RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 CRTAC1Q9NQ79 661 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 DUS2Q9NX74 493 aaKnown RBP15.79■□□□□ 0.12
SREBF1-201ENST00000261646 RPL36Q9Y3U8 105 aaKnown RBP15.79■□□□□ 0.12
SREBF1-201ENST00000261646 PCDHB7Q9Y5E2 793 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 SEMG2Q02383 582 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 CSTF1Q05048 431 aaKnown RBP15.79■□□□□ 0.12
SREBF1-201ENST00000261646 SNAP47Q5SQN1 464 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 AGAP7PQ5VUJ5 663 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 TMPRSS11BQ86T26 416 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 L3HYPDHQ96EM0 354 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 MYO19Q96H55 970 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 ZNF607Q96SK3 696 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 PKP4Q99569 1192 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 COQ3Q9NZJ6 369 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 PCDH10Q9P2E7 1040 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 TBL1XO60907 577 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 PRDX3P30048 256 aaKnown RBP15.79■□□□□ 0.12
SREBF1-201ENST00000261646 IDUAP35475 653 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 OR1E2P47887 323 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 TUSC3Q13454 348 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 NDUFAF6Q330K2 333 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 TRAPPC5Q8IUR0 188 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 TSPAN18Q96SJ8 248 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 GULP1Q9UBP9 304 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 NUFIP1Q9UHK0 495 aaKnown RBP15.79■□□□□ 0.12
SREBF1-201ENST00000261646 A0A1W2PRG6 482 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 NME6O75414 186 aaPredicted RBP15.79■□□□□ 0.12
SREBF1-201ENST00000261646 PTX3P26022 381 aaPredicted RBP15.79■□□□□ 0.12
SREBF1-201ENST00000261646 RPL3P39023 403 aaKnown RBP15.79■□□□□ 0.12
SREBF1-201ENST00000261646 FAM189BP81408 668 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 TARDBPQ13148 414 aaKnown RBP eCLIP15.79■□□□□ 0.121e-6■■■■□ 20.5
SREBF1-201ENST00000261646 PNCKQ6P2M8 343 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 CXXC5Q7LFL8 322 aaKnown RBP15.79■□□□□ 0.12
SREBF1-201ENST00000261646 PRSS48Q7RTY5 328 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 VTCN1Q7Z7D3 282 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 GINS4Q9BRT9 223 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 ZDHHC6Q9H6R6 413 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 DNAJC27Q9NZQ0 273 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 VAPAQ9P0L0 249 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 PCDHB14Q9Y5E9 798 aa15.79■□□□□ 0.12
SREBF1-201ENST00000261646 A0A0G2JLL6 359 aaPredicted RBP15.78■□□□□ 0.12
SREBF1-201ENST00000261646 ADAM23O75077 832 aa15.78■□□□□ 0.12
SREBF1-201ENST00000261646 SOX14O95416 240 aa15.78■□□□□ 0.12
SREBF1-201ENST00000261646 KDELR2P33947 212 aa15.78■□□□□ 0.12
SREBF1-201ENST00000261646 DPY19L1Q2PZI1 675 aa15.78■□□□□ 0.12
SREBF1-201ENST00000261646 RANBP10Q6VN20 620 aa15.78■□□□□ 0.12
SREBF1-201ENST00000261646 SPRED1Q7Z699 444 aa15.78■□□□□ 0.12
SREBF1-201ENST00000261646 PRRT2Q7Z6L0 340 aaPredicted RBP15.78■□□□□ 0.12
SREBF1-201ENST00000261646 OR1I1O60431 355 aa15.78■□□□□ 0.12
SREBF1-201ENST00000261646 MAFKO60675 156 aa15.78■□□□□ 0.12
SREBF1-201ENST00000261646 CLDN11O75508 207 aa15.78■□□□□ 0.12
SREBF1-201ENST00000261646 FGF4P08620 206 aa15.78■□□□□ 0.12
SREBF1-201ENST00000261646 MRPS6P82932 125 aaKnown RBP15.78■□□□□ 0.12
SREBF1-201ENST00000261646 RCAN2Q14206 197 aa15.78■□□□□ 0.12
SREBF1-201ENST00000261646 GPAT3Q53EU6 434 aa15.78■□□□□ 0.12
SREBF1-201ENST00000261646 KANK2Q63ZY3 851 aa15.78■□□□□ 0.12
SREBF1-201ENST00000261646 DPY19L3Q6ZPD9 716 aa15.78■□□□□ 0.12
SREBF1-201ENST00000261646 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.78■□□□□ 0.12
SREBF1-201ENST00000261646 RAVER1Q8IY67 606 aaKnown RBP15.78■□□□□ 0.12
SREBF1-201ENST00000261646 RGL4Q8IZJ4 473 aa15.78■□□□□ 0.12
SREBF1-201ENST00000261646 MRPS31Q92665 395 aaKnown RBP15.78■□□□□ 0.12
SREBF1-201ENST00000261646 CHIAQ9BZP6 476 aa15.78■□□□□ 0.12
SREBF1-201ENST00000261646 FLRT1Q9NZU1 646 aa15.78■□□□□ 0.12
SREBF1-201ENST00000261646 UBE2QL1A1L167 161 aa15.78■□□□□ 0.12
SREBF1-201ENST00000261646 AGAP5A6NIR3 686 aa15.78■□□□□ 0.12
SREBF1-201ENST00000261646 ERAL1O75616 437 aaKnown RBP15.78■□□□□ 0.12
SREBF1-201ENST00000261646 ALPLP05186 524 aa15.78■□□□□ 0.12
SREBF1-201ENST00000261646 CENPAP49450 140 aa15.78■□□□□ 0.12
SREBF1-201ENST00000261646 ABRAXAS2Q15018 415 aa15.78■□□□□ 0.12
SREBF1-201ENST00000261646 SMN1Q16637 294 aaKnown RBP15.78■□□□□ 0.12
SREBF1-201ENST00000261646 TSPYL5Q86VY4 417 aaPredicted RBP15.78■□□□□ 0.12
SREBF1-201ENST00000261646 C10orf53Q8N6V4 93 aa15.78■□□□□ 0.12
SREBF1-201ENST00000261646 RAET1EQ8TD07 263 aa15.78■□□□□ 0.12
SREBF1-201ENST00000261646 KAT2AQ92830 837 aa15.78■□□□□ 0.12
SREBF1-201ENST00000261646 SLC25A13Q9UJS0 675 aa15.78■□□□□ 0.12
SREBF1-201ENST00000261646 RUVBL1Q9Y265 456 aaKnown RBP15.78■□□□□ 0.12
SREBF1-201ENST00000261646 GRIP1Q9Y3R0 1128 aa15.78■□□□□ 0.12
SREBF1-201ENST00000261646 FZD9O00144 591 aa15.77■□□□□ 0.12
SREBF1-201ENST00000261646 MANBAO00462 879 aa15.77■□□□□ 0.12
SREBF1-201ENST00000261646 DLGAP1O14490 977 aa15.77■□□□□ 0.12
SREBF1-201ENST00000261646 SLC9A3P48764 834 aa15.77■□□□□ 0.12
SREBF1-201ENST00000261646 HNRNPA0Q13151 305 aaKnown RBP15.77■□□□□ 0.12
SREBF1-201ENST00000261646 IDNKQ5T6J7 187 aa15.77■□□□□ 0.12
SREBF1-201ENST00000261646 LYPLAL1Q5VWZ2 237 aa15.77■□□□□ 0.12
SREBF1-201ENST00000261646 ATG9BQ674R7 924 aa15.77■□□□□ 0.12
SREBF1-201ENST00000261646 FUNDC1Q8IVP5 155 aa15.77■□□□□ 0.12
SREBF1-201ENST00000261646 KRT78Q8N1N4 520 aa15.77■□□□□ 0.12
SREBF1-201ENST00000261646 GHDCQ8N2G8 530 aa15.77■□□□□ 0.12
SREBF1-201ENST00000261646 SLC2A13Q96QE2 648 aa15.77■□□□□ 0.12
SREBF1-201ENST00000261646 NFKBIZQ9BYH8 718 aa15.77■□□□□ 0.12
SREBF1-201ENST00000261646 MAGEH1Q9H213 219 aa15.77■□□□□ 0.12
SREBF1-201ENST00000261646 GPR83Q9NYM4 423 aa15.77■□□□□ 0.12
SREBF1-201ENST00000261646 RDH8Q9NYR8 311 aa15.77■□□□□ 0.12
SREBF1-201ENST00000261646 CD300AQ9UGN4 299 aa15.77■□□□□ 0.12
SREBF1-201ENST00000261646 PFDN2Q9UHV9 154 aa15.77■□□□□ 0.12
SREBF1-201ENST00000261646 BOLA1Q9Y3E2 137 aa15.77■□□□□ 0.12
SREBF1-201ENST00000261646 TMEM221A6NGB7 291 aa15.77■□□□□ 0.12
SREBF1-201ENST00000261646 RPS24P62847 133 aaKnown RBP15.77■□□□□ 0.12
SREBF1-201ENST00000261646 CYP27C1Q4G0S4 372 aa15.77■□□□□ 0.12
SREBF1-201ENST00000261646 RFTN2Q52LD8 501 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms