000303406 FAM83HQ6ZRV2 1179 aaPredicted RBP18.77■□□□□ 0.6
HOXC4-201ENST00000303406 FKBP9P1Q75LS8 142 aa18.77■□□□□ 0.6
HOXC4-201ENST00000303406 CALHM3Q86XJ0 350 aa18.77■□□□□ 0.6
HOXC4-201ENST00000303406 SYT12Q8IV01 421 aa18.77■□□□□ 0.6
HOXC4-201ENST00000303406 TP53I13Q8NBR0 393 aaPredicted RBP18.77■□□□□ 0.6
HOXC4-201ENST00000303406 ZNF548Q8NEK5 533 aaPredicted RBP18.77■□□□□ 0.6
HOXC4-201ENST00000303406 OR8J2Q8NGG1 315 aa18.77■□□□□ 0.6
HOXC4-201ENST00000303406 CHTF18Q8WVB6 975 aa18.77■□□□□ 0.6
HOXC4-201ENST00000303406 SLC5A11Q8WWX8 675 aa18.77■□□□□ 0.6
HOXC4-201ENST00000303406 NELL1Q92832 810 aa18.77■□□□□ 0.6
HOXC4-201ENST00000303406 HAUS8Q9BT25 410 aa18.77■□□□□ 0.6
HOXC4-201ENST00000303406 OSBPL11Q9BXB4 747 aa18.77■□□□□ 0.6
HOXC4-201ENST00000303406 RMI1Q9H9A7 625 aa18.77■□□□□ 0.6
HOXC4-201ENST00000303406 FAM120CQ9NX05 1096 aaKnown RBP18.77■□□□□ 0.6
HOXC4-201ENST00000303406 LMCD1Q9NZU5 365 aa18.77■□□□□ 0.6
HOXC4-201ENST00000303406 SPATA7Q9P0W8 599 aa18.77■□□□□ 0.6
HOXC4-201ENST00000303406 TMEM98Q9Y2Y6 226 aa18.77■□□□□ 0.6
HOXC4-201ENST00000303406 KCNJ13O60928 360 aa18.76■□□□□ 0.59
HOXC4-201ENST00000303406 PTPN6P29350 595 aa18.76■□□□□ 0.59
HOXC4-201ENST00000303406 NTSR1P30989 418 aa18.76■□□□□ 0.59
HOXC4-201ENST00000303406 WASP42768 502 aa18.76■□□□□ 0.59
HOXC4-201ENST00000303406 RPS21P63220 83 aaKnown RBP18.76■□□□□ 0.59
HOXC4-201ENST00000303406 GALNT18Q6P9A2 607 aa18.76■□□□□ 0.59
HOXC4-201ENST00000303406 NXPE4Q6UWF7 544 aa18.76■□□□□ 0.59
HOXC4-201ENST00000303406 UGT2A3Q6UWM9 527 aa18.76■□□□□ 0.59
HOXC4-201ENST00000303406 CAMKMTQ7Z624 323 aa18.76■□□□□ 0.59
HOXC4-201ENST00000303406 TMPRSS11BQ86T26 416 aa18.76■□□□□ 0.59
HOXC4-201ENST00000303406 RALGPS2Q86X27 583 aaPredicted RBP18.76■□□□□ 0.59
HOXC4-201ENST00000303406 DTWD1Q8N5C7 304 aa18.76■□□□□ 0.59
HOXC4-201ENST00000303406 HUS1BQ8NHY5 278 aa18.76■□□□□ 0.59
HOXC4-201ENST00000303406 CXorf40BQ96DE9 158 aa18.76■□□□□ 0.59
HOXC4-201ENST00000303406 GBP5Q96PP8 586 aa18.76■□□□□ 0.59
HOXC4-201ENST00000303406 RPP25Q9BUL9 199 aaKnown RBP18.76■□□□□ 0.59
HOXC4-201ENST00000303406 C9orf16Q9BUW7 83 aa18.76■□□□□ 0.59
HOXC4-201ENST00000303406 C1QTNF2Q9BXJ5 285 aa18.76■□□□□ 0.59
HOXC4-201ENST00000303406 SEMA6AQ9H2E6 1030 aa18.76■□□□□ 0.59
HOXC4-201ENST00000303406 PHPT1Q9NRX4 125 aaPredicted RBP18.76■□□□□ 0.59
HOXC4-201ENST00000303406 DLGAP2Q9P1A6 1054 aa18.76■□□□□ 0.59
HOXC4-201ENST00000303406 ACSL5Q9ULC5 683 aa18.76■□□□□ 0.59
HOXC4-201ENST00000303406 A0A1W2PP55 124 aa18.75■□□□□ 0.59
HOXC4-201ENST00000303406 ANHXE9PGG2 379 aa18.75■□□□□ 0.59
HOXC4-201ENST00000303406 TXNDC9O14530 226 aa18.75■□□□□ 0.59
HOXC4-201ENST00000303406 PLRG1O43660 514 aaKnown RBP18.75■□□□□ 0.59
HOXC4-201ENST00000303406 UBTFL6P0CB48 400 aaPredicted RBP18.75■□□□□ 0.59
HOXC4-201ENST00000303406 NCK1P16333 377 aa18.75■□□□□ 0.59
HOXC4-201ENST00000303406 OXTRP30559 389 aa18.75■□□□□ 0.59
HOXC4-201ENST00000303406 CHN2P52757 468 aa18.75■□□□□ 0.59
HOXC4-201ENST00000303406 PRKCQQ04759 706 aa18.75■□□□□ 0.59
HOXC4-201ENST00000303406 LRRC74AQ0VAA2 488 aa18.75■□□□□ 0.59
HOXC4-201ENST00000303406 STARD3Q14849 445 aa18.75■□□□□ 0.59
HOXC4-201ENST00000303406 ATP6AP1Q15904 470 aa18.75■□□□□ 0.59
HOXC4-201ENST00000303406 SDE2Q6IQ49 451 aa18.75■□□□□ 0.59
HOXC4-201ENST00000303406 LPCAT2Q7L5N7 544 aa18.75■□□□□ 0.59
HOXC4-201ENST00000303406 SPRED1Q7Z699 444 aa18.75■□□□□ 0.59
HOXC4-201ENST00000303406 AMIGO2Q86SJ2 522 aa18.75■□□□□ 0.59
HOXC4-201ENST00000303406 MFSD2AQ8NA29 543 aa18.75■□□□□ 0.59
HOXC4-201ENST00000303406 EZH1Q92800 747 aaPredicted RBP18.75■□□□□ 0.59
HOXC4-201ENST00000303406 NECTIN4Q96NY8 510 aa18.75■□□□□ 0.59
HOXC4-201ENST00000303406 MTERF1Q99551 399 aaKnown RBP18.75■□□□□ 0.59
HOXC4-201ENST00000303406 THUMPD3Q9BV44 507 aaKnown RBP18.75■□□□□ 0.59
HOXC4-201ENST00000303406 WDR26Q9H7D7 661 aa18.75■□□□□ 0.59
HOXC4-201ENST00000303406 KAT8Q9H7Z6 458 aaKnown RBP18.75■□□□□ 0.59
HOXC4-201ENST00000303406 YY1AP1Q9H869 796 aa18.75■□□□□ 0.59
HOXC4-201ENST00000303406 SCML1Q9UN30 329 aa18.75■□□□□ 0.59
HOXC4-201ENST00000303406 ASF1AQ9Y294 204 aa18.75■□□□□ 0.59
HOXC4-201ENST00000303406 PCDHB14Q9Y5E9 798 aa18.75■□□□□ 0.59
HOXC4-201ENST00000303406 ELOVL7A1L3X0 281 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 MAGEB17A8MXT2 336 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 IL1RNP18510 177 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 PIK3CBP42338 1070 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 CCT8P50990 548 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 GZMMP51124 257 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 PHEXP78562 749 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 ABHD18Q0P651 414 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 HTR4Q13639 388 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 SLBPQ14493 270 aaKnown RBP eCLIP18.74■□□□□ 0.59
HOXC4-201ENST00000303406 IRF4Q15306 451 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 UGT8Q16880 541 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms