RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 CNIH3Q8TBE1 160 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 NCLNQ969V3 563 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 C11orf24Q96F05 449 aaPredicted RBP12.08□□□□□ -0.48
BEST3-201ENST00000266661 VMP1Q96GC9 406 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 SH3YL1Q96HL8 342 aaPredicted RBP12.08□□□□□ -0.48
BEST3-201ENST00000266661 TSSK3Q96PN8 268 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 SIGLEC11Q96RL6 698 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 ZNF347Q96SE7 839 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 TM9SF3Q9HD45 589 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 ARL15Q9NXU5 204 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 BAG5Q9UL15 447 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 SNX6Q9UNH7 406 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 ABCG2Q9UNQ0 655 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 PCDHGA10Q9Y5H3 936 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 COL6A3P12111 3177 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 ABHD14A-ACY1A0A1B0GW23 586 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 FUOMA2VDF0 154 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 SLC16A5O15375 505 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 XPNPEP2O43895 674 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 DPM1O60762 260 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 XYLBO75191 536 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 C8GP07360 202 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 HNRNPCP07910 306 aaKnown RBP eCLIP12.08□□□□□ -0.48
BEST3-201ENST00000266661 FSHRP23945 695 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 IDUAP35475 653 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 OPRL1P41146 370 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 ALDH7A1P49419 539 aaKnown RBP12.08□□□□□ -0.48
BEST3-201ENST00000266661 RAB33AQ14088 237 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 UGT8Q16880 541 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 PTCHD3Q3KNS1 767 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 MPP7Q5T2T1 576 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 OR4F3Q6IEY1 312 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 OR2T5Q6IEZ7 315 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 NOXRED1Q6NXP6 359 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 DOK6Q6PKX4 331 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 UBE2R2Q712K3 238 aaPredicted RBP12.08□□□□□ -0.48
BEST3-201ENST00000266661 VRK3Q8IV63 474 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 OR2AP1Q8NGE2 309 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 OR2T29Q8NH02 315 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 FIBINQ8TAL6 211 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 ITFG2Q969R8 447 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 COPS8Q99627 209 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 BTBD2Q9BX70 525 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 AKIP1Q9NQ31 210 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 AASDHPPTQ9NRN7 309 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 CHCHD3Q9NX63 227 aaKnown RBP12.08□□□□□ -0.48
BEST3-201ENST00000266661 ERVK-18Q9QC07 812 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 NDRG4Q9ULP0 352 aaKnown RBP12.08□□□□□ -0.48
BEST3-201ENST00000266661 SAMD4AQ9UPU9 718 aaKnown RBP12.08□□□□□ -0.48
BEST3-201ENST00000266661 COQ6Q9Y2Z9 468 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 CPQQ9Y646 472 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 U3KQV3 271 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 MYO7AQ13402 2215 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 A8MX80 341 aa12.07□□□□□ -0.48
BEST3-201ENST00000266661 PRMT3O60678 531 aa12.07□□□□□ -0.48
BEST3-201ENST00000266661 E2F6O75461 281 aa12.07□□□□□ -0.48
BEST3-201ENST00000266661 IGSF6O95976 241 aa12.07□□□□□ -0.48
BEST3-201ENST00000266661 SOD2P04179 222 aa12.07□□□□□ -0.48
BEST3-201ENST00000266661 IGFBP5P24593 272 aa12.07□□□□□ -0.48
BEST3-201ENST00000266661 MAPK1P28482 360 aa12.07□□□□□ -0.48
BEST3-201ENST00000266661 CD70P32970 193 aa12.07□□□□□ -0.48
BEST3-201ENST00000266661 BMP8BP34820 402 aa12.07□□□□□ -0.48
BEST3-201ENST00000266661 MASP1P48740 699 aa12.07□□□□□ -0.48
BEST3-201ENST00000266661 HNMTP50135 292 aa12.07□□□□□ -0.48
BEST3-201ENST00000266661 TPD52P55327 224 aaPredicted RBP12.07□□□□□ -0.48
BEST3-201ENST00000266661 RELAQ04206 551 aa12.07□□□□□ -0.48
BEST3-201ENST00000266661 ZNF33BQ06732 778 aa12.07□□□□□ -0.48
BEST3-201ENST00000266661 DUOXA1Q1HG43 343 aa12.07□□□□□ -0.48
BEST3-201ENST00000266661 VMACQ2NL98 169 aa12.07□□□□□ -0.48
BEST3-201ENST00000266661 PLEKHG6Q3KR16 790 aa12.07□□□□□ -0.48
BEST3-201ENST00000266661 SYT6Q5T7P8 510 aaPredicted RBP12.07□□□□□ -0.48
BEST3-201ENST00000266661 PRPF38BQ5VTL8 546 aaKnown RBP12.07□□□□□ -0.48
BEST3-201ENST00000266661 LRRC66Q68CR7 880 aa12.07□□□□□ -0.48
BEST3-201ENST00000266661 TXNDC8Q6A555 127 aa12.07□□□□□ -0.48
BEST3-201ENST00000266661 HTR3DQ70Z44 454 aa12.07□□□□□ -0.48
BEST3-201ENST00000266661 PIWIL3Q7Z3Z3 882 aaKnown RBP12.07□□□□□ -0.48
BEST3-201ENST00000266661 METTL3Q86U44 580 aaKnown RBP12.07□□□□□ -0.48
BEST3-201ENST00000266661 ZBTB46Q86UZ6 589 aa12.07□□□□□ -0.48
BEST3-201ENST00000266661 SLC22A15Q8IZD6 547 aa12.07□□□□□ -0.48
BEST3-201ENST00000266661 NAT16Q8N8M0 369 aa12.07□□□□□ -0.48
BEST3-201ENST00000266661 CCDC138Q96M89 665 aa12.07□□□□□ -0.48
BEST3-201ENST00000266661 SNX5Q9Y5X3 404 aa12.07□□□□□ -0.48
BEST3-201ENST00000266661 PIKFYVEQ9Y2I7 2098 aa12.07□□□□□ -0.48
BEST3-201ENST00000266661 OBSL1O75147 1896 aa12.06□□□□□ -0.48
BEST3-201ENST00000266661 TMEM229AB2RXF0 380 aa12.06□□□□□ -0.48
BEST3-201ENST00000266661 PTGES3LE9PB15 166 aa12.06□□□□□ -0.48
BEST3-201ENST00000266661 SOX1O00570 391 aaPredicted RBP12.06□□□□□ -0.48
BEST3-201ENST00000266661 RFXANKO14593 260 aa12.06□□□□□ -0.48
BEST3-201ENST00000266661 YY2O15391 372 aa12.06□□□□□ -0.48
BEST3-201ENST00000266661 SGTAO43765 313 aa12.06□□□□□ -0.48
BEST3-201ENST00000266661 MRPS14O60783 128 aaKnown RBP12.06□□□□□ -0.48
BEST3-201ENST00000266661 JRKO75564 520 aa12.06□□□□□ -0.48
BEST3-201ENST00000266661 ANGPTL1O95841 491 aa12.06□□□□□ -0.48
BEST3-201ENST00000266661 FTH1P02794 183 aa12.06□□□□□ -0.48
BEST3-201ENST00000266661 C1SP09871 688 aa12.06□□□□□ -0.48
BEST3-201ENST00000266661 SRCP12931 536 aa12.06□□□□□ -0.48
BEST3-201ENST00000266661 JUPP14923 745 aa12.06□□□□□ -0.48
BEST3-201ENST00000266661 CD22P20273 847 aa12.06□□□□□ -0.48
BEST3-201ENST00000266661 PRPS1L1P21108 318 aa12.06□□□□□ -0.48
BEST3-201ENST00000266661 FPR1P21462 350 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms