RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 ARMCX6Q7L4S7 300 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 C11orf74Q86VG3 221 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 PIANPQ8IYJ0 282 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 CYP4Z2PQ8N1L4 340 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 USP7Q93009 1102 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 TRNT1Q96Q11 434 aaKnown RBP12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 INPP5KQ9BT40 448 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 SLC22A4Q9H015 551 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 FBXO44Q9H4M3 255 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 RUBCNLQ9H714 662 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 ASAH2Q9NR71 780 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 ERVK13-1Q9NX77 482 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 STMN3Q9NZ72 180 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 PCDHB5Q9Y5E4 795 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 EP400Q96L91 3159 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 CASTOR2A6NHX0 329 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 EIF3FO00303 357 aaPredicted RBP12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 EPN2O95208 641 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 DNTTP04053 509 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 STSP08842 583 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 IL7P13232 177 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 ANXA8P13928 327 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 PTPN6P29350 595 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 CDKN1CP49918 316 aaPredicted RBP12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 SCN1BQ07699 218 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 FCHO2Q0JRZ9 810 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 IRF3Q14653 427 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 C18orf21Q32NC0 220 aaPredicted RBP12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 SGO1Q5FBB7 561 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 NXNL2Q5VZ03 156 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 OVOS1Q6IE37 1185 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 XKRXQ6PP77 449 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 GDPGP1Q6ZNW5 385 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 ZNF438Q7Z4V0 828 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 TRIM69Q86WT6 500 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 CPA6Q8N4T0 437 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 GPRC5AQ8NFJ5 357 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 MDGA1Q8NFP4 955 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 UBTD2Q8WUN7 234 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 IGSF8Q969P0 613 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 MYOCQ99972 504 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 ABHD16BQ9H3Z7 469 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 NSUN3Q9H649 340 aaKnown RBP12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 SMURF1Q9HCE7 757 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 FAM105AQ9NUU6 356 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 FKBPLQ9UIM3 349 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 AGO1Q9UL18 857 aaKnown RBP12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 SNX7Q9UNH6 387 aa12.03□□□□□ -0.48
CHMP2B-201ENST00000263780 CCDC182A6NF36 153 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 CLIC1O00299 241 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 CCRL2O00421 344 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 ARHGAP33O14559 1287 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 GJB3O75712 270 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 B3GAT3O94766 335 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 DIRAS1O95057 198 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 VIPP01282 170 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 HSMCR30P0CW71 290 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 EPB42P16452 691 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 ITGB6P18564 788 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 HOXD11P31277 338 aaPredicted RBP12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 GRK5P34947 590 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 ACVRL1P37023 503 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 PGFP49763 221 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 P2RX3P56373 397 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 GALK2Q01415 458 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 ST3GAL4Q11206 333 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 DUOXA1Q1HG43 343 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 SNAP47Q5SQN1 464 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 RAP1GAP2Q684P5 730 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 C19orf48Q6RUI8 117 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 CERS6Q6ZMG9 384 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 TMPRSS11AQ6ZMR5 421 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 LRRTM3Q86VH5 581 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 CACTIN-AS1Q8N1I8 211 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 C10orf111Q8N326 155 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 CLHC1Q8NHS4 586 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 DMRTB1Q96MA1 342 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 KCNC2Q96PR1 638 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 KCNS3Q9BQ31 491 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 TTPALQ9BTX7 342 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 CINPQ9BW66 212 aaPredicted RBP12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 ADGRE3Q9BY15 652 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 RACGAP1Q9H0H5 632 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 IRF2BPLQ9H1B7 796 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 ENOPH1Q9UHY7 261 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 POFUT2Q9Y2G5 429 aa12.02□□□□□ -0.48
CHMP2B-201ENST00000263780 TNS1Q9HBL0 1735 aaKnown RBP12.02□□□□□ -0.49
CHMP2B-201ENST00000263780 H7C0S8 307 aa12.02□□□□□ -0.49
CHMP2B-201ENST00000263780 ADAMDEC1O15204 470 aa12.02□□□□□ -0.49
CHMP2B-201ENST00000263780 INSIG1O15503 277 aa12.02□□□□□ -0.49
CHMP2B-201ENST00000263780 TAPBPO15533 448 aa12.02□□□□□ -0.49
CHMP2B-201ENST00000263780 ABCB1P08183 1280 aaPredicted RBP12.02□□□□□ -0.49
CHMP2B-201ENST00000263780 ACPPP15309 386 aa12.02□□□□□ -0.49
CHMP2B-201ENST00000263780 GPX2P18283 190 aa12.02□□□□□ -0.49
CHMP2B-201ENST00000263780 DGKAP23743 735 aa12.02□□□□□ -0.49
CHMP2B-201ENST00000263780 RUNX1T1Q06455 604 aa12.02□□□□□ -0.49
CHMP2B-201ENST00000263780 GNASQ5JWF2 1037 aa12.02□□□□□ -0.49
CHMP2B-201ENST00000263780 PTRHD1Q6GMV3 140 aaKnown RBP12.02□□□□□ -0.49
CHMP2B-201ENST00000263780 EFHBQ8N7U6 833 aa12.02□□□□□ -0.49
CHMP2B-201ENST00000263780 PSKH2Q96QS6 385 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms