RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 SMG8Q8ND04 991 aaKnown RBP11.82□□□□□ -0.52
SRRM4-201ENST00000267260 STON2Q8WXE9 905 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 HSPBAP1Q96EW2 488 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 ADAD1Q96M93 576 aaKnown RBP11.82□□□□□ -0.52
SRRM4-201ENST00000267260 RTFDC1Q9BY42 306 aaPredicted RBP11.82□□□□□ -0.52
SRRM4-201ENST00000267260 ERVK-11Q9UQG0 969 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 PIRTP0C851 137 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 CTNNB1P35222 781 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 CD79BP40259 229 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 TAS2R50P59544 299 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 FMO1Q01740 532 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 PLPPR4Q7Z2D5 763 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 FAM129CQ86XR2 697 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 PDZD9Q8IXQ8 264 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 IRGQQ8WZA9 623 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 RAI2Q9Y5P3 530 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 RIMS1Q86UR5 1692 aaKnown RBP11.82□□□□□ -0.52
SRRM4-201ENST00000267260 NPPAP01160 153 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 HCKP08631 526 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 CRISP1P54107 249 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 SLC29A4Q7RTT9 530 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 PIGZQ86VD9 579 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 AVL9Q8NBF6 648 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 SLC38A3Q99624 504 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 TBL1XR1Q9BZK7 514 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 MRPS30Q9NP92 439 aaKnown RBP11.82□□□□□ -0.52
SRRM4-201ENST00000267260 RFPL1O75677 317 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 ABRAXAS2Q15018 415 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 NTRK3Q16288 839 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 IQCHQ86VS3 1027 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 ARHGAP12Q8IWW6 846 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 ZMIZ2Q8NF64 920 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 ORAI3Q9BRQ5 295 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 NLGN3Q9NZ94 848 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 LRRC42Q9Y546 428 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 TRAV6A0A075B6T7 132 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 LOC100130705A0A1B0GUX0 176 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 F5H0A9 414 aaPredicted RBP11.82□□□□□ -0.52
SRRM4-201ENST00000267260 SHOX2O60902 331 aaPredicted RBP11.82□□□□□ -0.52
SRRM4-201ENST00000267260 BANF1O75531 89 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 GJB6O95452 261 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 CXCR1P25024 350 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 BMP8BP34820 402 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 PTGER3P43115 390 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 RAB4BP61018 213 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 ZNF404Q494X3 552 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 C9orf57Q5W0N0 161 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 GET4Q7L5D6 327 aaPredicted RBP11.82□□□□□ -0.52
SRRM4-201ENST00000267260 BMP8AQ7Z5Y6 402 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 CMC1Q7Z7K0 106 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 MYPNQ86TC9 1320 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 SNX29P2Q8IUI4 249 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 LAS2Q8IYD9 372 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 LINC00116Q8NCU8 138 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 OR5T2Q8NGG2 359 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 PEX13Q92968 403 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 FCRL2Q96LA5 508 aaPredicted RBP11.82□□□□□ -0.52
SRRM4-201ENST00000267260 CCDC106Q9BWC9 280 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 TAS2R14Q9NYV8 317 aa11.82□□□□□ -0.52
SRRM4-201ENST00000267260 TTLL8A6PVC2 850 aa11.81□□□□□ -0.52
SRRM4-201ENST00000267260 NDST2P52849 883 aa11.81□□□□□ -0.52
SRRM4-201ENST00000267260 NADK2Q4G0N4 442 aa11.81□□□□□ -0.52
SRRM4-201ENST00000267260 TMCO2Q7Z6W1 182 aaPredicted RBP11.81□□□□□ -0.52
SRRM4-201ENST00000267260 CENPSQ8N2Z9 138 aa11.81□□□□□ -0.52
SRRM4-201ENST00000267260 JAGN1Q8N5M9 183 aa11.81□□□□□ -0.52
SRRM4-201ENST00000267260 ZNF283Q8N7M2 679 aa11.81□□□□□ -0.52
SRRM4-201ENST00000267260 UPF1Q92900 1129 aaKnown RBP eCLIP11.81□□□□□ -0.52
SRRM4-201ENST00000267260 DGAT2Q96PD7 388 aa11.81□□□□□ -0.52
SRRM4-201ENST00000267260 CD180Q99467 661 aa11.81□□□□□ -0.52
SRRM4-201ENST00000267260 LGALS13Q9UHV8 139 aa11.81□□□□□ -0.52
SRRM4-201ENST00000267260 FBXW2Q9UKT8 454 aa11.81□□□□□ -0.52
SRRM4-201ENST00000267260 BUD23O43709 281 aaKnown RBP11.81□□□□□ -0.52
SRRM4-201ENST00000267260 BCAS1O75363 584 aaPredicted RBP11.81□□□□□ -0.52
SRRM4-201ENST00000267260 BCKDHAP12694 445 aa11.81□□□□□ -0.52
SRRM4-201ENST00000267260 CRYBB1P53674 252 aaPredicted RBP11.81□□□□□ -0.52
SRRM4-201ENST00000267260 NCS1P62166 190 aa11.81□□□□□ -0.52
SRRM4-201ENST00000267260 FGL2Q14314 439 aa11.81□□□□□ -0.52
SRRM4-201ENST00000267260 NKAPLQ5M9Q1 402 aa11.81□□□□□ -0.52
SRRM4-201ENST00000267260 GPR151Q8TDV0 419 aa11.81□□□□□ -0.52
SRRM4-201ENST00000267260 RGMAQ96B86 450 aa11.81□□□□□ -0.52
SRRM4-201ENST00000267260 ASB9Q96DX5 294 aa11.81□□□□□ -0.52
SRRM4-201ENST00000267260 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.81□□□□□ -0.52
SRRM4-201ENST00000267260 LAMP5Q9UJQ1 280 aa11.81□□□□□ -0.52
SRRM4-201ENST00000267260 UBR1Q8IWV7 1749 aa11.81□□□□□ -0.52
SRRM4-201ENST00000267260 OAZ2O95190 189 aa11.81□□□□□ -0.52
SRRM4-201ENST00000267260 LGALS2P05162 132 aa11.81□□□□□ -0.52
SRRM4-201ENST00000267260 HOXD8P13378 290 aaPredicted RBP11.81□□□□□ -0.52
SRRM4-201ENST00000267260 EN1Q05925 392 aaPredicted RBP11.81□□□□□ -0.52
SRRM4-201ENST00000267260 KHDC1Q4VXA5 237 aaKnown RBP11.81□□□□□ -0.52
SRRM4-201ENST00000267260 CLEC6AQ6EIG7 209 aa11.81□□□□□ -0.52
SRRM4-201ENST00000267260 SHKBP1Q8TBC3 707 aa11.81□□□□□ -0.52
SRRM4-201ENST00000267260 RIPOR3Q96MK2 946 aa11.81□□□□□ -0.52
SRRM4-201ENST00000267260 C7orf50Q9BRJ6 194 aaKnown RBP11.81□□□□□ -0.52
SRRM4-201ENST00000267260 MAGED1Q9Y5V3 778 aaPredicted RBP11.81□□□□□ -0.52
SRRM4-201ENST00000267260 HTR3EA5X5Y0 456 aa11.81□□□□□ -0.52
SRRM4-201ENST00000267260 ZNF16P17020 682 aaPredicted RBP11.81□□□□□ -0.52
SRRM4-201ENST00000267260 ERVK-21P61565 698 aa11.81□□□□□ -0.52
SRRM4-201ENST00000267260 TMEM214Q6NUQ4 689 aaKnown RBP11.81□□□□□ -0.52
SRRM4-201ENST00000267260 TSPAN33Q86UF1 283 aa11.81□□□□□ -0.52
SRRM4-201ENST00000267260 MARCH9Q86YJ5 346 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms