RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 PPP1R16AQ96I34 528 aa14.1□□□□□ -0.15
SMG8-201ENST00000300917 SORBS1Q9BX66 1292 aaKnown RBP14.1□□□□□ -0.15
SMG8-201ENST00000300917 TMEM245Q9H330 911 aa14.1□□□□□ -0.15
SMG8-201ENST00000300917 KCNE2Q9Y6J6 123 aa14.1□□□□□ -0.15
SMG8-201ENST00000300917 DGKBQ9Y6T7 804 aa14.1□□□□□ -0.15
SMG8-201ENST00000300917 ALPK3Q96L96 1907 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 YY2O15391 372 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 LAMP1P11279 417 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 KIR3DL1P43629 444 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 C16orf72Q14CZ0 275 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 CHST15Q7LFX5 561 aaPredicted RBP14.09□□□□□ -0.15
SMG8-201ENST00000300917 FAM124AQ86V42 546 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 CMTM7Q96FZ5 175 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 ZNF597Q96LX8 424 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 VPS35Q96QK1 796 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 MBNL1Q9NR56 388 aaKnown RBP14.09□□□□□ -0.15
SMG8-201ENST00000300917 ERVK-11Q9UQG0 969 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 ELOVL7A1L3X0 281 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 EIF3FO00303 357 aaPredicted RBP14.09□□□□□ -0.15
SMG8-201ENST00000300917 GNGT2O14610 69 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 SNAP29O95721 258 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 ZNF682O95780 498 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 CLPTM1O96005 669 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 ANXA4P09525 319 aaPredicted RBP14.09□□□□□ -0.15
SMG8-201ENST00000300917 SMIM18P0DKX4 95 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 BMP2P12643 396 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 AQP1P29972 269 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 RTL10Q7L3V2 364 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 STK32CQ86UX6 486 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 PTRH1Q86Y79 214 aaKnown RBP14.09□□□□□ -0.15
SMG8-201ENST00000300917 FAM20CQ8IXL6 584 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 ZNF786Q8N393 782 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 AADATQ8N5Z0 425 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 NETO1Q8TDF5 533 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 PAIP1Q9H074 479 aaKnown RBP14.09□□□□□ -0.15
SMG8-201ENST00000300917 SLC28A3Q9HAS3 691 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 SERHLQ9NQF3 203 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 RAD18Q9NS91 495 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 PCDHB3Q9Y5E6 796 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 CXorf51AA0A1B0GTR3 108 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 CXCR6O00574 342 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 SLC16A5O15375 505 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 KIF1CO43896 1103 aaKnown RBP14.09□□□□□ -0.15
SMG8-201ENST00000300917 DIRAS1O95057 198 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 GPIP06744 558 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 PRKACGP22612 351 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 CCT8P50990 548 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 MC1RQ01726 317 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 CHRNB3Q05901 458 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 DLX2Q07687 328 aaPredicted RBP14.09□□□□□ -0.15
SMG8-201ENST00000300917 UGT8Q16880 541 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 LIN52Q52LA3 116 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 ZCCHC8Q6NZY4 707 aaKnown RBP14.09□□□□□ -0.15
SMG8-201ENST00000300917 HDDC3Q8N4P3 179 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 ANKFN1Q8N957 763 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 SNX19Q92543 992 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 NMD3Q96D46 503 aaKnown RBP14.09□□□□□ -0.15
SMG8-201ENST00000300917 TSC22D3Q99576 134 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 TRIM39Q9HCM9 518 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 MAGEL2Q9UJ55 1249 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 STON1Q9Y6Q2 735 aa14.09□□□□□ -0.15
SMG8-201ENST00000300917 C1QTNF3-AMACRE9PGA6 284 aa14.08□□□□□ -0.16
SMG8-201ENST00000300917 FPGTO14772 594 aa14.08□□□□□ -0.16
SMG8-201ENST00000300917 GGT1P19440 569 aa14.08□□□□□ -0.16
SMG8-201ENST00000300917 HNF4AP41235 474 aa14.08□□□□□ -0.16
SMG8-201ENST00000300917 TMEM31Q5JXX7 168 aa14.08□□□□□ -0.16
SMG8-201ENST00000300917 ZNF551Q7Z340 670 aaPredicted RBP14.08□□□□□ -0.16
SMG8-201ENST00000300917 ZNF548Q8NEK5 533 aaPredicted RBP14.08□□□□□ -0.16
SMG8-201ENST00000300917 TMIEQ8NEW7 156 aa14.08□□□□□ -0.16
SMG8-201ENST00000300917 OR4K1Q8NGD4 311 aa14.08□□□□□ -0.16
SMG8-201ENST00000300917 UHRF1Q96T88 793 aaPredicted RBP14.08□□□□□ -0.16
SMG8-201ENST00000300917 NOBOXO60393 691 aa14.08□□□□□ -0.16
SMG8-201ENST00000300917 SERPINA1P01009 418 aa14.08□□□□□ -0.16
SMG8-201ENST00000300917 PSMB5P28074 263 aa14.08□□□□□ -0.16
SMG8-201ENST00000300917 MTHFRP42898 656 aa14.08□□□□□ -0.16
SMG8-201ENST00000300917 YAP1P46937 504 aaKnown RBP14.08□□□□□ -0.16
SMG8-201ENST00000300917 SPIDRQ14159 915 aa14.08□□□□□ -0.16
SMG8-201ENST00000300917 RUNDC3AQ59EK9 446 aa14.08□□□□□ -0.16
SMG8-201ENST00000300917 SYCE2Q6PIF2 218 aa14.08□□□□□ -0.16
SMG8-201ENST00000300917 PLD3Q8IV08 490 aa14.08□□□□□ -0.16
SMG8-201ENST00000300917 CHERPQ8IWX8 916 aaKnown RBP14.08□□□□□ -0.16
SMG8-201ENST00000300917 GLB1L3Q8NCI6 653 aaPredicted RBP14.08□□□□□ -0.16
SMG8-201ENST00000300917 ATL1Q8WXF7 558 aa14.08□□□□□ -0.16
SMG8-201ENST00000300917 MYO15AQ9UKN7 3530 aa14.08□□□□□ -0.16
SMG8-201ENST00000300917 VCANP13611 3396 aa14.08□□□□□ -0.16
SMG8-201ENST00000300917 ZNF106Q9H2Y7 1883 aaKnown RBP14.08□□□□□ -0.16
SMG8-201ENST00000300917 LILRB5O75023 590 aa14.07□□□□□ -0.16
SMG8-201ENST00000300917 TCF3P15923 654 aa14.07□□□□□ -0.16
SMG8-201ENST00000300917 NPPBP16860 134 aa14.07□□□□□ -0.16
SMG8-201ENST00000300917 DRD3P35462 400 aa14.07□□□□□ -0.16
SMG8-201ENST00000300917 MRPL19P49406 292 aaKnown RBP14.07□□□□□ -0.16
SMG8-201ENST00000300917 IL1RL1Q01638 556 aa14.07□□□□□ -0.16
SMG8-201ENST00000300917 WSCD2Q2TBF2 565 aa14.07□□□□□ -0.16
SMG8-201ENST00000300917 CAPN13Q6MZZ7 669 aaPredicted RBP14.07□□□□□ -0.16
SMG8-201ENST00000300917 PPP4R4Q6NUP7 873 aa14.07□□□□□ -0.16
SMG8-201ENST00000300917 KIAA1211LQ6NV74 962 aa14.07□□□□□ -0.16
SMG8-201ENST00000300917 TMEM126BQ8IUX1 230 aa14.07□□□□□ -0.16
SMG8-201ENST00000300917 CPA6Q8N4T0 437 aa14.07□□□□□ -0.16
SMG8-201ENST00000300917 WDR20Q8TBZ3 569 aa14.07□□□□□ -0.16
SMG8-201ENST00000300917 TMBIM1Q969X1 311 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms