RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 LRIF1Q5T3J3 769 aa13.55□□□□□ -0.24
NXF1-201ENST00000294172 DOK6Q6PKX4 331 aa13.55□□□□□ -0.24
NXF1-201ENST00000294172 TBPL2Q6SJ96 375 aa13.55□□□□□ -0.24
NXF1-201ENST00000294172 ZNF547Q8IVP9 402 aa13.55□□□□□ -0.24
NXF1-201ENST00000294172 MICU2Q8IYU8 434 aa13.55□□□□□ -0.24
NXF1-201ENST00000294172 METTL25Q8N6Q8 603 aa13.55□□□□□ -0.24
NXF1-201ENST00000294172 GPR156Q8NFN8 814 aa13.55□□□□□ -0.24
NXF1-201ENST00000294172 DNAJB8Q8NHS0 232 aa13.55□□□□□ -0.24
NXF1-201ENST00000294172 CXorf40AQ8TE69 158 aa13.55□□□□□ -0.24
NXF1-201ENST00000294172 SH3GL3Q99963 347 aa13.55□□□□□ -0.24
NXF1-201ENST00000294172 CPPED1Q9BRF8 314 aaPredicted RBP13.55□□□□□ -0.24
NXF1-201ENST00000294172 UGT2B28Q9BY64 529 aa13.55□□□□□ -0.24
NXF1-201ENST00000294172 REXO4Q9GZR2 422 aaKnown RBP13.55□□□□□ -0.24
NXF1-201ENST00000294172 PNPLA3Q9NST1 481 aa13.55□□□□□ -0.24
NXF1-201ENST00000294172 OLAHQ9NV23 265 aa13.55□□□□□ -0.24
NXF1-201ENST00000294172 SPATA6Q9NWH7 488 aaPredicted RBP13.55□□□□□ -0.24
NXF1-201ENST00000294172 MAN2B2Q9Y2E5 1009 aa13.55□□□□□ -0.24
NXF1-201ENST00000294172 MYRFQ9Y2G1 1151 aa13.55□□□□□ -0.24
NXF1-201ENST00000294172 NUP210Q8TEM1 1887 aaPredicted RBP13.54□□□□□ -0.24
NXF1-201ENST00000294172 SERTM1A2A2V5 107 aa13.54□□□□□ -0.24
NXF1-201ENST00000294172 NPIPB8E9PQR5 432 aa13.54□□□□□ -0.24
NXF1-201ENST00000294172 SEC24DO94855 1032 aaPredicted RBP13.54□□□□□ -0.24
NXF1-201ENST00000294172 PBX2P40425 430 aa13.54□□□□□ -0.24
NXF1-201ENST00000294172 P2RY2P41231 377 aa13.54□□□□□ -0.24
NXF1-201ENST00000294172 WASP42768 502 aa13.54□□□□□ -0.24
NXF1-201ENST00000294172 MTHFRP42898 656 aa13.54□□□□□ -0.24
NXF1-201ENST00000294172 MAPK9P45984 424 aa13.54□□□□□ -0.24
NXF1-201ENST00000294172 ERVK-21P61565 698 aa13.54□□□□□ -0.24
NXF1-201ENST00000294172 NFE2L1Q14494 772 aa13.54□□□□□ -0.24
NXF1-201ENST00000294172 PDGFRLQ15198 375 aa13.54□□□□□ -0.24
NXF1-201ENST00000294172 NADK2Q4G0N4 442 aa13.54□□□□□ -0.24
NXF1-201ENST00000294172 CATSPEREQ5SY80 951 aa13.54□□□□□ -0.24
NXF1-201ENST00000294172 ATG9BQ674R7 924 aa13.54□□□□□ -0.24
NXF1-201ENST00000294172 CAPN13Q6MZZ7 669 aaPredicted RBP13.54□□□□□ -0.24
NXF1-201ENST00000294172 KIAA1958Q8N8K9 716 aa13.54□□□□□ -0.24
NXF1-201ENST00000294172 PLA2G15Q8NCC3 412 aa13.54□□□□□ -0.24
NXF1-201ENST00000294172 TSPAN14Q8NG11 270 aa13.54□□□□□ -0.24
NXF1-201ENST00000294172 OR7G3Q8NG95 312 aa13.54□□□□□ -0.24
NXF1-201ENST00000294172 HUS1BQ8NHY5 278 aa13.54□□□□□ -0.24
NXF1-201ENST00000294172 RMND5BQ96G75 393 aaPredicted RBP13.54□□□□□ -0.24
NXF1-201ENST00000294172 PANX1Q96RD7 426 aa13.54□□□□□ -0.24
NXF1-201ENST00000294172 YBX2Q9Y2T7 364 aaKnown RBP13.54□□□□□ -0.24
NXF1-201ENST00000294172 PCDHGA11Q9Y5H2 935 aa13.54□□□□□ -0.24
NXF1-201ENST00000294172 LRRK1Q38SD2 2015 aa13.54□□□□□ -0.24
NXF1-201ENST00000294172 DEAF1O75398 565 aaPredicted RBP13.53□□□□□ -0.24
NXF1-201ENST00000294172 PRKD3O94806 890 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 MYO1DO94832 1006 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 SCELO95171 688 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 C1QCP02747 245 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 EFNA1P20827 205 aaPredicted RBP13.53□□□□□ -0.24
NXF1-201ENST00000294172 PTPN6P29350 595 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 CNTN1Q12860 1018 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 NKG7Q16617 165 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 UGT8Q16880 541 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 ZNF658BQ4V348 819 aaPredicted RBP13.53□□□□□ -0.24
NXF1-201ENST00000294172 ZNF765Q7L2R6 523 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 DSG4Q86SJ6 1040 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 C1orf52Q8N6N3 182 aaKnown RBP13.53□□□□□ -0.24
NXF1-201ENST00000294172 NELL1Q92832 810 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 TMBIM1Q969X1 311 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 SLC47A1Q96FL8 570 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 FBXL20Q96IG2 436 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 SOX17Q9H6I2 414 aaPredicted RBP13.53□□□□□ -0.24
NXF1-201ENST00000294172 NTN4Q9HB63 628 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 PRSS16Q9NQE7 514 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 SMPD3Q9NY59 655 aaPredicted RBP13.53□□□□□ -0.24
NXF1-201ENST00000294172 UTS2RQ9UKP6 389 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 RUVBL1Q9Y265 456 aaKnown RBP13.53□□□□□ -0.24
NXF1-201ENST00000294172 AP3M1Q9Y2T2 418 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 SMIM31A0A1B0GVY4 71 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 CCDC160A6NGH7 325 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 C1QTNF3-AMACRE9PGA6 284 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 FPGTO14772 594 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 CREG1O75629 220 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 CPSF4O95639 269 aaKnown RBP13.53□□□□□ -0.24
NXF1-201ENST00000294172 SNAP29O95721 258 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 ACPPP15309 386 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 FCARP24071 287 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 OPRD1P41143 372 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 DPTQ07507 201 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 SLC14A1Q13336 389 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 APOFQ13790 326 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 SLC36A3Q495N2 470 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 VITQ6UXI7 678 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 SLCO4C1Q6ZQN7 724 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 ZNF621Q6ZSS3 439 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 EP400NLQ6ZTU2 488 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 ZNF786Q8N393 782 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 OR10Q1Q8NGQ4 319 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 NETO1Q8TDF5 533 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 GDE1Q9NZC3 331 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 SH2B3Q9UQQ2 575 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 PCYT1BQ9Y5K3 369 aaPredicted RBP13.53□□□□□ -0.24
NXF1-201ENST00000294172 MAGED1Q9Y5V3 778 aaPredicted RBP13.53□□□□□ -0.24
NXF1-201ENST00000294172 C2orf16Q68DN1 1984 aa13.53□□□□□ -0.24
NXF1-201ENST00000294172 FAM220BPB1ANY3 271 aa13.52□□□□□ -0.24
NXF1-201ENST00000294172 H3BNH8 94 aa13.52□□□□□ -0.24
NXF1-201ENST00000294172 PAPLNO95428 1278 aa13.52□□□□□ -0.24
NXF1-201ENST00000294172 SERPINA1P01009 418 aa13.52□□□□□ -0.24
NXF1-201ENST00000294172 NPPBP16860 134 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms