RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 SPARTQ8N0X7 666 aa13.08□□□□□ -0.32
CTDP1-202ENST00000299543 HIST1H2AHQ96KK5 128 aa13.08□□□□□ -0.32
CTDP1-202ENST00000299543 HIST1H2AJQ99878 128 aa13.08□□□□□ -0.32
CTDP1-202ENST00000299543 H2AFJQ9BTM1 129 aa13.08□□□□□ -0.32
CTDP1-202ENST00000299543 RASSF1Q9NS23 344 aa13.08□□□□□ -0.32
CTDP1-202ENST00000299543 GPRC5BQ9NZH0 403 aa13.08□□□□□ -0.32
CTDP1-202ENST00000299543 ZNF701M0R085 212 aaPredicted RBP13.07□□□□□ -0.32
CTDP1-202ENST00000299543 IFRD1O00458 451 aaPredicted RBP13.07□□□□□ -0.32
CTDP1-202ENST00000299543 RFXANKO14593 260 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 ABCB7O75027 752 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 IL6P05231 212 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 CYP4F8P98187 520 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 MAD2L1Q13257 205 aaPredicted RBP13.07□□□□□ -0.32
CTDP1-202ENST00000299543 TTLL9Q3SXZ7 439 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 C5orf22Q49AR2 442 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 XAF1Q6GPH4 301 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 CHST9Q7L1S5 443 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 CADM2Q8N3J6 435 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 CELF2-AS1Q8N7Q2 184 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 GPR26Q8NDV2 337 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 BARD1Q99728 777 aaKnown RBP13.07□□□□□ -0.32
CTDP1-202ENST00000299543 C2orf49Q9BVC5 232 aaPredicted RBP13.07□□□□□ -0.32
CTDP1-202ENST00000299543 TTLL2Q9BWV7 592 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 ACPTQ9BZG2 426 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 SLC22A14Q9Y267 594 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 YIPF1Q9Y548 306 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 PMF1-BGLAPU3KQ54 211 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 ANKRD36A6QL64 1941 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 AP3D1O14617 1153 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 TSPAN9O75954 239 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 TRBC1P01850 177 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 NTRK1P04629 796 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 ACRV1P26436 265 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 DCTP40126 519 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 POM121L1PQ3SYA9 428 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 GRAMD2AQ8IUY3 354 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 PDPRQ8NCN5 879 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 CHDHQ8NE62 594 aaPredicted RBP13.07□□□□□ -0.32
CTDP1-202ENST00000299543 TPD52L3Q96J77 140 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 RBM4BQ9BQ04 359 aaKnown RBP13.07□□□□□ -0.32
CTDP1-202ENST00000299543 RBM4Q9BWF3 364 aaKnown RBP13.07□□□□□ -0.32
CTDP1-202ENST00000299543 KLF16Q9BXK1 252 aaPredicted RBP13.07□□□□□ -0.32
CTDP1-202ENST00000299543 REXO4Q9GZR2 422 aaKnown RBP13.07□□□□□ -0.32
CTDP1-202ENST00000299543 SMG9Q9H0W8 520 aaKnown RBP13.07□□□□□ -0.32
CTDP1-202ENST00000299543 AKIP1Q9NQ31 210 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 C3orf18Q9UK00 162 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 NPIPB15A6NHN6 443 aaPredicted RBP13.07□□□□□ -0.32
CTDP1-202ENST00000299543 H7C0S8 307 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 GTF2E2P29084 291 aaKnown RBP13.07□□□□□ -0.32
CTDP1-202ENST00000299543 DAB2P98082 770 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 ZXDBP98169 803 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 SMARCB1Q12824 385 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 CYP2U1Q7Z449 544 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 ZDHHC21Q8IVQ6 265 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 FAM83FQ8NEG4 500 aaPredicted RBP13.07□□□□□ -0.32
CTDP1-202ENST00000299543 PRRG3Q9BZD7 231 aa13.07□□□□□ -0.32
CTDP1-202ENST00000299543 GAPDHSO14556 408 aaPredicted RBP13.06□□□□□ -0.32
CTDP1-202ENST00000299543 GLULP15104 373 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 CTSOP43234 321 aaPredicted RBP13.06□□□□□ -0.32
CTDP1-202ENST00000299543 VBP1P61758 197 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 SP3Q02447 781 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 ATP13A5Q4VNC0 1218 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 TMEM132CQ8N3T6 1108 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 PMEPA1Q969W9 287 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 APIPQ96GX9 242 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 MAP6Q96JE9 813 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 NODALQ96S42 347 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 MTERF1Q99551 399 aaKnown RBP13.06□□□□□ -0.32
CTDP1-202ENST00000299543 COPS8Q99627 209 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 DPH2Q9BQC3 489 aaPredicted RBP13.06□□□□□ -0.32
CTDP1-202ENST00000299543 B3GNT4Q9C0J1 378 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 ZDHHC6Q9H6R6 413 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 UCKL1Q9NWZ5 548 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 MBD1Q9UIS9 605 aaPredicted RBP13.06□□□□□ -0.32
CTDP1-202ENST00000299543 B3GNT3Q9Y2A9 372 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 CCL27Q9Y4X3 112 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 PATJQ8NI35 1801 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 EVPLLA8MZ36 301 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 BCKDKO14874 412 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 AREL1O15033 823 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 NUAK1O60285 661 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 ALOX12P18054 663 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 PSMB9P28065 219 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 SPAM1P38567 509 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 PTCHD3Q3KNS1 767 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 INO80DQ53TQ3 878 aaPredicted RBP13.06□□□□□ -0.32
CTDP1-202ENST00000299543 RUNDC3AQ59EK9 446 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 VTCN1Q7Z7D3 282 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 ZSWIM9Q86XI8 627 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 SDR16C5Q8N3Y7 309 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 SPERTQ8NA61 448 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 HJURPQ8NCD3 748 aaPredicted RBP13.06□□□□□ -0.32
CTDP1-202ENST00000299543 ZNF461Q8TAF7 563 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 PANX1Q96RD7 426 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 MBOAT4Q96T53 435 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 C6orf62Q9GZU0 229 aaPredicted RBP13.06□□□□□ -0.32
CTDP1-202ENST00000299543 ZNF639Q9UID6 485 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 SCELO95171 688 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 UGT2B4P06133 528 aa13.06□□□□□ -0.32
CTDP1-202ENST00000299543 MAP2K4P45985 399 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms