RNA–Protein interactions for RNA: ENST00000287543.4

MALSU1-201, Transcript of mitochondrial assembly of ribosomal large subunit 1, humanhuman

TSL 2

Gene MALSU1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALSU1-201ENST00000287543 PRPF4O43172 522 aaKnown RBP eCLIP18.1■□□□□ 0.49
MALSU1-201ENST00000287543 ITGAXP20702 1163 aa18.1■□□□□ 0.49
MALSU1-201ENST00000287543 IMPA1P29218 277 aa18.1■□□□□ 0.49
MALSU1-201ENST00000287543 CCL11P51671 97 aa18.1■□□□□ 0.49
MALSU1-201ENST00000287543 CDKN2DP55273 166 aa18.1■□□□□ 0.49
MALSU1-201ENST00000287543 NFKB2Q00653 900 aa18.1■□□□□ 0.49
MALSU1-201ENST00000287543 TIAL1Q01085 375 aaKnown RBP eCLIP18.1■□□□□ 0.492e-7■■■□□ 14.8
MALSU1-201ENST00000287543 CAV1Q03135 178 aa18.1■□□□□ 0.49
MALSU1-201ENST00000287543 RBM20Q5T481 1227 aaKnown RBP18.1■□□□□ 0.49
MALSU1-201ENST00000287543 GARNL3Q5VVW2 1013 aa18.1■□□□□ 0.49
MALSU1-201ENST00000287543 ZNF425Q6IV72 752 aa18.1■□□□□ 0.49
MALSU1-201ENST00000287543 ANKMY2Q8IV38 441 aa18.1■□□□□ 0.49
MALSU1-201ENST00000287543 ZBED8Q8IZ13 594 aa18.1■□□□□ 0.49
MALSU1-201ENST00000287543 TEX19Q8NA77 164 aa18.1■□□□□ 0.49
MALSU1-201ENST00000287543 PYROXD1Q8WU10 500 aa18.1■□□□□ 0.49
MALSU1-201ENST00000287543 MVB12AQ96EY5 273 aa18.1■□□□□ 0.49
MALSU1-201ENST00000287543 LINGO1Q96FE5 620 aa18.1■□□□□ 0.49
MALSU1-201ENST00000287543 PDLIM5Q96HC4 596 aaKnown RBP18.1■□□□□ 0.49
MALSU1-201ENST00000287543 RAB17Q9H0T7 212 aa18.1■□□□□ 0.49
MALSU1-201ENST00000287543 SLC6A20Q9NP91 592 aa18.1■□□□□ 0.49
MALSU1-201ENST00000287543 TP53TG5Q9Y2B4 290 aa18.1■□□□□ 0.49
MALSU1-201ENST00000287543 PIKFYVEQ9Y2I7 2098 aa18.1■□□□□ 0.49
MALSU1-201ENST00000287543 ATMQ13315 3056 aa18.09■□□□□ 0.49
MALSU1-201ENST00000287543 H0YGG7 62 aa18.09■□□□□ 0.49
MALSU1-201ENST00000287543 EIF2S1P05198 315 aaKnown RBP18.09■□□□□ 0.49
MALSU1-201ENST00000287543 ENO2P09104 434 aaPredicted RBP18.09■□□□□ 0.49
MALSU1-201ENST00000287543 FDXRP22570 491 aa18.09■□□□□ 0.49
MALSU1-201ENST00000287543 OTX2P32243 289 aa18.09■□□□□ 0.49
MALSU1-201ENST00000287543 CASRP41180 1078 aa18.09■□□□□ 0.49
MALSU1-201ENST00000287543 PGDP52209 483 aa18.09■□□□□ 0.49
MALSU1-201ENST00000287543 AP1S2P56377 157 aa18.09■□□□□ 0.49
MALSU1-201ENST00000287543 ARF3P61204 181 aaPredicted RBP18.09■□□□□ 0.49
MALSU1-201ENST00000287543 FRMPD2BQ6IN97 320 aa18.09■□□□□ 0.49
MALSU1-201ENST00000287543 CYS1Q717R9 158 aa18.09■□□□□ 0.49
MALSU1-201ENST00000287543 ADCK2Q7Z695 626 aa18.09■□□□□ 0.49
MALSU1-201ENST00000287543 LRRC56Q8IYG6 542 aaPredicted RBP18.09■□□□□ 0.49
MALSU1-201ENST00000287543 PPFIBP2Q8ND30 876 aa18.09■□□□□ 0.49
MALSU1-201ENST00000287543 ATL1Q8WXF7 558 aa18.09■□□□□ 0.49
MALSU1-201ENST00000287543 ANKRD7Q92527 254 aa18.09■□□□□ 0.49
MALSU1-201ENST00000287543 CDKL2Q92772 493 aa18.09■□□□□ 0.49
MALSU1-201ENST00000287543 THAP11Q96EK4 314 aa18.09■□□□□ 0.49
MALSU1-201ENST00000287543 VPS39Q96JC1 886 aa18.09■□□□□ 0.49
MALSU1-201ENST00000287543 WDR83Q9BRX9 315 aaKnown RBP18.09■□□□□ 0.49
MALSU1-201ENST00000287543 TRIM55Q9BYV6 548 aa18.09■□□□□ 0.49
MALSU1-201ENST00000287543 PHACTR1Q9C0D0 580 aa18.09■□□□□ 0.49
MALSU1-201ENST00000287543 TMEM184CQ9NVA4 438 aa18.09■□□□□ 0.49
MALSU1-201ENST00000287543 STOX2Q9P2F5 926 aaPredicted RBP18.09■□□□□ 0.49
MALSU1-201ENST00000287543 PDE10AQ9Y233 779 aa18.09■□□□□ 0.49
MALSU1-201ENST00000287543 LOC105369274A0A096LPK9 316 aa18.08■□□□□ 0.48
MALSU1-201ENST00000287543 LOC102723532A0A0G2JNH3 316 aa18.08■□□□□ 0.48
MALSU1-201ENST00000287543 RAD51CO43502 376 aa18.08■□□□□ 0.48
MALSU1-201ENST00000287543 CEACAM4O75871 244 aa18.08■□□□□ 0.48
MALSU1-201ENST00000287543 GSTA2P09210 222 aa18.08■□□□□ 0.48
MALSU1-201ENST00000287543 CKAP4Q07065 602 aaKnown RBP18.08■□□□□ 0.48
MALSU1-201ENST00000287543 PRTGQ2VWP7 1150 aa18.08■□□□□ 0.48
MALSU1-201ENST00000287543 DUPD1Q68J44 220 aa18.08■□□□□ 0.48
MALSU1-201ENST00000287543 AGTRAPQ6RW13 159 aa18.08■□□□□ 0.48
MALSU1-201ENST00000287543 STRA8Q7Z7C7 330 aa18.08■□□□□ 0.48
MALSU1-201ENST00000287543 MRGPREQ86SM8 312 aa18.08■□□□□ 0.48
MALSU1-201ENST00000287543 OR4N4Q8N0Y3 316 aa18.08■□□□□ 0.48
MALSU1-201ENST00000287543 NKAPQ8N5F7 415 aaKnown RBP18.08■□□□□ 0.48
MALSU1-201ENST00000287543 CSNK1A1LQ8N752 337 aa18.08■□□□□ 0.48
MALSU1-201ENST00000287543 CLEC1AQ8NC01 280 aa18.08■□□□□ 0.48
MALSU1-201ENST00000287543 OR2A5Q96R48 311 aa18.08■□□□□ 0.48
MALSU1-201ENST00000287543 FAM129AQ9BZQ8 928 aa18.08■□□□□ 0.48
MALSU1-201ENST00000287543 DPH5Q9H2P9 285 aa18.08■□□□□ 0.48
MALSU1-201ENST00000287543 ZNF304Q9HCX3 659 aa18.08■□□□□ 0.48
MALSU1-201ENST00000287543 MLXIPLQ9NP71 852 aa18.08■□□□□ 0.48
MALSU1-201ENST00000287543 SLC22A11Q9NSA0 550 aa18.08■□□□□ 0.48
MALSU1-201ENST00000287543 ZNF451Q9Y4E5 1061 aa18.08■□□□□ 0.48
MALSU1-201ENST00000287543 IGKV1-8A0A0C4DH67 115 aa18.07■□□□□ 0.48
MALSU1-201ENST00000287543 DNAJB5O75953 348 aa18.07■□□□□ 0.48
MALSU1-201ENST00000287543 OCA2Q04671 838 aa18.07■□□□□ 0.48
MALSU1-201ENST00000287543 ATP1A4Q13733 1029 aa18.07■□□□□ 0.48
MALSU1-201ENST00000287543 SLC9A5Q14940 896 aa18.07■□□□□ 0.48
MALSU1-201ENST00000287543 NDUFA9Q16795 377 aa18.07■□□□□ 0.48
MALSU1-201ENST00000287543 PRAMEF13Q5VWM6 474 aa18.07■□□□□ 0.48
MALSU1-201ENST00000287543 CPZQ66K79 652 aa18.07■□□□□ 0.48
MALSU1-201ENST00000287543 CAPN13Q6MZZ7 669 aaPredicted RBP18.07■□□□□ 0.48
MALSU1-201ENST00000287543 ZNF572Q7Z3I7 529 aaPredicted RBP18.07■□□□□ 0.48
MALSU1-201ENST00000287543 COL26A1Q96A83 441 aa18.07■□□□□ 0.48
MALSU1-201ENST00000287543 CABS1Q96KC9 395 aa18.07■□□□□ 0.48
MALSU1-201ENST00000287543 HAUS8Q9BT25 410 aa18.07■□□□□ 0.48
MALSU1-201ENST00000287543 ABCF3Q9NUQ8 709 aa18.07■□□□□ 0.48
MALSU1-201ENST00000287543 TXNDC16Q9P2K2 825 aa18.07■□□□□ 0.48
MALSU1-201ENST00000287543 ADAMTS6Q9UKP5 1117 aa18.07■□□□□ 0.48
MALSU1-201ENST00000287543 NOVA2Q9UNW9 492 aaKnown RBP18.07■□□□□ 0.48
MALSU1-201ENST00000287543 KCNE1BA0A087WTH5 132 aa18.06■□□□□ 0.48
MALSU1-201ENST00000287543 H7BY64 318 aa18.06■□□□□ 0.48
MALSU1-201ENST00000287543 KALRNO60229 2985 aa18.06■□□□□ 0.48
MALSU1-201ENST00000287543 WISP1O95388 367 aa18.06■□□□□ 0.48
MALSU1-201ENST00000287543 TSPAN12O95859 305 aa18.06■□□□□ 0.48
MALSU1-201ENST00000287543 MMP11P24347 488 aa18.06■□□□□ 0.48
MALSU1-201ENST00000287543 GRK3P35626 688 aa18.06■□□□□ 0.48
MALSU1-201ENST00000287543 CSRP3P50461 194 aa18.06■□□□□ 0.48
MALSU1-201ENST00000287543 RPS15AP62244 130 aaKnown RBP18.06■□□□□ 0.48
MALSU1-201ENST00000287543 TBPL1P62380 186 aa18.06■□□□□ 0.48
MALSU1-201ENST00000287543 YBX1P67809 324 aaKnown RBP18.06■□□□□ 0.48
MALSU1-201ENST00000287543 KCNC4Q03721 635 aa18.06■□□□□ 0.48
MALSU1-201ENST00000287543 C2orf54Q08AI8 447 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms