RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 ITGA3P26006 1051 aa13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 SKIV2L2P42285 1042 aaKnown RBP13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 ARF3P61204 181 aaPredicted RBP13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 TAP2Q03519 686 aa13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 CUL1Q13616 776 aa13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 PTK6Q13882 451 aa13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 RBBP7Q16576 425 aa13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 PRTGQ2VWP7 1150 aa13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 PLEKHN1Q494U1 663 aaPredicted RBP13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 HSP90AA5PQ58FG0 334 aa13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 RNASEH2BQ5TBB1 312 aaKnown RBP13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 FHL5Q5TD97 284 aa13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 IRAK1BP1Q5VVH5 260 aa13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 PRAMEF13Q5VWM6 474 aa13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 ICE2Q659A1 982 aa13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 LRRC8EQ6NSJ5 796 aa13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 UGT3A1Q6NUS8 523 aa13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 KIRREL2Q6UWL6 708 aa13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 CYHR1Q6ZMK1 362 aa13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 PCGF5Q86SE9 256 aa13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 PAQR7Q86WK9 346 aa13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 IQCKQ8N0W5 287 aa13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 AGGF1Q8N302 714 aaeCLIP13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 METTL27Q8N6F8 245 aaPredicted RBP13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 GIMAP7Q8NHV1 300 aa13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 STT3BQ8TCJ2 826 aa13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 ZNF480Q8WV37 535 aa13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 MIEF2Q96C03 454 aa13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 MVB12AQ96EY5 273 aa13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 GPR21Q99679 349 aa13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 EBNA1BP2Q99848 306 aaKnown RBP13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 NAT9Q9BTE0 207 aa13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 SLC29A3Q9BZD2 475 aa13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 LUZP4Q9P127 313 aa13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 TAC3Q9UHF0 121 aa13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 SNRNP200O75643 2136 aaKnown RBP13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 PTPN13Q12923 2485 aa13.24□□□□□ -0.29
TMEM41B-201ENST00000299596 IGKV1-8A0A0C4DH67 115 aa13.23□□□□□ -0.29
TMEM41B-201ENST00000299596 FER1L5A0AVI2 2057 aa13.23□□□□□ -0.29
TMEM41B-201ENST00000299596 MASP2O00187 686 aa13.23□□□□□ -0.29
TMEM41B-201ENST00000299596 SMAPO00193 183 aa13.23□□□□□ -0.29
TMEM41B-201ENST00000299596 PRPF4O43172 522 aaKnown RBP eCLIP13.23□□□□□ -0.29
TMEM41B-201ENST00000299596 MED26O95402 600 aa13.23□□□□□ -0.29
TMEM41B-201ENST00000299596 TTC4O95801 387 aa13.23□□□□□ -0.29
TMEM41B-201ENST00000299596 ZGLP1P0C6A0 271 aa13.23□□□□□ -0.29
TMEM41B-201ENST00000299596 EZRP15311 586 aaKnown RBP13.23□□□□□ -0.29
TMEM41B-201ENST00000299596 UQCRFS1P47985 274 aa13.23□□□□□ -0.29
TMEM41B-201ENST00000299596 TUBB8Q3ZCM7 444 aa13.23□□□□□ -0.29
TMEM41B-201ENST00000299596 GARNL3Q5VVW2 1013 aa13.23□□□□□ -0.29
TMEM41B-201ENST00000299596 ZNF425Q6IV72 752 aa13.23□□□□□ -0.29
TMEM41B-201ENST00000299596 SHISA6Q6ZSJ9 500 aa13.23□□□□□ -0.29
TMEM41B-201ENST00000299596 KCNMB4Q86W47 210 aa13.23□□□□□ -0.29
TMEM41B-201ENST00000299596 CSNK1A1LQ8N752 337 aa13.23□□□□□ -0.29
TMEM41B-201ENST00000299596 CD200R1Q8TD46 325 aa13.23□□□□□ -0.29
TMEM41B-201ENST00000299596 RERGQ96A58 199 aaPredicted RBP13.23□□□□□ -0.29
TMEM41B-201ENST00000299596 CABS1Q96KC9 395 aa13.23□□□□□ -0.29
TMEM41B-201ENST00000299596 OR2A5Q96R48 311 aa13.23□□□□□ -0.29
TMEM41B-201ENST00000299596 AARSD1Q9BTE6 412 aaKnown RBP13.23□□□□□ -0.29
TMEM41B-201ENST00000299596 CRB3Q9BUF7 120 aa13.23□□□□□ -0.29
TMEM41B-201ENST00000299596 IARS2Q9NSE4 1012 aaKnown RBP13.23□□□□□ -0.29
TMEM41B-201ENST00000299596 MAP10Q9P2G4 905 aa13.23□□□□□ -0.29
TMEM41B-201ENST00000299596 ASIC3Q9UHC3 531 aa13.23□□□□□ -0.29
TMEM41B-201ENST00000299596 IGLV3-12A0A075B6K2 115 aa13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 DNALI1O14645 258 aaPredicted RBP13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 F7P08709 466 aaPredicted RBP13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 FBLP22087 321 aaKnown RBP13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 HRH2P25021 359 aa13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 MPP1Q00013 466 aa13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 KLC1Q07866 573 aa13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 CRYMQ14894 314 aa13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 PRR30Q53SZ7 412 aaPredicted RBP13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 THEMIS2Q5TEJ8 643 aa13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 AGAP7PQ5VUJ5 663 aa13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 Q6ZS92 163 aa13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 UBE2R2Q712K3 238 aaPredicted RBP13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 LRRC56Q8IYG6 542 aaPredicted RBP13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 CPNE9Q8IYJ1 553 aa13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 DTWD1Q8N5C7 304 aa13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 C2CD4AQ8NCU7 369 aaPredicted RBP13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 PPFIBP2Q8ND30 876 aa13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 OR11G2Q8NGC1 345 aa13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 MCOLN3Q8TDD5 553 aa13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 SLCO2A1Q92959 643 aa13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 C10orf90Q96M02 699 aa13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 AGAP4Q96P64 663 aa13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 PSMG3-AS1Q96PY0 264 aa13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 LHPPQ9H008 270 aa13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 ILKAPQ9H0C8 392 aaPredicted RBP13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 GRPEL1Q9HAV7 217 aa13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 TRMT6Q9UJA5 497 aaKnown RBP13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 TCP11X1B4DZS4 312 aa13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 AGFG2O95081 481 aa13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 GP1BBP13224 206 aa13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 TCP1P17987 556 aaKnown RBP13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 IMPA1P29218 277 aa13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 RGS4P49798 205 aa13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 DSG2Q14126 1118 aa13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 HKDC1Q2TB90 917 aa13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 SPANXN3Q5MJ09 141 aa13.22□□□□□ -0.29
TMEM41B-201ENST00000299596 IGFL2Q6UWQ7 119 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms