RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 U3KQA8 63 aa26.55■■□□□ 1.84
SMARCD3-201ENST00000262188 EP300Q09472 2414 aaPredicted RBP26.55■■□□□ 1.84
SMARCD3-201ENST00000262188 OR6C74A6NCV1 312 aa26.55■■□□□ 1.84
SMARCD3-201ENST00000262188 K7EPI3 171 aa26.55■■□□□ 1.84
SMARCD3-201ENST00000262188 GSTT1P30711 240 aa26.55■■□□□ 1.84
SMARCD3-201ENST00000262188 SLC1A6P48664 564 aa26.55■■□□□ 1.84
SMARCD3-201ENST00000262188 PHEXP78562 749 aa26.55■■□□□ 1.84
SMARCD3-201ENST00000262188 CLCQ05315 142 aa26.55■■□□□ 1.84
SMARCD3-201ENST00000262188 CCDC92Q53HC0 331 aaPredicted RBP26.55■■□□□ 1.84
SMARCD3-201ENST00000262188 ZNF438Q7Z4V0 828 aa26.55■■□□□ 1.84
SMARCD3-201ENST00000262188 EDEM2Q9BV94 578 aa26.55■■□□□ 1.84
SMARCD3-201ENST00000262188 SPATA7Q9P0W8 599 aa26.55■■□□□ 1.84
SMARCD3-201ENST00000262188 MAGEA13PA6NCF6 341 aa26.54■■□□□ 1.84
SMARCD3-201ENST00000262188 PCDHGA12O60330 932 aa26.54■■□□□ 1.84
SMARCD3-201ENST00000262188 PPP1CAP62136 330 aa26.54■■□□□ 1.84
SMARCD3-201ENST00000262188 SF3A3Q12874 501 aaKnown RBP eCLIP26.54■■□□□ 1.84
SMARCD3-201ENST00000262188 GSTA3Q16772 222 aa26.54■■□□□ 1.84
SMARCD3-201ENST00000262188 ZCCHC8Q6NZY4 707 aaKnown RBP26.54■■□□□ 1.84
SMARCD3-201ENST00000262188 ADGRF3Q8IZF5 1079 aa26.54■■□□□ 1.84
SMARCD3-201ENST00000262188 OR2L8Q8NGY9 312 aa26.54■■□□□ 1.84
SMARCD3-201ENST00000262188 SREK1Q8WXA9 508 aaKnown RBP26.54■■□□□ 1.84
SMARCD3-201ENST00000262188 RSC1A1Q92681 617 aa26.54■■□□□ 1.84
SMARCD3-201ENST00000262188 SORT1Q99523 831 aa26.54■■□□□ 1.84
SMARCD3-201ENST00000262188 C1QTNF3Q9BXJ4 246 aa26.54■■□□□ 1.84
SMARCD3-201ENST00000262188 SLC32A1Q9H598 525 aa26.54■■□□□ 1.84
SMARCD3-201ENST00000262188 CCDC177Q9NQR7 707 aaPredicted RBP26.54■■□□□ 1.84
SMARCD3-201ENST00000262188 TAC3Q9UHF0 121 aa26.54■■□□□ 1.84
SMARCD3-201ENST00000262188 TNPO3Q9Y5L0 923 aaKnown RBP26.54■■□□□ 1.84
SMARCD3-201ENST00000262188 PRAMEF4O60810 478 aa26.53■■□□□ 1.84
SMARCD3-201ENST00000262188 POLR2CP19387 275 aaPredicted RBP26.53■■□□□ 1.84
SMARCD3-201ENST00000262188 ABCE1P61221 599 aaKnown RBP26.53■■□□□ 1.84
SMARCD3-201ENST00000262188 RCN2Q14257 317 aa26.53■■□□□ 1.84
SMARCD3-201ENST00000262188 RBBP7Q16576 425 aa26.53■■□□□ 1.84
SMARCD3-201ENST00000262188 WASHC2DQ5SRD0 308 aa26.53■■□□□ 1.84
SMARCD3-201ENST00000262188 PRAMEF9Q5VWM5 478 aa26.53■■□□□ 1.84
SMARCD3-201ENST00000262188 SH3KBP1Q96B97 665 aa26.53■■□□□ 1.84
SMARCD3-201ENST00000262188 GBP5Q96PP8 586 aa26.53■■□□□ 1.84
SMARCD3-201ENST00000262188 SGPP1Q9BX95 441 aa26.53■■□□□ 1.84
SMARCD3-201ENST00000262188 IPPKQ9H8X2 491 aa26.53■■□□□ 1.84
SMARCD3-201ENST00000262188 ANGPTL3Q9Y5C1 460 aa26.53■■□□□ 1.84
SMARCD3-201ENST00000262188 ASXL3Q9C0F0 2248 aa26.53■■□□□ 1.84
SMARCD3-201ENST00000262188 OR7A17O14581 309 aa26.53■■□□□ 1.84
SMARCD3-201ENST00000262188 GDF9O60383 454 aa26.53■■□□□ 1.84
SMARCD3-201ENST00000262188 ALPPL2P10696 532 aa26.53■■□□□ 1.84
SMARCD3-201ENST00000262188 TGM1P22735 817 aa26.53■■□□□ 1.84
SMARCD3-201ENST00000262188 MPSTP25325 297 aa26.53■■□□□ 1.84
SMARCD3-201ENST00000262188 RNF220Q5VTB9 566 aa26.53■■□□□ 1.84
SMARCD3-201ENST00000262188 Q8N9G6 341 aaPredicted RBP26.53■■□□□ 1.84
SMARCD3-201ENST00000262188 SLC38A3Q99624 504 aa26.53■■□□□ 1.84
SMARCD3-201ENST00000262188 DRC3Q9H069 523 aa26.53■■□□□ 1.84
SMARCD3-201ENST00000262188 DNAJC11Q9NVH1 559 aa26.53■■□□□ 1.84
SMARCD3-201ENST00000262188 ZNF225Q9UK10 706 aa26.53■■□□□ 1.84
SMARCD3-201ENST00000262188 PADI4Q9UM07 663 aa26.53■■□□□ 1.84
SMARCD3-201ENST00000262188 RHPN2P1A8MT19 583 aa26.52■■□□□ 1.84
SMARCD3-201ENST00000262188 SNX3O60493 162 aa26.52■■□□□ 1.84
SMARCD3-201ENST00000262188 SNNO75324 88 aaPredicted RBP26.52■■□□□ 1.84
SMARCD3-201ENST00000262188 KATNA1O75449 491 aa26.52■■□□□ 1.84
SMARCD3-201ENST00000262188 CHRM5P08912 532 aaPredicted RBP26.52■■□□□ 1.84
SMARCD3-201ENST00000262188 NPPBP16860 134 aa26.52■■□□□ 1.84
SMARCD3-201ENST00000262188 ALDH4A1P30038 563 aa26.52■■□□□ 1.84
SMARCD3-201ENST00000262188 SHMT2P34897 504 aa26.52■■□□□ 1.84
SMARCD3-201ENST00000262188 ARL1P40616 181 aaPredicted RBP26.52■■□□□ 1.84
SMARCD3-201ENST00000262188 ASPHQ12797 758 aa26.52■■□□□ 1.84
SMARCD3-201ENST00000262188 LSAMPQ13449 338 aa26.52■■□□□ 1.84
SMARCD3-201ENST00000262188 ARHGAP19Q14CB8 494 aa26.52■■□□□ 1.84
SMARCD3-201ENST00000262188 NKAIN2Q5VXU1 208 aa26.52■■□□□ 1.84
SMARCD3-201ENST00000262188 CAPN13Q6MZZ7 669 aaPredicted RBP26.52■■□□□ 1.84
SMARCD3-201ENST00000262188 GUSBP11Q6P575 273 aa26.52■■□□□ 1.84
SMARCD3-201ENST00000262188 SLC35B4Q969S0 331 aa26.52■■□□□ 1.84
SMARCD3-201ENST00000262188 PPM1MQ96MI6 270 aa26.52■■□□□ 1.84
SMARCD3-201ENST00000262188 DUSP23Q9BVJ7 150 aa26.52■■□□□ 1.84
SMARCD3-201ENST00000262188 CPED1A4D0V7 1026 aa26.51■■□□□ 1.83
SMARCD3-201ENST00000262188 TMEM233B4DJY2 109 aa26.51■■□□□ 1.83
SMARCD3-201ENST00000262188 HSPA4LO95757 839 aa26.51■■□□□ 1.83
SMARCD3-201ENST00000262188 OR1D5P58170 312 aa26.51■■□□□ 1.83
SMARCD3-201ENST00000262188 SH3BP2P78314 561 aa26.51■■□□□ 1.83
SMARCD3-201ENST00000262188 ATG16L1Q676U5 607 aa26.51■■□□□ 1.83
SMARCD3-201ENST00000262188 LRRC70Q7Z2Q7 622 aa26.51■■□□□ 1.83
SMARCD3-201ENST00000262188 RAB42Q8N4Z0 105 aa26.51■■□□□ 1.83
SMARCD3-201ENST00000262188 SMPDL3AQ92484 453 aa26.51■■□□□ 1.83
SMARCD3-201ENST00000262188 KCNA7Q96RP8 456 aa26.51■■□□□ 1.83
SMARCD3-201ENST00000262188 IRF2BPLQ9H1B7 796 aa26.51■■□□□ 1.83
SMARCD3-201ENST00000262188 STN1Q9H668 368 aaKnown RBP26.51■■□□□ 1.83
SMARCD3-201ENST00000262188 KLHL20Q9Y2M5 609 aa26.51■■□□□ 1.83
SMARCD3-201ENST00000262188 FIS1Q9Y3D6 152 aa26.51■■□□□ 1.83
SMARCD3-201ENST00000262188 E7EQ34 232 aa26.51■■□□□ 1.83
SMARCD3-201ENST00000262188 NPHS1O60500 1241 aa26.51■■□□□ 1.83
SMARCD3-201ENST00000262188 GRK2P25098 689 aa26.51■■□□□ 1.83
SMARCD3-201ENST00000262188 PPM1FP49593 454 aaPredicted RBP26.51■■□□□ 1.83
SMARCD3-201ENST00000262188 KPNB1Q14974 876 aaKnown RBP26.51■■□□□ 1.83
SMARCD3-201ENST00000262188 PRAMEF13Q5VWM6 474 aa26.51■■□□□ 1.83
SMARCD3-201ENST00000262188 SYVN1Q86TM6 617 aa26.51■■□□□ 1.83
SMARCD3-201ENST00000262188 LRRC34Q8IZ02 419 aa26.51■■□□□ 1.83
SMARCD3-201ENST00000262188 NEIL2Q969S2 332 aa26.51■■□□□ 1.83
SMARCD3-201ENST00000262188 CNDP1Q96KN2 507 aa26.51■■□□□ 1.83
SMARCD3-201ENST00000262188 MIPEPQ99797 713 aa26.51■■□□□ 1.83
SMARCD3-201ENST00000262188 MARCOQ9UEW3 520 aaPredicted RBP26.51■■□□□ 1.83
SMARCD3-201ENST00000262188 ASCC3Q8N3C0 2202 aaKnown RBP26.51■■□□□ 1.83
SMARCD3-201ENST00000262188 SNRNP200O75643 2136 aaKnown RBP26.5■■□□□ 1.83
SMARCD3-201ENST00000262188 PCM1Q15154 2024 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms