RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 PSMD14O00487 310 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 WDR46O15213 610 aaKnown RBP3.99□□□□□ -1.77
CCDC54-201ENST00000261058 DFFBO76075 338 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 MT-ND3P03897 115 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 GPIP06744 558 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 FAM58BPP0C7Q3 252 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 PATE4P0C8F1 98 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 PDGFRAP16234 1089 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 GLIPR1P48060 266 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 HERV-K104P61576 105 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 HERC3Q15034 1050 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 PTGISQ16647 500 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 LACTB2Q53H82 288 aaPredicted RBP3.99□□□□□ -1.77
CCDC54-201ENST00000261058 MPP7Q5T2T1 576 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 FAM91A1Q658Y4 838 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 FAM53AQ6NSI3 398 aaPredicted RBP3.99□□□□□ -1.77
CCDC54-201ENST00000261058 MOXD1Q6UVY6 613 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 ENPP7Q6UWV6 458 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 USP43Q70EL4 1123 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 MCM10Q7L590 875 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 ANKRD33Q7Z3H0 272 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 UNC45BQ8IWX7 931 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 MARVELD2Q8N4S9 558 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 HPSE2Q8WWQ2 592 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 DNASE2BQ8WZ79 361 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 RAD54LQ92698 747 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 PROX1Q92786 737 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 CORO2AQ92828 525 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 GBP5Q96PP8 586 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 EPYCQ99645 322 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 LMAN1LQ9HAT1 526 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 COMMD8Q9NX08 183 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 TXNDC16Q9P2K2 825 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 RASAL2Q9UJF2 1139 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 MTF2Q9Y483 593 aaPredicted RBP3.99□□□□□ -1.77
CCDC54-201ENST00000261058 ABCC9O60706 1549 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 DISP3Q9P2K9 1392 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 TRAV34A0A0B4J273 112 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 VGLL3A8MV65 326 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 MPHOSPH10O00566 681 aaKnown RBP3.98□□□□□ -1.77
CCDC54-201ENST00000261058 NDC80O14777 642 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 GSRP00390 522 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 NGFP01138 241 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 EDN1P05305 212 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 CD48P09326 243 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 CCDC159P0C7I6 412 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 CASTP20810 708 aaKnown RBP3.98□□□□□ -1.77
CCDC54-201ENST00000261058 CDH3P22223 829 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 CD27P26842 260 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 KRT2P35908 639 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 HSD17B3P37058 310 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 WNT5AP41221 380 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 HNF4AP41235 474 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 CD86P42081 329 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 RGS7P49802 495 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 BMXP51813 675 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 CAPZA1P52907 286 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 MFAP3P55082 362 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 EVCP57679 992 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 UBXN1Q04323 297 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 PHKG1Q16816 387 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 CDO1Q16878 200 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 TWISTNBQ3B726 338 aaPredicted RBP3.98□□□□□ -1.77
CCDC54-201ENST00000261058 LBHQ53QV2 105 aaPredicted RBP3.98□□□□□ -1.77
CCDC54-201ENST00000261058 ZRANB3Q5FWF4 1079 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 SLC35D3Q5M8T2 416 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 PET117Q6UWS5 81 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 SLC16A9Q7RTY1 509 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 NLRP14Q86W24 1093 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 EID3Q8N140 333 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 OR8H3Q8N146 312 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 RYBPQ8N488 228 aaPredicted RBP3.98□□□□□ -1.77
CCDC54-201ENST00000261058 NAT8LQ8N9F0 302 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 GRAPLQ8TC17 118 aaPredicted RBP3.98□□□□□ -1.77
CCDC54-201ENST00000261058 NSMAFQ92636 917 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 MR1Q95460 341 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 GIMAP5Q96F15 307 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 THOC1Q96FV9 657 aaKnown RBP3.98□□□□□ -1.77
CCDC54-201ENST00000261058 NSL1Q96IY1 281 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 INTS14Q96SY0 518 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 MAP3K3Q99759 626 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 FERMT1Q9BQL6 677 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 DESI2Q9BSY9 194 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 INPP5KQ9BT40 448 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 CCDC94Q9BW85 323 aaPredicted RBP3.98□□□□□ -1.77
CCDC54-201ENST00000261058 GRPEL1Q9HAV7 217 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 SLC52A3Q9NQ40 469 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 ZNF71Q9NQZ8 489 aaPredicted RBP3.98□□□□□ -1.77
CCDC54-201ENST00000261058 HPF1Q9NWY4 346 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 P4HTMQ9NXG6 502 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 GTF3C4Q9UKN8 822 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 KCNJ14Q9UNX9 436 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 RRP15Q9Y3B9 282 aaKnown RBP3.98□□□□□ -1.77
CCDC54-201ENST00000261058 ZCCHC6Q5VYS8 1495 aaKnown RBP3.98□□□□□ -1.77
CCDC54-201ENST00000261058 ATAD2BQ9ULI0 1458 aa3.98□□□□□ -1.77
CCDC54-201ENST00000261058 SYNJ2BP-COX16A0A087WUM0 186 aa3.97□□□□□ -1.77
CCDC54-201ENST00000261058 A0A0G2JLW4 131 aa3.97□□□□□ -1.77
CCDC54-201ENST00000261058 TMEM110-MUSTN1A8MSY1 372 aa3.97□□□□□ -1.77
CCDC54-201ENST00000261058 FAM86B1E9PN63 330 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms