RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 TSTA3Q13630 321 aaPredicted RBP18.69■□□□□ 0.58
CXCL3-201ENST00000296026 TLR1Q15399 786 aa18.69■□□□□ 0.58
CXCL3-201ENST00000296026 TRIP13Q15645 432 aaPredicted RBP18.69■□□□□ 0.58
CXCL3-201ENST00000296026 PRTGQ2VWP7 1150 aa18.69■□□□□ 0.58
CXCL3-201ENST00000296026 ATG9BQ674R7 924 aa18.69■□□□□ 0.58
CXCL3-201ENST00000296026 B3GNTL1Q67FW5 361 aaPredicted RBP18.69■□□□□ 0.58
CXCL3-201ENST00000296026 ZNF787Q6DD87 383 aa18.69■□□□□ 0.58
CXCL3-201ENST00000296026 CENPUQ71F23 418 aa18.69■□□□□ 0.58
CXCL3-201ENST00000296026 LAPTM4BQ86VI4 370 aa18.69■□□□□ 0.58
CXCL3-201ENST00000296026 GRHL3Q8TE85 626 aa18.69■□□□□ 0.58
CXCL3-201ENST00000296026 PLCD4Q9BRC7 762 aa18.69■□□□□ 0.58
CXCL3-201ENST00000296026 MDC1Q14676 2089 aaKnown RBP18.69■□□□□ 0.58
CXCL3-201ENST00000296026 UNC79Q9P2D8 2635 aa18.69■□□□□ 0.58
CXCL3-201ENST00000296026 IGLV3-12A0A075B6K2 115 aa18.68■□□□□ 0.58
CXCL3-201ENST00000296026 MYO1CO00159 1063 aa18.68■□□□□ 0.58
CXCL3-201ENST00000296026 CEP104O60308 925 aa18.68■□□□□ 0.58
CXCL3-201ENST00000296026 PHF2O75151 1096 aa18.68■□□□□ 0.58
CXCL3-201ENST00000296026 VPS26AO75436 327 aa18.68■□□□□ 0.58
CXCL3-201ENST00000296026 PAMP19021 973 aa18.68■□□□□ 0.58
CXCL3-201ENST00000296026 EMP3P54852 163 aa18.68■□□□□ 0.58
CXCL3-201ENST00000296026 ARHGAP19Q14CB8 494 aa18.68■□□□□ 0.58
CXCL3-201ENST00000296026 CILP2Q8IUL8 1156 aa18.68■□□□□ 0.58
CXCL3-201ENST00000296026 LMF1Q96S06 567 aa18.68■□□□□ 0.58
CXCL3-201ENST00000296026 YIPF2Q9BWQ6 316 aa18.68■□□□□ 0.58
CXCL3-201ENST00000296026 SYNPO2LQ9H987 977 aa18.68■□□□□ 0.58
CXCL3-201ENST00000296026 FAM114A2Q9NRY5 505 aa18.68■□□□□ 0.58
CXCL3-201ENST00000296026 TAC3Q9UHF0 121 aa18.68■□□□□ 0.58
CXCL3-201ENST00000296026 CDC14AQ9UNH5 594 aa18.68■□□□□ 0.58
CXCL3-201ENST00000296026 NSG1A0A0A6YYJ2 146 aa18.67■□□□□ 0.58
CXCL3-201ENST00000296026 IGKV1-8A0A0C4DH67 115 aa18.67■□□□□ 0.58
CXCL3-201ENST00000296026 E2F3O00716 465 aa18.67■□□□□ 0.58
CXCL3-201ENST00000296026 CATP04040 527 aaKnown RBP18.67■□□□□ 0.58
CXCL3-201ENST00000296026 DCTP40126 519 aa18.67■□□□□ 0.58
CXCL3-201ENST00000296026 VPS41P49754 854 aa18.67■□□□□ 0.58
CXCL3-201ENST00000296026 PNLIPRP1P54315 467 aa18.67■□□□□ 0.58
CXCL3-201ENST00000296026 SARNPP82979 210 aaKnown RBP18.67■□□□□ 0.58
CXCL3-201ENST00000296026 KCNJ11Q14654 390 aa18.67■□□□□ 0.58
CXCL3-201ENST00000296026 HKDC1Q2TB90 917 aa18.67■□□□□ 0.58
CXCL3-201ENST00000296026 NEPROQ6NW34 567 aa18.67■□□□□ 0.58
CXCL3-201ENST00000296026 CASC4Q6P4E1 433 aa18.67■□□□□ 0.58
CXCL3-201ENST00000296026 PAQR7Q86WK9 346 aa18.67■□□□□ 0.58
CXCL3-201ENST00000296026 KBTBD2Q8IY47 623 aa18.67■□□□□ 0.58
CXCL3-201ENST00000296026 CSNK1A1LQ8N752 337 aa18.67■□□□□ 0.58
CXCL3-201ENST00000296026 CATSPER1Q8NEC5 780 aa18.67■□□□□ 0.58
CXCL3-201ENST00000296026 FAR1Q8WVX9 515 aa18.67■□□□□ 0.58
CXCL3-201ENST00000296026 PKP4Q99569 1192 aa18.67■□□□□ 0.58
CXCL3-201ENST00000296026 TRIM56Q9BRZ2 755 aaKnown RBP18.67■□□□□ 0.58
CXCL3-201ENST00000296026 HOMER3Q9NSC5 361 aa18.67■□□□□ 0.58
CXCL3-201ENST00000296026 TRPC4Q9UBN4 977 aa18.67■□□□□ 0.58
CXCL3-201ENST00000296026 RUVBL1Q9Y265 456 aaKnown RBP18.67■□□□□ 0.58
CXCL3-201ENST00000296026 VPS9D1Q9Y2B5 631 aa18.67■□□□□ 0.58
CXCL3-201ENST00000296026 IDSB3KWA1 339 aa18.66■□□□□ 0.58
CXCL3-201ENST00000296026 FFAR3O14843 346 aa18.66■□□□□ 0.58
CXCL3-201ENST00000296026 GPR42O15529 346 aa18.66■□□□□ 0.58
CXCL3-201ENST00000296026 PRPF4O43172 522 aaKnown RBP eCLIP18.66■□□□□ 0.58
CXCL3-201ENST00000296026 USP1O94782 785 aa18.66■□□□□ 0.58
CXCL3-201ENST00000296026 CCDC175P0C221 793 aa18.66■□□□□ 0.58
CXCL3-201ENST00000296026 COX6A1P12074 109 aa18.66■□□□□ 0.58
CXCL3-201ENST00000296026 EDN3P14138 238 aa18.66■□□□□ 0.58
CXCL3-201ENST00000296026 CXCR2P25025 360 aa18.66■□□□□ 0.58
CXCL3-201ENST00000296026 CXCR5P32302 372 aa18.66■□□□□ 0.58
CXCL3-201ENST00000296026 HSD17B2P37059 387 aa18.66■□□□□ 0.58
CXCL3-201ENST00000296026 CLCN7P51798 805 aa18.66■□□□□ 0.58
CXCL3-201ENST00000296026 EMP2P54851 167 aa18.66■□□□□ 0.58
CXCL3-201ENST00000296026 PRDX1Q06830 199 aaKnown RBP18.66■□□□□ 0.58
CXCL3-201ENST00000296026 GPS1Q13098 491 aa18.66■□□□□ 0.58
CXCL3-201ENST00000296026 DSG2Q14126 1118 aa18.66■□□□□ 0.58
CXCL3-201ENST00000296026 ICE2Q659A1 982 aa18.66■□□□□ 0.58
CXCL3-201ENST00000296026 NDUFAF7Q7L592 441 aa18.66■□□□□ 0.58
CXCL3-201ENST00000296026 REXO1L1PQ8IX06 675 aa18.66■□□□□ 0.58
CXCL3-201ENST00000296026 PRELID2Q8N945 189 aa18.66■□□□□ 0.58
CXCL3-201ENST00000296026 PPFIBP2Q8ND30 876 aa18.66■□□□□ 0.58
CXCL3-201ENST00000296026 MVB12AQ96EY5 273 aa18.66■□□□□ 0.58
CXCL3-201ENST00000296026 MMABQ96EY8 250 aaPredicted RBP18.66■□□□□ 0.58
CXCL3-201ENST00000296026 OR2A5Q96R48 311 aa18.66■□□□□ 0.58
CXCL3-201ENST00000296026 SLC30A3Q99726 388 aa18.66■□□□□ 0.58
CXCL3-201ENST00000296026 INTS10Q9NVR2 710 aaKnown RBP18.66■□□□□ 0.58
CXCL3-201ENST00000296026 SAMD15Q9P1V8 674 aa18.66■□□□□ 0.58
CXCL3-201ENST00000296026 OSGIN2Q9Y236 505 aa18.66■□□□□ 0.58
CXCL3-201ENST00000296026 DOPEY1Q5JWR5 2465 aa18.66■□□□□ 0.58
CXCL3-201ENST00000296026 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.65■□□□□ 0.58
CXCL3-201ENST00000296026 ZNF839A8K0R7 811 aa18.65■□□□□ 0.58
CXCL3-201ENST00000296026 CCNDBP1O95273 360 aa18.65■□□□□ 0.58
CXCL3-201ENST00000296026 SLC16A8O95907 504 aa18.65■□□□□ 0.58
CXCL3-201ENST00000296026 F7P08709 466 aaPredicted RBP18.65■□□□□ 0.58
CXCL3-201ENST00000296026 PRR35P0CG20 571 aa18.65■□□□□ 0.58
CXCL3-201ENST00000296026 MAGEA6P43360 314 aa18.65■□□□□ 0.58
CXCL3-201ENST00000296026 DHX34Q14147 1143 aaKnown RBP18.65■□□□□ 0.58
CXCL3-201ENST00000296026 TTLL9Q3SXZ7 439 aa18.65■□□□□ 0.58
CXCL3-201ENST00000296026 ANKRD22Q5VYY1 191 aa18.65■□□□□ 0.58
CXCL3-201ENST00000296026 ARMC3Q5W041 872 aa18.65■□□□□ 0.58
CXCL3-201ENST00000296026 ZNF470Q6ECI4 717 aa18.65■□□□□ 0.58
CXCL3-201ENST00000296026 FAAH2Q6GMR7 532 aa18.65■□□□□ 0.58
CXCL3-201ENST00000296026 ZNF425Q6IV72 752 aa18.65■□□□□ 0.58
CXCL3-201ENST00000296026 FAM180AQ6UWF9 173 aa18.65■□□□□ 0.58
CXCL3-201ENST00000296026 ZNF662Q6ZS27 426 aa18.65■□□□□ 0.58
CXCL3-201ENST00000296026 NEK10Q6ZWH5 1172 aa18.65■□□□□ 0.58
CXCL3-201ENST00000296026 CAND1Q86VP6 1230 aaKnown RBP18.65■□□□□ 0.58
CXCL3-201ENST00000296026 AMER3Q8N944 861 aa18.65■□□□□ 0.58
CXCL3-201ENST00000296026 TRIM58Q8NG06 486 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms