RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 SLBPQ14493 270 aaKnown RBP eCLIP17.35■□□□□ 0.37
CAPN1-201ENST00000279247 CCDC85BQ15834 202 aaPredicted RBP17.35■□□□□ 0.37
CAPN1-201ENST00000279247 GGTA1PQ4G0N0 100 aa17.35■□□□□ 0.37
CAPN1-201ENST00000279247 OTUD3Q5T2D3 398 aaPredicted RBP17.35■□□□□ 0.37
CAPN1-201ENST00000279247 AGBL4Q5VU57 503 aa17.35■□□□□ 0.37
CAPN1-201ENST00000279247 GALNT10Q86SR1 603 aa17.35■□□□□ 0.37
CAPN1-201ENST00000279247 TICAM1Q8IUC6 712 aa17.35■□□□□ 0.37
CAPN1-201ENST00000279247 CLECL1Q8IZS7 167 aa17.35■□□□□ 0.37
CAPN1-201ENST00000279247 RFXANKO14593 260 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 PAPLNO95428 1278 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 ABCB1P08183 1280 aaPredicted RBP17.34■□□□□ 0.37
CAPN1-201ENST00000279247 LINGO3P0C6S8 592 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 MRPL19P49406 292 aaKnown RBP17.34■□□□□ 0.37
CAPN1-201ENST00000279247 VASPP50552 380 aaPredicted RBP17.34■□□□□ 0.37
CAPN1-201ENST00000279247 CYP4F2P78329 520 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 CDK3Q00526 305 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 LIPJQ5W064 366 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 FBXL12Q9NXK8 326 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 A0A1B0GTW7 788 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 SLC31A1O15431 190 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 AASDHQ4L235 1098 aaPredicted RBP17.34■□□□□ 0.37
CAPN1-201ENST00000279247 ZNF621Q6ZSS3 439 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 GLB1L3Q8NCI6 653 aaPredicted RBP17.34■□□□□ 0.37
CAPN1-201ENST00000279247 OR9A1PQ8NGU1 263 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 BTBD9Q96Q07 612 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 PANX1Q96RD7 426 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 CHID1Q9BWS9 393 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 Q9H521 79 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 UTS2RQ9UKP6 389 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 DYRK1BQ9Y463 629 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 DYTNA2CJ06 578 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 A6NHS1 94 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 CLIC3O95833 236 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 NPPBP16860 134 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 ZNF23P17027 643 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 TMEM52BQ4KMG9 183 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 ENPP6Q6UWR7 440 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 C11orf96Q7Z7L8 435 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 WDR20Q8TBZ3 569 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 TFGQ92734 400 aaPredicted RBP17.34■□□□□ 0.37
CAPN1-201ENST00000279247 FAM162AQ96A26 154 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 FAM120BQ96EK7 910 aaKnown RBP17.34■□□□□ 0.37
CAPN1-201ENST00000279247 GBP5Q96PP8 586 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 SOX17Q9H6I2 414 aaPredicted RBP17.34■□□□□ 0.37
CAPN1-201ENST00000279247 TRPV4Q9HBA0 871 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 SH3BP4Q9P0V3 963 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 KCNK6Q9Y257 313 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 BTBD3Q9Y2F9 522 aa17.34■□□□□ 0.37
CAPN1-201ENST00000279247 MYO10Q9HD67 2058 aa17.33■□□□□ 0.37
CAPN1-201ENST00000279247 MGAT4DA6NG13 374 aa17.33■□□□□ 0.37
CAPN1-201ENST00000279247 SEC24DO94855 1032 aaPredicted RBP17.33■□□□□ 0.37
CAPN1-201ENST00000279247 ANXA4P09525 319 aaPredicted RBP17.33■□□□□ 0.37
CAPN1-201ENST00000279247 KIR3DL1P43629 444 aa17.33■□□□□ 0.37
CAPN1-201ENST00000279247 CLCNKAP51800 687 aa17.33■□□□□ 0.37
CAPN1-201ENST00000279247 SLC14A1Q13336 389 aa17.33■□□□□ 0.37
CAPN1-201ENST00000279247 LAPTM5Q13571 262 aa17.33■□□□□ 0.37
CAPN1-201ENST00000279247 TMEM214Q6NUQ4 689 aaKnown RBP17.33■□□□□ 0.37
CAPN1-201ENST00000279247 EPHX4Q8IUS5 362 aa17.33■□□□□ 0.37
CAPN1-201ENST00000279247 TRPV3Q8NET8 790 aa17.33■□□□□ 0.37
CAPN1-201ENST00000279247 OR56A3Q8NH54 315 aa17.33■□□□□ 0.37
CAPN1-201ENST00000279247 EZH1Q92800 747 aaPredicted RBP17.33■□□□□ 0.37
CAPN1-201ENST00000279247 SH3KBP1Q96B97 665 aa17.33■□□□□ 0.37
CAPN1-201ENST00000279247 ZDHHC5Q9C0B5 715 aa17.33■□□□□ 0.37
CAPN1-201ENST00000279247 TTYH1Q9H313 450 aaPredicted RBP17.33■□□□□ 0.37
CAPN1-201ENST00000279247 ADGRE2Q9UHX3 823 aa17.33■□□□□ 0.37
CAPN1-201ENST00000279247 PLEKHM1Q9Y4G2 1056 aa17.33■□□□□ 0.37
CAPN1-201ENST00000279247 HNRNPRO43390 633 aaKnown RBP17.33■□□□□ 0.36
CAPN1-201ENST00000279247 PRPS2P11908 318 aa17.33■□□□□ 0.36
CAPN1-201ENST00000279247 PAX7P23759 505 aa17.33■□□□□ 0.36
CAPN1-201ENST00000279247 PSMB5P28074 263 aa17.33■□□□□ 0.36
CAPN1-201ENST00000279247 HTR1EP28566 365 aa17.33■□□□□ 0.36
CAPN1-201ENST00000279247 CHN2P52757 468 aa17.33■□□□□ 0.36
CAPN1-201ENST00000279247 TAP2Q03519 686 aa17.33■□□□□ 0.36
CAPN1-201ENST00000279247 DPTQ07507 201 aa17.33■□□□□ 0.36
CAPN1-201ENST00000279247 BCL7AQ4VC05 210 aa17.33■□□□□ 0.36
CAPN1-201ENST00000279247 OR52E8Q6IFG1 317 aa17.33■□□□□ 0.36
CAPN1-201ENST00000279247 XKR5Q6UX68 686 aa17.33■□□□□ 0.36
CAPN1-201ENST00000279247 ANGPTL8Q6UXH0 198 aa17.33■□□□□ 0.36
CAPN1-201ENST00000279247 OR2L2Q8NH16 312 aa17.33■□□□□ 0.36
CAPN1-201ENST00000279247 ARMC1Q9NVT9 282 aa17.33■□□□□ 0.36
CAPN1-201ENST00000279247 OBP2AQ9NY56 170 aa17.33■□□□□ 0.36
CAPN1-201ENST00000279247 MAGED1Q9Y5V3 778 aaPredicted RBP17.33■□□□□ 0.36
CAPN1-201ENST00000279247 TCRBV5S2A0A599 114 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 STATHP02808 62 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 NTRK1P04629 796 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 LAMP1P11279 417 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 MAPK1P28482 360 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 FGL2Q14314 439 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 TTC23LQ6PF05 361 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 SLCO4C1Q6ZQN7 724 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 NUDT18Q6ZVK8 323 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 SNX19Q92543 992 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 PRPF18Q99633 342 aaKnown RBP17.32■□□□□ 0.36
CAPN1-201ENST00000279247 SORBS1Q9BX66 1292 aaKnown RBP17.32■□□□□ 0.36
CAPN1-201ENST00000279247 CD93Q9NPY3 652 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 PCDHGA11Q9Y5H2 935 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 TBC1D3DA0A087WVF3 549 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 TBC1D3IA0A087WXS9 549 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 TBC1D3EA0A087X179 549 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 TBC1D3KA0A087X1G2 549 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms