RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 CAPRIN2Q6IMN6 1127 aaKnown RBP20.36■□□□□ 0.85
SMCO4-201ENST00000298966 CPNE9Q8IYJ1 553 aa20.36■□□□□ 0.85
SMCO4-201ENST00000298966 RASGEF1AQ8N9B8 481 aa20.36■□□□□ 0.85
SMCO4-201ENST00000298966 GALNT11Q8NCW6 608 aa20.36■□□□□ 0.85
SMCO4-201ENST00000298966 GIMAP7Q8NHV1 300 aa20.36■□□□□ 0.85
SMCO4-201ENST00000298966 SLC37A2Q8TED4 501 aa20.36■□□□□ 0.85
SMCO4-201ENST00000298966 CCM2Q9BSQ5 444 aa20.36■□□□□ 0.85
SMCO4-201ENST00000298966 POLHQ9Y253 713 aa20.36■□□□□ 0.85
SMCO4-201ENST00000298966 MRPS18BQ9Y676 258 aaKnown RBP20.36■□□□□ 0.85
SMCO4-201ENST00000298966 IQCF5A8MTL0 148 aa20.35■□□□□ 0.85
SMCO4-201ENST00000298966 TMEM114B3SHH9 223 aa20.35■□□□□ 0.85
SMCO4-201ENST00000298966 INPP4BO15327 924 aa20.35■□□□□ 0.85
SMCO4-201ENST00000298966 DNAJC6O75061 913 aa20.35■□□□□ 0.85
SMCO4-201ENST00000298966 GNLYP22749 145 aa20.35■□□□□ 0.85
SMCO4-201ENST00000298966 CHI3L2Q15782 390 aa20.35■□□□□ 0.85
SMCO4-201ENST00000298966 ADGRG6Q86SQ4 1221 aa20.35■□□□□ 0.85
SMCO4-201ENST00000298966 KIRREL3Q8IZU9 778 aa20.35■□□□□ 0.85
SMCO4-201ENST00000298966 NCSTNQ92542 709 aa20.35■□□□□ 0.85
SMCO4-201ENST00000298966 C7orf26Q96N11 449 aa20.35■□□□□ 0.85
SMCO4-201ENST00000298966 MECRQ9BV79 373 aa20.35■□□□□ 0.85
SMCO4-201ENST00000298966 STN1Q9H668 368 aaKnown RBP20.35■□□□□ 0.85
SMCO4-201ENST00000298966 TTLL8A6PVC2 850 aa20.34■□□□□ 0.85
SMCO4-201ENST00000298966 LIN7AO14910 233 aaPredicted RBP20.34■□□□□ 0.85
SMCO4-201ENST00000298966 SGTAO43765 313 aa20.34■□□□□ 0.85
SMCO4-201ENST00000298966 ZBTB14O43829 449 aa20.34■□□□□ 0.85
SMCO4-201ENST00000298966 SNX3O60493 162 aa20.34■□□□□ 0.85
SMCO4-201ENST00000298966 KCNJ13O60928 360 aa20.34■□□□□ 0.85
SMCO4-201ENST00000298966 ENO2P09104 434 aaPredicted RBP20.34■□□□□ 0.85
SMCO4-201ENST00000298966 SBK3P0C264 359 aa20.34■□□□□ 0.85
SMCO4-201ENST00000298966 STX3Q13277 289 aa20.34■□□□□ 0.85
SMCO4-201ENST00000298966 SP140Q13342 867 aa20.34■□□□□ 0.85
SMCO4-201ENST00000298966 CDKL4Q5MAI5 379 aa20.34■□□□□ 0.85
SMCO4-201ENST00000298966 FAM47EQ6ZV65 393 aa20.34■□□□□ 0.85
SMCO4-201ENST00000298966 C10orf107Q8IVU9 208 aa20.34■□□□□ 0.85
SMCO4-201ENST00000298966 SFRP1Q8N474 314 aa20.34■□□□□ 0.85
SMCO4-201ENST00000298966 OR6Y1Q8NGX8 325 aa20.34■□□□□ 0.85
SMCO4-201ENST00000298966 LKAAEAR1Q8TD35 194 aa20.34■□□□□ 0.85
SMCO4-201ENST00000298966 EEF1AKMT1Q8WVE0 214 aa20.34■□□□□ 0.85
SMCO4-201ENST00000298966 SCARF2Q96GP6 870 aaPredicted RBP20.34■□□□□ 0.85
SMCO4-201ENST00000298966 ATOH8Q96SQ7 321 aa20.34■□□□□ 0.85
SMCO4-201ENST00000298966 SLC30A3Q99726 388 aa20.34■□□□□ 0.85
SMCO4-201ENST00000298966 ALG9Q9H6U8 611 aa20.34■□□□□ 0.85
SMCO4-201ENST00000298966 THAP1Q9NVV9 213 aa20.34■□□□□ 0.85
SMCO4-201ENST00000298966 CPSF2Q9P2I0 782 aaKnown RBP20.34■□□□□ 0.85
SMCO4-201ENST00000298966 GALPQ9UBC7 116 aa20.34■□□□□ 0.85
SMCO4-201ENST00000298966 RNF112Q9ULX5 631 aa20.34■□□□□ 0.85
SMCO4-201ENST00000298966 BTN3A1O00481 513 aa20.33■□□□□ 0.85
SMCO4-201ENST00000298966 CHUKO15111 745 aa20.33■□□□□ 0.85
SMCO4-201ENST00000298966 SLC16A5O15375 505 aa20.33■□□□□ 0.85
SMCO4-201ENST00000298966 SNNO75324 88 aaPredicted RBP20.33■□□□□ 0.85
SMCO4-201ENST00000298966 IPO13O94829 963 aaKnown RBP20.33■□□□□ 0.85
SMCO4-201ENST00000298966 C8GP07360 202 aa20.33■□□□□ 0.85
SMCO4-201ENST00000298966 F8A1P23610 371 aa20.33■□□□□ 0.85
SMCO4-201ENST00000298966 CCR7P32248 378 aa20.33■□□□□ 0.85
SMCO4-201ENST00000298966 DLSTP36957 453 aa20.33■□□□□ 0.85
SMCO4-201ENST00000298966 PGGT1BP53609 377 aa20.33■□□□□ 0.85
SMCO4-201ENST00000298966 HHEXQ03014 270 aa20.33■□□□□ 0.85
SMCO4-201ENST00000298966 BST1Q10588 318 aa20.33■□□□□ 0.85
SMCO4-201ENST00000298966 KHDC1Q4VXA5 237 aaKnown RBP20.33■□□□□ 0.85
SMCO4-201ENST00000298966 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.33■□□□□ 0.85
SMCO4-201ENST00000298966 TMEM220Q6QAJ8 160 aa20.33■□□□□ 0.85
SMCO4-201ENST00000298966 ZNF771Q7L3S4 317 aaPredicted RBP20.33■□□□□ 0.85
SMCO4-201ENST00000298966 PIWIL4Q7Z3Z4 852 aaKnown RBP20.33■□□□□ 0.85
SMCO4-201ENST00000298966 ELMO1Q92556 727 aa20.33■□□□□ 0.85
SMCO4-201ENST00000298966 SH3KBP1Q96B97 665 aa20.33■□□□□ 0.85
SMCO4-201ENST00000298966 PTERQ96BW5 349 aa20.33■□□□□ 0.85
SMCO4-201ENST00000298966 FAM136AQ96C01 138 aa20.33■□□□□ 0.85
SMCO4-201ENST00000298966 SEC16BQ96JE7 1060 aa20.33■□□□□ 0.85
SMCO4-201ENST00000298966 SLCO1B3Q9NPD5 702 aa20.33■□□□□ 0.85
SMCO4-201ENST00000298966 NUDT4Q9NZJ9 180 aa20.33■□□□□ 0.85
SMCO4-201ENST00000298966 ATXN10Q9UBB4 475 aa20.33■□□□□ 0.85
SMCO4-201ENST00000298966 KLHL3Q9UH77 587 aa20.33■□□□□ 0.85
SMCO4-201ENST00000298966 MTX2O75431 263 aa20.32■□□□□ 0.84
SMCO4-201ENST00000298966 GPC4O75487 556 aa20.32■□□□□ 0.84
SMCO4-201ENST00000298966 SLCO2B1O94956 709 aa20.32■□□□□ 0.84
SMCO4-201ENST00000298966 TGDSO95455 350 aa20.32■□□□□ 0.84
SMCO4-201ENST00000298966 LRP8Q14114 963 aa20.32■□□□□ 0.84
SMCO4-201ENST00000298966 ERV3-1Q14264 604 aa20.32■□□□□ 0.84
SMCO4-201ENST00000298966 ZSCAN26Q16670 478 aa20.32■□□□□ 0.84
SMCO4-201ENST00000298966 SYTL3Q4VX76 610 aa20.32■□□□□ 0.84
SMCO4-201ENST00000298966 PYCR3Q53H96 274 aa20.32■□□□□ 0.84
SMCO4-201ENST00000298966 DET1Q7L5Y6 550 aa20.32■□□□□ 0.84
SMCO4-201ENST00000298966 SPATA21Q7Z572 469 aa20.32■□□□□ 0.84
SMCO4-201ENST00000298966 GALNT13Q8IUC8 556 aa20.32■□□□□ 0.84
SMCO4-201ENST00000298966 HOMEZQ8IX15 550 aa20.32■□□□□ 0.84
SMCO4-201ENST00000298966 SPATA6LQ8N4H0 392 aa20.32■□□□□ 0.84
SMCO4-201ENST00000298966 CCDC197Q8NCU1 140 aa20.32■□□□□ 0.84
SMCO4-201ENST00000298966 HM13Q8TCT9 377 aa20.32■□□□□ 0.84
SMCO4-201ENST00000298966 ELAC2Q9BQ52 826 aaKnown RBP20.32■□□□□ 0.84
SMCO4-201ENST00000298966 TRMOQ9BU70 441 aa20.32■□□□□ 0.84
SMCO4-201ENST00000298966 ULBP3Q9BZM4 244 aa20.32■□□□□ 0.84
SMCO4-201ENST00000298966 OR2AG1Q9H205 316 aa20.32■□□□□ 0.84
SMCO4-201ENST00000298966 TMEM98Q9Y2Y6 226 aa20.32■□□□□ 0.84
SMCO4-201ENST00000298966 OR2AG2A6NM03 316 aa20.31■□□□□ 0.84
SMCO4-201ENST00000298966 STX16-NPEPL1H3BU86 382 aa20.31■□□□□ 0.84
SMCO4-201ENST00000298966 STX16O14662 325 aa20.31■□□□□ 0.84
SMCO4-201ENST00000298966 KLK8O60259 260 aa20.31■□□□□ 0.84
SMCO4-201ENST00000298966 DLX3O60479 287 aa20.31■□□□□ 0.84
SMCO4-201ENST00000298966 NPHS1O60500 1241 aa20.31■□□□□ 0.84
SMCO4-201ENST00000298966 KATNA1O75449 491 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms