RNA–Protein interactions for RNA: ENST00000296255.7

RPN1-201, Transcript of ribophorin I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPN1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-201ENST00000296255 PTPN5P54829 565 aa16.15■□□□□ 0.18
RPN1-201ENST00000296255 LSM3P62310 102 aaKnown RBP16.15■□□□□ 0.18
RPN1-201ENST00000296255 ZNF846Q147U1 533 aa16.15■□□□□ 0.18
RPN1-201ENST00000296255 MSANTD1Q6ZTZ1 278 aa16.15■□□□□ 0.18
RPN1-201ENST00000296255 GPR155Q7Z3F1 870 aa16.15■□□□□ 0.18
RPN1-201ENST00000296255 TRIM74Q86UV6 250 aa16.15■□□□□ 0.18
RPN1-201ENST00000296255 TRIM73Q86UV7 250 aa16.15■□□□□ 0.18
RPN1-201ENST00000296255 CCDC71Q8IV32 467 aaPredicted RBP16.15■□□□□ 0.18
RPN1-201ENST00000296255 ELMOD1Q8N336 334 aa16.15■□□□□ 0.18
RPN1-201ENST00000296255 TCAIMQ8N3R3 496 aa16.15■□□□□ 0.18
RPN1-201ENST00000296255 ZFP90Q8TF47 636 aa16.15■□□□□ 0.18
RPN1-201ENST00000296255 UBE2FQ969M7 185 aa16.15■□□□□ 0.18
RPN1-201ENST00000296255 SCLYQ96I15 445 aa16.15■□□□□ 0.18
RPN1-201ENST00000296255 FCRL1Q96LA6 429 aa16.15■□□□□ 0.18
RPN1-201ENST00000296255 PANX1Q96RD7 426 aa16.15■□□□□ 0.18
RPN1-201ENST00000296255 IL21Q9HBE4 155 aa16.15■□□□□ 0.18
RPN1-201ENST00000296255 PDP1Q9P0J1 537 aaPredicted RBP16.15■□□□□ 0.18
RPN1-201ENST00000296255 GMPPBQ9Y5P6 360 aa16.15■□□□□ 0.18
RPN1-201ENST00000296255 PMF1-BGLAPU3KQ54 211 aa16.15■□□□□ 0.18
RPN1-201ENST00000296255 BNIP3LO60238 219 aa16.14■□□□□ 0.18
RPN1-201ENST00000296255 DNAJA1P31689 397 aaKnown RBP16.14■□□□□ 0.18
RPN1-201ENST00000296255 KDELR2P33947 212 aa16.14■□□□□ 0.18
RPN1-201ENST00000296255 PLEKHG6Q3KR16 790 aa16.14■□□□□ 0.18
RPN1-201ENST00000296255 LRRC73Q5JTD7 316 aa16.14■□□□□ 0.18
RPN1-201ENST00000296255 SERPINA13PQ6UXR4 307 aa16.14■□□□□ 0.18
RPN1-201ENST00000296255 BBS7Q8IWZ6 715 aa16.14■□□□□ 0.18
RPN1-201ENST00000296255 CLECL1Q8IZS7 167 aa16.14■□□□□ 0.18
RPN1-201ENST00000296255 ALPK1Q96QP1 1244 aa16.14■□□□□ 0.18
RPN1-201ENST00000296255 ATG10Q9H0Y0 220 aa16.14■□□□□ 0.18
RPN1-201ENST00000296255 SIRT5Q9NXA8 310 aa16.14■□□□□ 0.18
RPN1-201ENST00000296255 NDRG4Q9ULP0 352 aaKnown RBP16.14■□□□□ 0.18
RPN1-201ENST00000296255 ERVW-1Q9UQF0 538 aa16.14■□□□□ 0.18
RPN1-201ENST00000296255 TPRKBQ9Y3C4 175 aa16.14■□□□□ 0.18
RPN1-201ENST00000296255 EIF3FO00303 357 aaPredicted RBP16.14■□□□□ 0.17
RPN1-201ENST00000296255 SERPINB7O75635 380 aa16.14■□□□□ 0.17
RPN1-201ENST00000296255 MT-ND2P03891 347 aa16.14■□□□□ 0.17
RPN1-201ENST00000296255 FABP3P05413 133 aa16.14■□□□□ 0.17
RPN1-201ENST00000296255 HIST1H2AGP0C0S8 130 aaPredicted RBP16.14■□□□□ 0.17
RPN1-201ENST00000296255 OR56A5P0C7T3 313 aa16.14■□□□□ 0.17
RPN1-201ENST00000296255 GPX2P18283 190 aa16.14■□□□□ 0.17
RPN1-201ENST00000296255 CD22P20273 847 aa16.14■□□□□ 0.17
RPN1-201ENST00000296255 HIST1H2ADP20671 130 aa16.14■□□□□ 0.17
RPN1-201ENST00000296255 PRPS1L1P21108 318 aa16.14■□□□□ 0.17
RPN1-201ENST00000296255 FPR1P21462 350 aa16.14■□□□□ 0.17
RPN1-201ENST00000296255 HALP42357 657 aa16.14■□□□□ 0.17
RPN1-201ENST00000296255 HNMTP50135 292 aa16.14■□□□□ 0.17
RPN1-201ENST00000296255 OCA2Q04671 838 aa16.14■□□□□ 0.17
RPN1-201ENST00000296255 CHIT1Q13231 466 aa16.14■□□□□ 0.17
RPN1-201ENST00000296255 SF1Q15637 639 aaKnown RBP16.14■□□□□ 0.17
RPN1-201ENST00000296255 SYT6Q5T7P8 510 aaPredicted RBP16.14■□□□□ 0.17
RPN1-201ENST00000296255 ZNF621Q6ZSS3 439 aa16.14■□□□□ 0.17
RPN1-201ENST00000296255 HOMEZQ8IX15 550 aa16.14■□□□□ 0.17
RPN1-201ENST00000296255 TTC29Q8NA56 475 aaPredicted RBP16.14■□□□□ 0.17
RPN1-201ENST00000296255 ZBTB8BQ8NAP8 495 aaPredicted RBP16.14■□□□□ 0.17
RPN1-201ENST00000296255 ECHDC3Q96DC8 303 aa16.14■□□□□ 0.17
RPN1-201ENST00000296255 VMP1Q96GC9 406 aa16.14■□□□□ 0.17
RPN1-201ENST00000296255 HSH2DQ96JZ2 352 aa16.14■□□□□ 0.17
RPN1-201ENST00000296255 HIST1H2AHQ96KK5 128 aa16.14■□□□□ 0.17
RPN1-201ENST00000296255 HIST1H2AJQ99878 128 aa16.14■□□□□ 0.17
RPN1-201ENST00000296255 H2AFJQ9BTM1 129 aa16.14■□□□□ 0.17
RPN1-201ENST00000296255 DNAJC11Q9NVH1 559 aa16.14■□□□□ 0.17
RPN1-201ENST00000296255 SRRDQ9UH36 339 aa16.14■□□□□ 0.17
RPN1-201ENST00000296255 HSPE1-MOB4S4R3N1 261 aa16.14■□□□□ 0.17
RPN1-201ENST00000296255 GFYI3L273 518 aa16.13■□□□□ 0.17
RPN1-201ENST00000296255 JRKO75564 520 aa16.13■□□□□ 0.17
RPN1-201ENST00000296255 PARNO95453 639 aaKnown RBP16.13■□□□□ 0.17
RPN1-201ENST00000296255 C1SP09871 688 aa16.13■□□□□ 0.17
RPN1-201ENST00000296255 SRCP12931 536 aa16.13■□□□□ 0.17
RPN1-201ENST00000296255 ACPPP15309 386 aa16.13■□□□□ 0.17
RPN1-201ENST00000296255 EFNA1P20827 205 aaPredicted RBP16.13■□□□□ 0.17
RPN1-201ENST00000296255 PFN3P60673 137 aa16.13■□□□□ 0.17
RPN1-201ENST00000296255 CXCR4P61073 352 aa16.13■□□□□ 0.17
RPN1-201ENST00000296255 VBP1P61758 197 aa16.13■□□□□ 0.17
RPN1-201ENST00000296255 CBX3Q13185 183 aa16.13■□□□□ 0.17
RPN1-201ENST00000296255 CLCA4Q14CN2 919 aa16.13■□□□□ 0.17
RPN1-201ENST00000296255 MAD2L1BPQ15013 274 aaPredicted RBP16.13■□□□□ 0.17
RPN1-201ENST00000296255 CCDC81Q6ZN84 652 aa16.13■□□□□ 0.17
RPN1-201ENST00000296255 SYT12Q8IV01 421 aa16.13■□□□□ 0.17
RPN1-201ENST00000296255 ZNF300Q96RE9 604 aaPredicted RBP16.13■□□□□ 0.17
RPN1-201ENST00000296255 BBS2Q9BXC9 721 aa16.13■□□□□ 0.17
RPN1-201ENST00000296255 CD84Q9UIB8 345 aa16.13■□□□□ 0.17
RPN1-201ENST00000296255 SERTM1A2A2V5 107 aa16.13■□□□□ 0.17
RPN1-201ENST00000296255 SLC22A1O15245 554 aa16.13■□□□□ 0.17
RPN1-201ENST00000296255 CPSF4O95639 269 aaKnown RBP16.13■□□□□ 0.17
RPN1-201ENST00000296255 ARHGDIAP52565 204 aa16.13■□□□□ 0.17
RPN1-201ENST00000296255 IFITM3Q01628 133 aa16.13■□□□□ 0.17
RPN1-201ENST00000296255 SP3Q02447 781 aa16.13■□□□□ 0.17
RPN1-201ENST00000296255 DGCR6Q14129 220 aa16.13■□□□□ 0.17
RPN1-201ENST00000296255 IQCCQ4KMZ1 466 aa16.13■□□□□ 0.17
RPN1-201ENST00000296255 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.13■□□□□ 0.172e-13■■■■■ 43.6
RPN1-201ENST00000296255 SNX29P2Q8IUI4 249 aa16.13■□□□□ 0.17
RPN1-201ENST00000296255 KLHL23Q8NBE8 558 aa16.13■□□□□ 0.17
RPN1-201ENST00000296255 CSGALNACT1Q8TDX6 532 aa16.13■□□□□ 0.17
RPN1-201ENST00000296255 AUTS2Q8WXX7 1259 aa16.13■□□□□ 0.17
RPN1-201ENST00000296255 MCCC1Q96RQ3 725 aaPredicted RBP16.13■□□□□ 0.17
RPN1-201ENST00000296255 BCL7BQ9BQE9 202 aa16.13■□□□□ 0.17
RPN1-201ENST00000296255 BTBD2Q9BX70 525 aa16.13■□□□□ 0.17
RPN1-201ENST00000296255 SUV39H2Q9H5I1 410 aa16.13■□□□□ 0.17
RPN1-201ENST00000296255 HMG20AQ9NP66 347 aa16.13■□□□□ 0.17
RPN1-201ENST00000296255 TRNAU1APQ9NX07 287 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms