RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 ROPN1LQ96C74 230 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 REPS1Q96D71 796 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 SLC45A3Q96JT2 553 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 RAB11FIP5Q9BXF6 653 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 TMEM168Q9H0V1 697 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 KIR3DX1Q9H7L2 352 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 MAP10Q9P2G4 905 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 PCDHGA7Q9Y5G6 932 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 PIPSLA2A3N6 862 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 C9JVG2 144 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 EML2O95834 649 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 PRPS2P11908 318 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 BCKDHAP12694 445 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 AMD1P17707 334 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 AK4P27144 223 aaPredicted RBP15.79■□□□□ 0.12
TPM1-201ENST00000267996 DPP6P42658 865 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 KCNK10P57789 538 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 TLR1Q15399 786 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 THEMIS2Q5TEJ8 643 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 CACHD1Q5VU97 1274 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 BNC2Q6ZN30 1099 aaPredicted RBP15.79■□□□□ 0.12
TPM1-201ENST00000267996 RD3Q7Z3Z2 195 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 NRROSQ86YC3 692 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 RNF175Q8N4F7 328 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 C2orf73Q8N5S3 287 aaPredicted RBP15.79■□□□□ 0.12
TPM1-201ENST00000267996 ABHD11Q8NFV4 315 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 C11orf24Q96F05 449 aaPredicted RBP15.79■□□□□ 0.12
TPM1-201ENST00000267996 APIPQ96GX9 242 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 PELI2Q9HAT8 420 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 VPS29Q9UBQ0 182 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 SPTY2D1-AS1A0A0U1RR47 76 aa15.78■□□□□ 0.12
TPM1-201ENST00000267996 ASPDHA6ND91 283 aa15.78■□□□□ 0.12
TPM1-201ENST00000267996 METTL12A8MUP2 240 aa15.78■□□□□ 0.12
TPM1-201ENST00000267996 FOXE1O00358 373 aaPredicted RBP15.78■□□□□ 0.12
TPM1-201ENST00000267996 EEDO75530 441 aaKnown RBP15.78■□□□□ 0.12
TPM1-201ENST00000267996 CIB2O75838 187 aa15.78■□□□□ 0.12
TPM1-201ENST00000267996 RASGRP1O95267 797 aa15.78■□□□□ 0.12
TPM1-201ENST00000267996 TNFP01375 233 aa15.78■□□□□ 0.12
TPM1-201ENST00000267996 CDH1P12830 882 aa15.78■□□□□ 0.12
TPM1-201ENST00000267996 PSME3P61289 254 aa15.78■□□□□ 0.12
TPM1-201ENST00000267996 MTAPQ13126 283 aa15.78■□□□□ 0.12
TPM1-201ENST00000267996 EIF2B5Q13144 721 aaKnown RBP15.78■□□□□ 0.12
TPM1-201ENST00000267996 KPNB1Q14974 876 aaKnown RBP15.78■□□□□ 0.12
TPM1-201ENST00000267996 TRMT5Q32P41 509 aaKnown RBP15.78■□□□□ 0.12
TPM1-201ENST00000267996 PIGGQ5H8A4 983 aa15.78■□□□□ 0.12
TPM1-201ENST00000267996 C17orf64Q86WR6 236 aa15.78■□□□□ 0.12
TPM1-201ENST00000267996 HID1Q8IV36 788 aa15.78■□□□□ 0.12
TPM1-201ENST00000267996 LIX1Q8N485 282 aa15.78■□□□□ 0.12
TPM1-201ENST00000267996 CADM4Q8NFZ8 388 aa15.78■□□□□ 0.12
TPM1-201ENST00000267996 OR52E1Q8NGJ3 308 aa15.78■□□□□ 0.12
TPM1-201ENST00000267996 CCL4L1Q8NHW4 92 aa15.78■□□□□ 0.12
TPM1-201ENST00000267996 HUS1BQ8NHY5 278 aa15.78■□□□□ 0.12
TPM1-201ENST00000267996 CDRT15Q96T59 188 aa15.78■□□□□ 0.12
TPM1-201ENST00000267996 MTERF1Q99551 399 aaKnown RBP15.78■□□□□ 0.12
TPM1-201ENST00000267996 ICKQ9UPZ9 632 aa15.78■□□□□ 0.12
TPM1-201ENST00000267996 DLGAP4Q9Y2H0 992 aa15.78■□□□□ 0.12
TPM1-201ENST00000267996 COLEC10Q9Y6Z7 277 aa15.78■□□□□ 0.12
TPM1-201ENST00000267996 MAGEB17A8MXT2 336 aa15.77■□□□□ 0.12
TPM1-201ENST00000267996 ANGPT2O15123 496 aa15.77■□□□□ 0.12
TPM1-201ENST00000267996 THEGLP0DJG4 465 aa15.77■□□□□ 0.12
TPM1-201ENST00000267996 NDUFS1P28331 727 aa15.77■□□□□ 0.12
TPM1-201ENST00000267996 MAPK1P28482 360 aa15.77■□□□□ 0.12
TPM1-201ENST00000267996 ACTR1BP42025 376 aa15.77■□□□□ 0.12
TPM1-201ENST00000267996 ACTR1AP61163 376 aa15.77■□□□□ 0.12
TPM1-201ENST00000267996 FZD2Q14332 565 aa15.77■□□□□ 0.12
TPM1-201ENST00000267996 KRT33BQ14525 404 aa15.77■□□□□ 0.12
TPM1-201ENST00000267996 HIST2H2ACQ16777 129 aaPredicted RBP15.77■□□□□ 0.12
TPM1-201ENST00000267996 HIST2H2AA3Q6FI13 130 aa15.77■□□□□ 0.12
TPM1-201ENST00000267996 ADNP2Q6IQ32 1131 aa15.77■□□□□ 0.12
TPM1-201ENST00000267996 FAM9CQ8IZT9 166 aa15.77■□□□□ 0.12
TPM1-201ENST00000267996 GLB1L3Q8NCI6 653 aaPredicted RBP15.77■□□□□ 0.12
TPM1-201ENST00000267996 OR4K1Q8NGD4 311 aa15.77■□□□□ 0.12
TPM1-201ENST00000267996 GPBAR1Q8TDU6 330 aa15.77■□□□□ 0.12
TPM1-201ENST00000267996 UBE2E3Q969T4 207 aa15.77■□□□□ 0.12
TPM1-201ENST00000267996 SERPINI1Q99574 410 aa15.77■□□□□ 0.12
TPM1-201ENST00000267996 GPATCH1Q9BRR8 931 aaKnown RBP15.77■□□□□ 0.12
TPM1-201ENST00000267996 SPNS1Q9H2V7 528 aa15.77■□□□□ 0.12
TPM1-201ENST00000267996 ZNF624Q9P2J8 865 aaPredicted RBP15.77■□□□□ 0.12
TPM1-201ENST00000267996 THEGQ9P2T0 379 aa15.77■□□□□ 0.12
TPM1-201ENST00000267996 TAC3Q9UHF0 121 aa15.77■□□□□ 0.12
TPM1-201ENST00000267996 BAIAP2L1Q9UHR4 511 aa15.77■□□□□ 0.12
TPM1-201ENST00000267996 CROTQ9UKG9 612 aa15.77■□□□□ 0.12
TPM1-201ENST00000267996 PPT2Q9UMR5 302 aa15.77■□□□□ 0.12
TPM1-201ENST00000267996 SLCO1B1Q9Y6L6 691 aa15.77■□□□□ 0.12
TPM1-201ENST00000267996 PLXND1Q9Y4D7 1925 aa15.77■□□□□ 0.12
TPM1-201ENST00000267996 CCDC154A6NI56 674 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 FXYD1O00168 92 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 PRICKLE3O43900 615 aaPredicted RBP15.76■□□□□ 0.11
TPM1-201ENST00000267996 ENTPD5O75356 428 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 PDE5AO76074 875 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 ETHE1O95571 254 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 CD27P26842 260 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 PIK3CBP42338 1070 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 PXNP49023 591 aaPredicted RBP15.76■□□□□ 0.11
TPM1-201ENST00000267996 CLDN8P56748 225 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 ACTR3P61158 418 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 PTGR1Q14914 329 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 ZNF423Q2M1K9 1284 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 HPS6Q86YV9 775 aa15.76■□□□□ 0.11
TPM1-201ENST00000267996 VPS33AQ96AX1 596 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms