RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 OR52A4PA6NMU1 304 aa14.02□□□□□ -0.16
PDLIM2-201ENST00000265810 HNRNPRO43390 633 aaKnown RBP14.02□□□□□ -0.16
PDLIM2-201ENST00000265810 AOAHP28039 575 aa14.02□□□□□ -0.16
PDLIM2-201ENST00000265810 HTR6P50406 440 aa14.02□□□□□ -0.16
PDLIM2-201ENST00000265810 ELOCQ15369 112 aa14.02□□□□□ -0.16
PDLIM2-201ENST00000265810 SPESP1Q6UW49 350 aa14.02□□□□□ -0.16
PDLIM2-201ENST00000265810 Q6ZSR6 202 aa14.02□□□□□ -0.16
PDLIM2-201ENST00000265810 PLPP6Q8IY26 295 aa14.02□□□□□ -0.16
PDLIM2-201ENST00000265810 NCSTNQ92542 709 aa14.02□□□□□ -0.16
PDLIM2-201ENST00000265810 LRRC58Q96CX6 371 aa14.02□□□□□ -0.16
PDLIM2-201ENST00000265810 SORT1Q99523 831 aa14.02□□□□□ -0.16
PDLIM2-201ENST00000265810 ZNF184Q99676 751 aaPredicted RBP14.02□□□□□ -0.16
PDLIM2-201ENST00000265810 GEMIN8Q9NWZ8 242 aaKnown RBP14.02□□□□□ -0.16
PDLIM2-201ENST00000265810 EURLQ9NYK6 297 aa14.02□□□□□ -0.16
PDLIM2-201ENST00000265810 KLHL33A6NCF5 533 aa14.02□□□□□ -0.17
PDLIM2-201ENST00000265810 MT-ND1P03886 318 aa14.02□□□□□ -0.17
PDLIM2-201ENST00000265810 DUS1LQ6P1R4 473 aaKnown RBP14.02□□□□□ -0.17
PDLIM2-201ENST00000265810 RNF168Q8IYW5 571 aaPredicted RBP14.02□□□□□ -0.17
PDLIM2-201ENST00000265810 DDHD1Q8NEL9 900 aa14.02□□□□□ -0.17
PDLIM2-201ENST00000265810 ADAMTS15Q8TE58 950 aa14.02□□□□□ -0.17
PDLIM2-201ENST00000265810 UTP15Q8TED0 518 aaKnown RBP14.02□□□□□ -0.17
PDLIM2-201ENST00000265810 RPP25Q9BUL9 199 aaKnown RBP14.02□□□□□ -0.17
PDLIM2-201ENST00000265810 MEAF6Q9HAF1 191 aa14.02□□□□□ -0.17
PDLIM2-201ENST00000265810 SCN3BQ9NY72 215 aa14.02□□□□□ -0.17
PDLIM2-201ENST00000265810 TMED5Q9Y3A6 229 aa14.02□□□□□ -0.17
PDLIM2-201ENST00000265810 A0A1W2PRB8 838 aa14.02□□□□□ -0.17
PDLIM2-201ENST00000265810 SUV39H1O43463 412 aa14.02□□□□□ -0.17
PDLIM2-201ENST00000265810 SMNDC1O75940 238 aaKnown RBP eCLIP14.02□□□□□ -0.17
PDLIM2-201ENST00000265810 CST1P01037 141 aa14.02□□□□□ -0.17
PDLIM2-201ENST00000265810 MYCLP1P12525 358 aaPredicted RBP14.02□□□□□ -0.17
PDLIM2-201ENST00000265810 PRDX3P30048 256 aaKnown RBP14.02□□□□□ -0.17
PDLIM2-201ENST00000265810 FOXM1Q08050 763 aa14.02□□□□□ -0.17
PDLIM2-201ENST00000265810 PWP1Q13610 501 aa14.02□□□□□ -0.17
PDLIM2-201ENST00000265810 PCBP2Q15366 365 aaKnown RBP eCLIP14.02□□□□□ -0.179e-7■■■■□ 24.1
PDLIM2-201ENST00000265810 PRSS58Q8IYP2 241 aa14.02□□□□□ -0.17
PDLIM2-201ENST00000265810 MVB12BQ9H7P6 319 aa14.02□□□□□ -0.17
PDLIM2-201ENST00000265810 S100A14Q9HCY8 104 aa14.02□□□□□ -0.17
PDLIM2-201ENST00000265810 H2AFY2Q9P0M6 372 aaPredicted RBP14.02□□□□□ -0.17
PDLIM2-201ENST00000265810 CNOT6Q9ULM6 557 aaKnown RBP14.02□□□□□ -0.17
PDLIM2-201ENST00000265810 ARHGEF33A8MVX0 844 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 GFRA2O00451 464 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 B3GALT2O43825 422 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 NUAK1O60285 661 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 PGRP06401 933 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 CCR4P51679 360 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 CLEC14AQ86T13 490 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 HCAR2Q8TDS4 363 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 PIGKQ92643 395 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 FOXA1P55317 472 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 TAS2R50P59544 299 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 XIAPP98170 497 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 LETMD1Q6P1Q0 360 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 MIPOL1Q8TD10 442 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 SLC9A6Q92581 669 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 BIRC8Q96P09 236 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 PRDM8Q9NQV8 689 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 SUFUQ9UMX1 484 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 C15orf41Q9Y2V0 281 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 NUMA1Q14980 2115 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 A0A1W2PP18 115 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 CLOCKO15516 846 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 PDPK1O15530 556 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 JUPP14923 745 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 RABIFP47224 123 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 BTN3A2P78410 334 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 UNC5DQ6UXZ4 953 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 PQLC1Q8N2U9 271 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 DEFB123Q8N688 67 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 ADAMTS19Q8TE59 1207 aa14.01□□□□□ -0.17
PDLIM2-201ENST00000265810 A8MU76 341 aa14□□□□□ -0.17
PDLIM2-201ENST00000265810 FAM220BPB1ANY3 271 aa14□□□□□ -0.17
PDLIM2-201ENST00000265810 E7ENX8 843 aa14□□□□□ -0.17
PDLIM2-201ENST00000265810 CLDN4O14493 209 aa14□□□□□ -0.17
PDLIM2-201ENST00000265810 PRLHRP49683 370 aa14□□□□□ -0.17
PDLIM2-201ENST00000265810 GALNT1Q10472 559 aaPredicted RBP14□□□□□ -0.17
PDLIM2-201ENST00000265810 ADAM15Q13444 863 aa14□□□□□ -0.17
PDLIM2-201ENST00000265810 COL9A2Q14055 689 aaPredicted RBP14□□□□□ -0.17
PDLIM2-201ENST00000265810 GNA13Q14344 377 aa14□□□□□ -0.17
PDLIM2-201ENST00000265810 WSCD2Q2TBF2 565 aa14□□□□□ -0.17
PDLIM2-201ENST00000265810 ISLR2Q6UXK2 745 aa14□□□□□ -0.17
PDLIM2-201ENST00000265810 CAMKVQ8NCB2 501 aa14□□□□□ -0.17
PDLIM2-201ENST00000265810 PREBQ9HCU5 417 aa14□□□□□ -0.17
PDLIM2-201ENST00000265810 SRCAPQ6ZRS2 3230 aa14□□□□□ -0.17
PDLIM2-201ENST00000265810 OR6C74A6NCV1 312 aa14□□□□□ -0.17
PDLIM2-201ENST00000265810 SERPINB7O75635 380 aa14□□□□□ -0.17
PDLIM2-201ENST00000265810 ZXDBP98169 803 aa14□□□□□ -0.17
PDLIM2-201ENST00000265810 RPA4Q13156 261 aa14□□□□□ -0.17
PDLIM2-201ENST00000265810 AMIGO1Q86WK6 493 aa14□□□□□ -0.17
PDLIM2-201ENST00000265810 TRPV3Q8NET8 790 aa14□□□□□ -0.17
PDLIM2-201ENST00000265810 ZBED6CLQ96FA7 236 aaPredicted RBP14□□□□□ -0.17
PDLIM2-201ENST00000265810 RBM18Q96H35 190 aaKnown RBP14□□□□□ -0.17
PDLIM2-201ENST00000265810 CGREF1Q99674 301 aa14□□□□□ -0.17
PDLIM2-201ENST00000265810 DPH7Q9BTV6 452 aa14□□□□□ -0.17
PDLIM2-201ENST00000265810 SPATA5L1Q9BVQ7 753 aa14□□□□□ -0.17
PDLIM2-201ENST00000265810 CCDC106Q9BWC9 280 aa14□□□□□ -0.17
PDLIM2-201ENST00000265810 REXO4Q9GZR2 422 aaKnown RBP14□□□□□ -0.17
PDLIM2-201ENST00000265810 RMI1Q9H9A7 625 aa14□□□□□ -0.17
PDLIM2-201ENST00000265810 GPR34Q9UPC5 381 aa14□□□□□ -0.17
PDLIM2-201ENST00000265810 PRAMEF26H0Y7S4 382 aa14□□□□□ -0.17
PDLIM2-201ENST00000265810 NUDT14O95848 222 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms