RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 VIPP01282 170 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 GCKP35557 465 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 ARRB1P49407 418 aaPredicted RBP8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 EPHA4P54764 986 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 ZNF33BQ06732 778 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 ABRQ12979 859 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 PRKG2Q13237 762 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 E2F2Q14209 437 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 NR1D2Q14995 579 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 IYDQ6PHW0 289 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 OR2L8Q8NGY9 312 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 DLG3Q92796 817 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 BBS4Q96RK4 519 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 ELF4Q99607 663 aaPredicted RBP8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 MENTQ9BUN1 341 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 DUSP23Q9BVJ7 150 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 ARL15Q9NXU5 204 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 H2AFY2Q9P0M6 372 aaPredicted RBP8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 STOX2Q9P2F5 926 aaPredicted RBP8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 KCNK6Q9Y257 313 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 OR10H1Q9Y4A9 318 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 PIKFYVEQ9Y2I7 2098 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 A8MU76 341 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 AIM2O14862 343 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 TAPBPO15533 448 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 FOXD2O60548 495 aaPredicted RBP8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 LRP3O75074 770 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 NTRK1P04629 796 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 UMPSP11172 480 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 EPHA8P29322 1005 aaPredicted RBP8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 ACTR1BP42025 376 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 BDKRB1P46663 353 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 ARFIP2P53365 341 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 PNLIPRP1P54315 467 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 ACTR1AP61163 376 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 ABCE1P61221 599 aaKnown RBP8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 BNC1Q01954 994 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 GUCY1A3Q02108 690 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 TGM3Q08188 693 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 CUL3Q13618 768 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 CLCA4Q14CN2 919 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 NR6A1Q15406 480 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 LCTLQ6UWM7 567 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 COMMD2Q86X83 199 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 SFRP1Q8N474 314 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 LILRA3Q8N6C8 439 aaPredicted RBP8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 JPH3Q8WXH2 748 aaPredicted RBP8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 C12orf66Q96MD2 445 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 PKP4Q99569 1192 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 SGPP1Q9BX95 441 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 EPB41L1Q9H4G0 881 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 TBC1D29Q9UFV1 150 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 ADAM21Q9UKJ8 722 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 WDR37Q9Y2I8 494 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 HCN4Q9Y3Q4 1203 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 ROS1P08922 2347 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 RHPN2P1A8MT19 583 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 PNLIPP16233 465 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 SHMT2P34897 504 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 FASLGP48023 281 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 KCNC1P48547 511 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 PKNOX1P55347 436 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 STX3Q13277 289 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 GRB7Q14451 532 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 C10orf62Q5T681 223 aaPredicted RBP8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 POMZP3Q6PJE2 187 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 OR6C4Q8NGE1 309 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 MAPK15Q8TD08 544 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 ZDHHC1Q8WTX9 485 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 NAT14Q8WUY8 206 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 WDR34Q96EX3 536 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 EHD1Q9H4M9 534 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 GSTO2Q9H4Y5 243 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 ANKMY1Q9P2S6 941 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 ST14Q9Y5Y6 855 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 FAM86C2PA6NEL3 165 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 LILRA5A6NI73 299 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 E2F3O00716 465 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 BGNP21810 368 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 EEF1DP29692 281 aaKnown RBP8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 LSP1P33241 339 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 GMPRP36959 345 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 LCP2Q13094 533 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 SRSF5Q13243 272 aaKnown RBP8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 SHBQ15464 509 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 PGS1Q32NB8 556 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 UNC50Q53HI1 259 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 C6orf132Q5T0Z8 1188 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 EFL1Q7Z2Z2 1120 aaKnown RBP8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 LRRC34Q8IZ02 419 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 CLYBLQ8N0X4 340 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 CAMK1GQ96NX5 476 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 ZNF317Q96PQ6 595 aaPredicted RBP8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 ZNF382Q96SR6 550 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 EPN3Q9H201 632 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 SLC32A1Q9H598 525 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 PRDM8Q9NQV8 689 aa8.15□□□□□ -1.1
PTPDC1-201ENST00000288976 TSC22D4Q9Y3Q8 395 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms