RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 ACVR2AP27037 513 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 PTGIRP43119 386 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 FNTBP49356 437 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 PTP4A2Q12974 167 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 ADAM15Q13444 863 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 TSTQ16762 297 aaKnown RBP10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 NDUFA9Q16795 377 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 UGT8Q16880 541 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 MYLK3Q32MK0 819 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 FBXO43Q4G163 708 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 NUP54Q7Z3B4 507 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 COX18Q8N8Q8 333 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 C7orf57Q8NEG2 295 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 TMBIM1Q969X1 311 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 LMLNQ96KR4 655 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 GDAP2Q9NXN4 497 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 TLR4O00206 839 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 ARPC2O15144 300 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 OAZ2O95190 189 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 RASGRP1O95267 797 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 SMIM10L2AP0DMW4 78 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 SMIM10L2BP0DMW5 78 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 DDX6P26196 483 aaKnown RBP eCLIP10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 DNAJA1P31689 397 aaKnown RBP10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 APLP1P51693 650 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 HNRNPDQ14103 355 aaKnown RBP10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 DPY19L1Q2PZI1 675 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 ARSHQ5FYA8 562 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 DCDC5Q6ZRR9 648 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 CD300LFQ8TDQ1 290 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 KLHL6Q8WZ60 621 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 BEX2Q9BXY8 128 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 BEX1Q9HBH7 125 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 ANKHQ9HCJ1 492 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 FARSBQ9NSD9 589 aaKnown RBP10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 CYTH4Q9UIA0 394 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 AURKAO14965 403 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 CDRT1O95170 752 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 STBD1O95210 358 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 CSF2P04141 144 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 CYP3A5P20815 502 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 AVPR1BP47901 424 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 ZNF81P51508 661 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 PLA2G16P53816 162 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 CRISP3P54108 245 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 ERVK-8P63133 956 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 TUBB3Q13509 450 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 INTS6LQ5JSJ4 861 aaKnown RBP10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 CES5AQ6NT32 575 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 MSANTD2Q6P1R3 559 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 LINGO4Q6UY18 593 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 SERPINA9Q86WD7 417 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 ANKRD13BQ86YJ7 626 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 HID1Q8IV36 788 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 CHERPQ8IWX8 916 aaKnown RBP10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 LNX2Q8N448 690 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 HDDC3Q8N4P3 179 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 SIDT2Q8NBJ9 832 aaKnown RBP10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 ZBED6CLQ96FA7 236 aaPredicted RBP10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 MTERF1Q99551 399 aaKnown RBP10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 ZDHHC18Q9NUE0 388 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 TNRC6CQ9HCJ0 1690 aaKnown RBP10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 C2orf92A0A1B0GVN3 265 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 NEMP2A6NFY4 417 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 ZNF878C9JN71 531 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 E9PAM4 449 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 NEDD8-MDP1E9PL57 170 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 NUAK1O60285 661 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 ESR1P03372 595 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 SLC35G6P0C7Q6 338 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 ZNF20P17024 532 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 ITGB5P18084 799 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 PVALBP20472 110 aaPredicted RBP10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 GABRR2P28476 465 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 RGS19P49795 217 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 PNLIPRP1P54315 467 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 ATXN7L3Q14CW9 347 aaPredicted RBP10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 DLK2Q6UY11 383 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 CHRDL2Q6WN34 429 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 DNAJB8Q8NHS0 232 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 C15orf40Q8WUR7 153 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 SLC7A6OSQ96CW6 309 aaPredicted RBP10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 SCGB3A2Q96PL1 93 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 SLC30A2Q9BRI3 323 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 FAM105AQ9NUU6 356 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 TNFRSF10DQ9UBN6 386 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 FARSAQ9Y285 508 aaKnown RBP10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 MAB21L2Q9Y586 359 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 M0R233 179 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 PPM1BO75688 479 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 TACSTD2P09758 323 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 OR1D2P34982 312 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 RHDQ02161 417 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 RPA4Q13156 261 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 PRPF38BQ5VTL8 546 aaKnown RBP10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 GARNL3Q5VVW2 1013 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 C9orf57Q5W0N0 161 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 ALG1LQ6GMV1 187 aa10.48□□□□□ -0.73
PKNOX1-201ENST00000291547 SYVN1Q86TM6 617 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms