RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 PARP16Q8N5Y8 322 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 OR2T29Q8NH02 315 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 MALT1Q9UDY8 824 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 TRPV2Q9Y5S1 764 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 M0R082 166 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 TPD52L2O43399 206 aaKnown RBP12.61□□□□□ -0.39
SNX1-201ENST00000261889 RFPL2O75678 378 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 RHOCP08134 193 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 MSH3P20585 1137 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 OGNP20774 298 aaKnown RBP12.61□□□□□ -0.39
SNX1-201ENST00000261889 TGFBR2P37173 567 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 TUSC3Q13454 348 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 AGAP7PQ5VUJ5 663 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 GDPD3Q7L5L3 318 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 TAS1R1Q7RTX1 841 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 TRIM48Q8IWZ4 208 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 DPP10Q8N608 796 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 WFDC5Q8TCV5 224 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 APH1BQ8WW43 257 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 NEK6Q9HC98 313 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 PALMDQ9NP74 551 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 TIGARQ9NQ88 270 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 SERHLQ9NQF3 203 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 HEBP1Q9NRV9 189 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 EHD3Q9NZN3 535 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 SLC22A14Q9Y267 594 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 PCM1Q15154 2024 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 HAS3O00219 553 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 DSCR3O14972 297 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 SOX14O95416 240 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 OTCP00480 354 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 PTGER1P34995 402 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 RPS14P62263 151 aaKnown RBP12.61□□□□□ -0.39
SNX1-201ENST00000261889 ZNF33AQ06730 810 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 MAD2L1BPQ15013 274 aaPredicted RBP12.61□□□□□ -0.39
SNX1-201ENST00000261889 ANKS3Q6ZW76 656 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 USP43Q70EL4 1123 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 OR4K1Q8NGD4 311 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 YIPF6Q96EC8 236 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 ELOVL6Q9H5J4 265 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 MRGBPQ9NV56 204 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 ANKMY1Q9P2S6 941 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 CCL27Q9Y4X3 112 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 HOXC8P31273 242 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 SLC26A3P40879 764 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 LEXMQ3ZCV2 418 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 ZNF404Q494X3 552 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 ZNF852Q6ZMS4 543 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 VRK3Q8IV63 474 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 C2orf73Q8N5S3 287 aaPredicted RBP12.61□□□□□ -0.39
SNX1-201ENST00000261889 TEX26Q8N6G2 289 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 LEMD2Q8NC56 503 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 RHOXF1Q8NHV9 184 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 FEVQ99581 238 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 COPS8Q99627 209 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 NUSAP1Q9BXS6 441 aaKnown RBP12.61□□□□□ -0.39
SNX1-201ENST00000261889 KLHL3Q9UH77 587 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 RNF6Q9Y252 685 aa12.61□□□□□ -0.39
SNX1-201ENST00000261889 MANBAO00462 879 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 SLC22A1O15245 554 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 RGS14O43566 566 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 SOX3P41225 446 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 FLT3LGP49771 235 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 CDH12P55289 794 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 CAMK2GQ13555 558 aaPredicted RBP12.6□□□□□ -0.39
SNX1-201ENST00000261889 TRIM60Q495X7 471 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 BCL7AQ4VC05 210 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 SNAP47Q5SQN1 464 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 SERPINA13PQ6UXR4 307 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 OLIG3Q7RTU3 272 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 NIPSNAP1Q9BPW8 284 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 CCM2Q9BSQ5 444 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 TPRKBQ9Y3C4 175 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 STX16O14662 325 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 TPST2O60704 377 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 FKTNO75072 461 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 UPK1BO75841 260 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 WDR47O94967 919 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 C7P10643 843 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 SDC1P18827 310 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 GRK3P35626 688 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 CBX2Q14781 532 aaPredicted RBP12.6□□□□□ -0.39
SNX1-201ENST00000261889 CCSAPQ6IQ19 270 aaPredicted RBP12.6□□□□□ -0.39
SNX1-201ENST00000261889 NRARPQ7Z6K4 114 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 CYP4Z2PQ8N1L4 340 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 CELF5Q8N6W0 485 aaKnown RBP12.6□□□□□ -0.39
SNX1-201ENST00000261889 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.6□□□□□ -0.39
SNX1-201ENST00000261889 PJA1Q8NG27 643 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 CD99L2Q8TCZ2 262 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 OTUB1Q96FW1 271 aaPredicted RBP12.6□□□□□ -0.39
SNX1-201ENST00000261889 YTHDF1Q9BYJ9 559 aaKnown RBP12.6□□□□□ -0.39
SNX1-201ENST00000261889 CTPS2Q9NRF8 586 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 CRLS1Q9UJA2 301 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 PRUNE2Q8WUY3 3088 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 TYW5A2RUC4 315 aaKnown RBP12.6□□□□□ -0.39
SNX1-201ENST00000261889 CLIC1O00299 241 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 FPGTO14772 594 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 PRAMEF4O60810 478 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 LAMP1P11279 417 aa12.6□□□□□ -0.39
SNX1-201ENST00000261889 TTPAP49638 278 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms