RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 FAM234BA2RU67 622 aa15.03■□□□□ -0
LSM6-201ENST00000296581 OXTRP30559 389 aa15.03■□□□□ -0
LSM6-201ENST00000296581 CSTF3Q12996 717 aaKnown RBP15.03■□□□□ -0
LSM6-201ENST00000296581 C8orf82Q6P1X6 216 aaPredicted RBP15.03■□□□□ -0
LSM6-201ENST00000296581 LCTLQ6UWM7 567 aa15.03■□□□□ -0
LSM6-201ENST00000296581 BNC2Q6ZN30 1099 aaPredicted RBP15.03■□□□□ -0
LSM6-201ENST00000296581 DEFB123Q8N688 67 aa15.03■□□□□ -0
LSM6-201ENST00000296581 SMYD1Q8NB12 490 aa15.03■□□□□ -0
LSM6-201ENST00000296581 TSTD1Q8NFU3 115 aa15.03■□□□□ -0
LSM6-201ENST00000296581 ROPN1LQ96C74 230 aa15.03■□□□□ -0
LSM6-201ENST00000296581 CMTM7Q96FZ5 175 aa15.03■□□□□ -0
LSM6-201ENST00000296581 TOE1Q96GM8 510 aaKnown RBP15.03■□□□□ -0
LSM6-201ENST00000296581 PLAGL1Q9UM63 463 aa15.03■□□□□ -0
LSM6-201ENST00000296581 TDRKHQ9Y2W6 561 aaKnown RBP15.03■□□□□ -0
LSM6-201ENST00000296581 TNFRSF10CO14798 259 aa15.02□□□□□ -0.01
LSM6-201ENST00000296581 ENTPD5O75356 428 aa15.02□□□□□ -0.01
LSM6-201ENST00000296581 SEC22BO75396 215 aa15.02□□□□□ -0.01
LSM6-201ENST00000296581 E2F6O75461 281 aa15.02□□□□□ -0.01
LSM6-201ENST00000296581 VARSP26640 1264 aaKnown RBP15.02□□□□□ -0.01
LSM6-201ENST00000296581 HTR1BP28222 390 aa15.02□□□□□ -0.01
LSM6-201ENST00000296581 IL12AP29459 219 aa15.02□□□□□ -0.01
LSM6-201ENST00000296581 DPP6P42658 865 aa15.02□□□□□ -0.01
LSM6-201ENST00000296581 CTBSQ01459 385 aa15.02□□□□□ -0.01
LSM6-201ENST00000296581 CBX3Q13185 183 aa15.02□□□□□ -0.01
LSM6-201ENST00000296581 UAP1L1Q3KQV9 507 aa15.02□□□□□ -0.01
LSM6-201ENST00000296581 VPS26BQ4G0F5 336 aa15.02□□□□□ -0.01
LSM6-201ENST00000296581 ATG9BQ674R7 924 aa15.02□□□□□ -0.01
LSM6-201ENST00000296581 DUS1LQ6P1R4 473 aaKnown RBP15.02□□□□□ -0.01
LSM6-201ENST00000296581 ENPP7Q6UWV6 458 aa15.02□□□□□ -0.01
LSM6-201ENST00000296581 LMNTD1Q8N9Z9 388 aa15.02□□□□□ -0.01
LSM6-201ENST00000296581 PCYOX1LQ8NBM8 494 aa15.02□□□□□ -0.01
LSM6-201ENST00000296581 PDXPQ96GD0 296 aa15.02□□□□□ -0.01
LSM6-201ENST00000296581 SHDQ96IW2 340 aa15.02□□□□□ -0.01
LSM6-201ENST00000296581 SLC45A3Q96JT2 553 aa15.02□□□□□ -0.01
LSM6-201ENST00000296581 C12orf66Q96MD2 445 aa15.02□□□□□ -0.01
LSM6-201ENST00000296581 WSB2Q9NYS7 404 aaPredicted RBP15.02□□□□□ -0.01
LSM6-201ENST00000296581 SH2B3Q9UQQ2 575 aa15.02□□□□□ -0.01
LSM6-201ENST00000296581 PCDHGA7Q9Y5G6 932 aa15.02□□□□□ -0.01
LSM6-201ENST00000296581 PCDHGA11Q9Y5H2 935 aa15.02□□□□□ -0.01
LSM6-201ENST00000296581 LRP4O75096 1905 aa15.02□□□□□ -0.01
LSM6-201ENST00000296581 PCM1Q15154 2024 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 A0A1W2PP18 115 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 C9JVG2 144 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 PDE5AO76074 875 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 HSD3B1P14060 373 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 ACPPP15309 386 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 JAK1P23458 1154 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 HSD3B2P26439 372 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 POLR2JP52435 117 aaKnown RBP15.01□□□□□ -0.01
LSM6-201ENST00000296581 KCNK10P57789 538 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 ACTR3P61158 418 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 PSME3P61289 254 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 ZP2Q05996 745 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 PRKG2Q13237 762 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 LSAMPQ13449 338 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 UBXN2BQ14CS0 331 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 PRAMEF14Q5SWL7 426 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 C6orf163Q5TEZ5 329 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 PRAMEF13Q5VWM6 474 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 SUSD1Q6UWL2 747 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 ABI3BPQ7Z7G0 1075 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 TMPRSS11BQ86T26 416 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 SLC5A11Q8WWX8 675 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 CDRT15Q96T59 188 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 SERPINI1Q99574 410 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 EFCAB11Q9BUY7 163 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 SPATA6Q9NWH7 488 aaPredicted RBP15.01□□□□□ -0.01
LSM6-201ENST00000296581 MAP10Q9P2G4 905 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 PDP2Q9P2J9 529 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 DYTNA2CJ06 578 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 ZNF839A8K0R7 811 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 PRAMEF26H0Y7S4 382 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 ANGPT2O15123 496 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 NVLO15381 856 aaKnown RBP15.01□□□□□ -0.01
LSM6-201ENST00000296581 C1GALT1C1LP0DN25 315 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 CLCA4Q14CN2 919 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 USP39Q53GS9 565 aaKnown RBP15.01□□□□□ -0.01
LSM6-201ENST00000296581 PIGGQ5H8A4 983 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 CATSPEREQ5SY80 951 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 PRPF38BQ5VTL8 546 aaKnown RBP15.01□□□□□ -0.01
LSM6-201ENST00000296581 CACHD1Q5VU97 1274 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 RIPOR1Q6ZS17 1223 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 HPS6Q86YV9 775 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 ZBTB8BQ8NAP8 495 aaPredicted RBP15.01□□□□□ -0.01
LSM6-201ENST00000296581 HHIPQ96QV1 700 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 NELL2Q99435 816 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 HAUS8Q9BT25 410 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 BRF2Q9HAW0 419 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 NMRK1Q9NWW6 199 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 DMTF1Q9Y222 760 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 TMED5Q9Y3A6 229 aa15.01□□□□□ -0.01
LSM6-201ENST00000296581 ASPDHA6ND91 283 aa15□□□□□ -0.01
LSM6-201ENST00000296581 FAM170BA6NMN3 283 aa15□□□□□ -0.01
LSM6-201ENST00000296581 CFLARO15519 480 aa15□□□□□ -0.01
LSM6-201ENST00000296581 HNRNPRO43390 633 aaKnown RBP15□□□□□ -0.01
LSM6-201ENST00000296581 EEDO75530 441 aaKnown RBP15□□□□□ -0.01
LSM6-201ENST00000296581 PCSK2P16519 638 aa15□□□□□ -0.01
LSM6-201ENST00000296581 CD6P30203 668 aa15□□□□□ -0.01
LSM6-201ENST00000296581 TSTA3Q13630 321 aaPredicted RBP15□□□□□ -0.01
LSM6-201ENST00000296581 C10orf62Q5T681 223 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms