RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 GPR107Q5VW38 600 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 CES5AQ6NT32 575 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 TMEM26Q6ZUK4 368 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 ZNF551Q7Z340 670 aaPredicted RBP12.5□□□□□ -0.41
CPSF6-201ENST00000266679 THOC6Q86W42 341 aaKnown RBP12.5□□□□□ -0.41
CPSF6-201ENST00000266679 HOMEZQ8IX15 550 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 FAM9CQ8IZT9 166 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 SVOPLQ8N434 492 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 LILRA3Q8N6C8 439 aaPredicted RBP12.5□□□□□ -0.41
CPSF6-201ENST00000266679 ZNF366Q8N895 744 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 MED8Q96G25 268 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 DCUN1D5Q9BTE7 237 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 OSBPL10Q9BXB5 764 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 YTHDF1Q9BYJ9 559 aaKnown RBP12.5□□□□□ -0.41
CPSF6-201ENST00000266679 REXO4Q9GZR2 422 aaKnown RBP12.5□□□□□ -0.41
CPSF6-201ENST00000266679 ATXN10Q9UBB4 475 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 TMX2-CTNND1H3BSU7 103 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 HS6ST1O60243 411 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 SH3BGRLO75368 114 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 CTSLP07711 333 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 LINC00271P0C7V0 271 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 CTNNB1P35222 781 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 POLR2IP36954 125 aaKnown RBP12.5□□□□□ -0.41
CPSF6-201ENST00000266679 PIGAP37287 484 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 KIR3DL1P43629 444 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 DCDC1P59894 354 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 ABHD18Q0P651 414 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 LRRC23Q53EV4 343 aaPredicted RBP12.5□□□□□ -0.41
CPSF6-201ENST00000266679 ARHGAP15Q53QZ3 475 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 NEK10Q6ZWH5 1172 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 C8orf59Q8N0T1 100 aaPredicted RBP12.5□□□□□ -0.41
CPSF6-201ENST00000266679 EID3Q8N140 333 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 ZCCHC7Q8N3Z6 543 aaKnown RBP12.5□□□□□ -0.41
CPSF6-201ENST00000266679 TRAM1L1Q8N609 369 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 DDHD1Q8NEL9 900 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 ZNF555Q8NEP9 628 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 OR52E4Q8NGH9 312 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 FRS2Q8WU20 508 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 ASZ1Q8WWH4 475 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 REXO5Q96IC2 774 aaKnown RBP12.5□□□□□ -0.41
CPSF6-201ENST00000266679 MRGPRX3Q96LB0 322 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 MTERF1Q99551 399 aaKnown RBP12.5□□□□□ -0.41
CPSF6-201ENST00000266679 MAGIXQ9H6Y5 334 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 FAM118AQ9NWS6 357 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 FPGTO14772 594 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 AP2A2O94973 939 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 ZNF682O95780 498 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 RHOP08100 348 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 COX7A2P14406 83 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 PRKACGP22612 351 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 CTSCP53634 463 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 HPCAP84074 193 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 PPP2R2BQ00005 443 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 GPM6BQ13491 265 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 SPIDRQ14159 915 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 DMC1Q14565 340 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 ZNF77Q15935 545 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 ZNF284Q2VY69 593 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 HENMT1Q5T8I9 393 aaKnown RBP12.49□□□□□ -0.41
CPSF6-201ENST00000266679 ANKRD26P1Q6NSI1 321 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 ZNF773Q6PK81 442 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 ARHGAP22Q7Z5H3 698 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 THAP5Q7Z6K1 395 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 GALNT10Q86SR1 603 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 ADHFE1Q8IWW8 467 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 OR5K1Q8NHB7 308 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 CSGALNACT1Q8TDX6 532 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 RBM4BQ9BQ04 359 aaKnown RBP12.49□□□□□ -0.41
CPSF6-201ENST00000266679 RBM4Q9BWF3 364 aaKnown RBP12.49□□□□□ -0.41
CPSF6-201ENST00000266679 AMBRA1Q9C0C7 1298 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 ADNPQ9H2P0 1102 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 USE1Q9NZ43 259 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 IL36AQ9UHA7 158 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 ITM2BQ9Y287 266 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 HCFC2Q9Y5Z7 792 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 U3KQV3 271 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 NOTCH4Q99466 2003 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 KIAA1549LQ6ZVL6 1849 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 RECQL5O94762 991 aaPredicted RBP12.49□□□□□ -0.41
CPSF6-201ENST00000266679 CPSF4O95639 269 aaKnown RBP12.49□□□□□ -0.41
CPSF6-201ENST00000266679 EFNA1P20827 205 aaPredicted RBP12.49□□□□□ -0.41
CPSF6-201ENST00000266679 DCTP40126 519 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 MAPK10P53779 464 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 CSTF3Q12996 717 aaKnown RBP12.49□□□□□ -0.41
CPSF6-201ENST00000266679 NAE1Q13564 534 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 DOC2AQ14183 400 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 UGT8Q16880 541 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 DUOXA1Q1HG43 343 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 TTC23Q5W5X9 447 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 RASGEF1AQ8N9B8 481 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 GAB3Q8WWW8 586 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 SGCDQ92629 289 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 PYURFQ96I23 114 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 RDH12Q96NR8 316 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 NAA50Q9GZZ1 169 aaKnown RBP12.49□□□□□ -0.41
CPSF6-201ENST00000266679 FANCEQ9HB96 536 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 THG1LQ9NWX6 298 aaKnown RBP12.49□□□□□ -0.41
CPSF6-201ENST00000266679 VNN3Q9NY84 501 aa12.49□□□□□ -0.41
CPSF6-201ENST00000266679 STOX2Q9P2F5 926 aaPredicted RBP12.49□□□□□ -0.41
CPSF6-201ENST00000266679 H3BMQ9 156 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms