RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 CAMK2GQ13555 558 aaPredicted RBP13.03□□□□□ -0.32
SCAF4-201ENST00000286835 CARD16Q5EG05 197 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 XKR4Q5GH76 650 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 CTSL3PQ5NE16 218 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 MANEALQ5VSG8 457 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 SLC34A3Q8N130 599 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 CAMKK1Q8N5S9 505 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 TCF25Q9BQ70 676 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 RNF167Q9H6Y7 350 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 ERVK-11Q9UQG0 969 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 SLC22A14Q9Y267 594 aa13.03□□□□□ -0.32
SCAF4-201ENST00000286835 C5orf58C9J3I9 102 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 GBAP04062 536 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 FAM163BP0C2L3 166 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 TACR1P25103 407 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 KRT20P35900 424 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 PPP2R2BQ00005 443 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 CHIT1Q13231 466 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 XKR7Q5GH72 579 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 HECTD3Q5T447 861 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 SUSD1Q6UWL2 747 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 CACUL1Q86Y37 369 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 FAM217AQ8IXS0 508 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 MINDY2Q8NBR6 621 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 AUTS2Q8WXX7 1259 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 SH3KBP1Q96B97 665 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 RNF38Q9H0F5 515 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 CERS4Q9HA82 394 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 GPR83Q9NYM4 423 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 RAB23Q9ULC3 237 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 SAGE2PA6NJ88 616 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 SOBPA7XYQ1 873 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 CCNDBP1O95273 360 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 CYBAP13498 195 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 SMAD3P84022 425 aaKnown RBP13.02□□□□□ -0.32
SCAF4-201ENST00000286835 ABHD18Q0P651 414 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 ACOX1Q15067 660 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 CTF1Q16619 201 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 ARHGAP15Q53QZ3 475 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.02□□□□□ -0.32
SCAF4-201ENST00000286835 DPP10Q8N608 796 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 MTERF3Q96E29 417 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 MYO19Q96H55 970 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 OR51E2Q9H255 320 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 TP63Q9H3D4 680 aaPredicted RBP13.02□□□□□ -0.32
SCAF4-201ENST00000286835 SNTG1Q9NSN8 517 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 KLHL3Q9UH77 587 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 DHRS7Q9Y394 339 aa13.02□□□□□ -0.32
SCAF4-201ENST00000286835 GLYATL1P3A0A0U1RQE8 302 aa13.02□□□□□ -0.33
SCAF4-201ENST00000286835 OR7A17O14581 309 aa13.02□□□□□ -0.33
SCAF4-201ENST00000286835 TLL1O43897 1013 aa13.02□□□□□ -0.33
SCAF4-201ENST00000286835 NPRL3Q12980 569 aa13.02□□□□□ -0.33
SCAF4-201ENST00000286835 DPY19L1Q2PZI1 675 aa13.02□□□□□ -0.33
SCAF4-201ENST00000286835 POM121L1PQ3SYA9 428 aa13.02□□□□□ -0.33
SCAF4-201ENST00000286835 PTCHD4Q6ZW05 846 aa13.02□□□□□ -0.33
SCAF4-201ENST00000286835 GPR65Q8IYL9 337 aa13.02□□□□□ -0.33
SCAF4-201ENST00000286835 CLECL1Q8IZS7 167 aa13.02□□□□□ -0.33
SCAF4-201ENST00000286835 PAPD5Q8NDF8 572 aaKnown RBP13.02□□□□□ -0.33
SCAF4-201ENST00000286835 GPR150Q8NGU9 434 aa13.02□□□□□ -0.33
SCAF4-201ENST00000286835 PSKH2Q96QS6 385 aa13.02□□□□□ -0.33
SCAF4-201ENST00000286835 TRIT1Q9H3H1 467 aaKnown RBP13.02□□□□□ -0.33
SCAF4-201ENST00000286835 ACOT13Q9NPJ3 140 aa13.02□□□□□ -0.33
SCAF4-201ENST00000286835 RHCGQ9UBD6 479 aa13.02□□□□□ -0.33
SCAF4-201ENST00000286835 AP3M1Q9Y2T2 418 aa13.02□□□□□ -0.33
SCAF4-201ENST00000286835 PCDHB1Q9Y5F3 818 aa13.02□□□□□ -0.33
SCAF4-201ENST00000286835 PRR23AA6NEV1 266 aa13.02□□□□□ -0.33
SCAF4-201ENST00000286835 ZW10O43264 779 aa13.02□□□□□ -0.33
SCAF4-201ENST00000286835 HTR1AP08908 422 aa13.02□□□□□ -0.33
SCAF4-201ENST00000286835 CDKN2CP42773 168 aa13.02□□□□□ -0.33
SCAF4-201ENST00000286835 ZNF140P52738 457 aaPredicted RBP13.02□□□□□ -0.33
SCAF4-201ENST00000286835 PDZK1Q5T2W1 519 aa13.02□□□□□ -0.33
SCAF4-201ENST00000286835 GTF2IRD2BQ6EKJ0 949 aa13.02□□□□□ -0.33
SCAF4-201ENST00000286835 TYW3Q6IPR3 259 aaKnown RBP13.02□□□□□ -0.33
SCAF4-201ENST00000286835 EIF3MQ7L2H7 374 aaKnown RBP13.02□□□□□ -0.33
SCAF4-201ENST00000286835 GTF2IRD2Q86UP8 949 aa13.02□□□□□ -0.33
SCAF4-201ENST00000286835 PHF10Q8WUB8 498 aaKnown RBP13.02□□□□□ -0.33
SCAF4-201ENST00000286835 SLC38A4Q969I6 547 aa13.02□□□□□ -0.33
SCAF4-201ENST00000286835 CD244Q9BZW8 370 aa13.02□□□□□ -0.33
SCAF4-201ENST00000286835 GORASP2Q9H8Y8 452 aa13.02□□□□□ -0.33
SCAF4-201ENST00000286835 HEBP1Q9NRV9 189 aa13.02□□□□□ -0.33
SCAF4-201ENST00000286835 TOR4AQ9NXH8 423 aa13.02□□□□□ -0.33
SCAF4-201ENST00000286835 TEKT2Q9UIF3 430 aa13.02□□□□□ -0.33
SCAF4-201ENST00000286835 ZNF197O14709 1029 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 ARHGEF9O43307 516 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 TMCC2O75069 709 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 GJB5O95377 273 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 PEX11BO96011 259 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 CSRP3P50461 194 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 DAPP51397 102 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 TSTQ16762 297 aaKnown RBP13.01□□□□□ -0.33
SCAF4-201ENST00000286835 USP43Q70EL4 1123 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 NPAS4Q8IUM7 802 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 FAM9CQ8IZT9 166 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 SIX5Q8N196 739 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 SLC25A37Q9NYZ2 338 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 PCDHB8Q9UN66 801 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 MAP4K5Q9Y4K4 846 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 DOCK1Q14185 1865 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 TRIP12Q14669 1992 aaPredicted RBP13.01□□□□□ -0.33
SCAF4-201ENST00000286835 UPK1AO00322 258 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms