RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 DEFA5Q01523 94 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 RPL6Q02878 288 aaKnown RBP13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 MERTKQ12866 999 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PRKD1Q15139 912 aaPredicted RBP13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 MLIPQ5VWP3 458 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 P4HA3Q7Z4N8 544 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 THOC6Q86W42 341 aaKnown RBP13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CEP97Q8IW35 865 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 METTL8Q9H825 291 aaKnown RBP13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PEX16Q9Y5Y5 336 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 HEBP2Q9Y5Z4 205 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 HS3ST4Q9Y661 456 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 OR2AT4A6NND4 320 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CLIC1O00299 241 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 SLC7A4O43246 635 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CDC40O60508 579 aaKnown RBP eCLIP13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PRKD3O94806 890 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 OGNP20774 298 aaKnown RBP13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 IMPDH1P20839 514 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 OR3A3P47888 321 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 OR3A2P47893 321 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 MLLT1Q03111 559 aaPredicted RBP13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 DSC3Q14574 896 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 FBXL22Q6P050 247 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CANT1Q8WVQ1 401 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TRIM43Q96BQ3 446 aaPredicted RBP13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TM9SF2Q99805 663 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 BEX2Q9BXY8 128 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 BEX1Q9HBH7 125 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 VPS29Q9UBQ0 182 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 NKX1-2Q9UD57 310 aaPredicted RBP13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 GNG8Q9UK08 70 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 LOC730098B7Z3J9 87 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ARFRP1Q13795 201 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ENPP2Q13822 863 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 FAM92BQ6ZTR7 304 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 SYVN1Q86TM6 617 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 NAT8LQ8N9F0 302 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 SLAIN1Q8ND83 568 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 OR9I1Q8NGQ6 314 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 DOK4Q8TEW6 326 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 SGCDQ92629 289 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TTYH3Q9C0H2 523 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 HPF1Q9NWY4 346 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 VNN3Q9NY84 501 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 RIMBP3CA6NJZ7 1639 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 RIMBP3BA6NNM3 1639 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 RIMBP3Q9UFD9 1639 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 GPR89AB7ZAQ6 455 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 AOC2O75106 756 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 GPR89BP0CG08 455 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 RAB8AP61006 207 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PTP4A2Q12974 167 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 KLHDC10Q6PID8 442 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 LSM14AQ8ND56 463 aaKnown RBP13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 FAM46DQ8NEK8 389 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 OR2L8Q8NGY9 312 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ZNF347Q96SE7 839 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ADAM7Q9H2U9 754 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TFB2MQ9H5Q4 396 aaKnown RBP13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 RNF11Q9Y3C5 154 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 MAU2Q9Y6X3 613 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TMEM150CB9EJG8 249 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PLOD2O00469 737 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ZNF16P17020 682 aaPredicted RBP13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TYRP1P17643 537 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 GBX2P52951 348 aaPredicted RBP13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TRIM74Q86UV6 250 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ZSCAN5AQ9BUG6 496 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 IRF2BPLQ9H1B7 796 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 MINDY3Q9H8M7 445 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 OXSMQ9NWU1 459 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 J3QRK9 145 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ATP1B2P14415 290 aaPredicted RBP13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ERVK-8P63133 956 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CRHR2Q13324 411 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 RIN1Q13671 783 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TSTD1Q8NFU3 115 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 OR4F6Q8NGB9 312 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CCM2Q9BSQ5 444 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 UPB1Q9UBR1 384 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 FBXL3Q9UKT7 428 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 FER1L4A9Z1Z3 1794 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TMEM131LA2VDJ0 1609 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 A0A0G2JLL6 359 aaPredicted RBP13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 HYKKA2RU49 373 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 BLOC1S5-TXNDC5H3BN57 136 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PDCD5O14737 125 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CYP11A1P05108 521 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 SLC2A2P11168 524 aaPredicted RBP13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 VARSP26640 1264 aaKnown RBP13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 RPS3AP61247 264 aaKnown RBP13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 GPM6BQ13491 265 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 DPYSL2Q16555 572 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PRRT2Q7Z6L0 340 aaPredicted RBP13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TUBGCP5Q96RT8 1024 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PCBD2Q9H0N5 130 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 KLRF1Q9NZS2 232 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PLEKHA6Q9Y2H5 1048 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 A8MV72 311 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms