RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 TYROBPO43914 113 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 SLC16A8O95907 504 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 EBLN1P0CF75 366 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 PVRP15151 417 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 CYP2A7P20853 494 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 EIF2S3P41091 472 aaKnown RBP16.16■□□□□ 0.18
SDCBP-201ENST00000260130 RASSF2P50749 326 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 ACY1Q03154 408 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 TRIM73Q86UV7 250 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 C4orf33Q8N1A6 199 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 MRRFQ96E11 262 aaKnown RBP16.16■□□□□ 0.18
SDCBP-201ENST00000260130 KLHL25Q9H0H3 589 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 PDE7BQ9NP56 450 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 BATF3Q9NR55 127 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 PDE10AQ9Y233 779 aa16.16■□□□□ 0.18
SDCBP-201ENST00000260130 APC2O95996 2303 aa16.15■□□□□ 0.18
SDCBP-201ENST00000260130 ZNF839A8K0R7 811 aa16.15■□□□□ 0.18
SDCBP-201ENST00000260130 A8MUI8 341 aa16.15■□□□□ 0.18
SDCBP-201ENST00000260130 STMN1P16949 149 aa16.15■□□□□ 0.18
SDCBP-201ENST00000260130 PNLIPRP1P54315 467 aa16.15■□□□□ 0.18
SDCBP-201ENST00000260130 FASTKQ14296 549 aaKnown RBP16.15■□□□□ 0.18
SDCBP-201ENST00000260130 SF1Q15637 639 aaKnown RBP16.15■□□□□ 0.18
SDCBP-201ENST00000260130 TMEM237Q96Q45 408 aa16.15■□□□□ 0.18
SDCBP-201ENST00000260130 FGF21Q9NSA1 209 aa16.15■□□□□ 0.18
SDCBP-201ENST00000260130 RRP8O43159 456 aaKnown RBP16.14■□□□□ 0.17
SDCBP-201ENST00000260130 CD82P27701 267 aa16.14■□□□□ 0.17
SDCBP-201ENST00000260130 TUBB3Q13509 450 aa16.14■□□□□ 0.17
SDCBP-201ENST00000260130 ZNF480Q8WV37 535 aa16.14■□□□□ 0.17
SDCBP-201ENST00000260130 ANKRD49Q8WVL7 239 aa16.14■□□□□ 0.17
SDCBP-201ENST00000260130 ANKRD27Q96NW4 1050 aa16.14■□□□□ 0.17
SDCBP-201ENST00000260130 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.14■□□□□ 0.17
SDCBP-201ENST00000260130 A0A1W2PPV9 198 aa16.14■□□□□ 0.17
SDCBP-201ENST00000260130 HIST1H2AGP0C0S8 130 aaPredicted RBP16.14■□□□□ 0.17
SDCBP-201ENST00000260130 FGF5P12034 268 aa16.14■□□□□ 0.17
SDCBP-201ENST00000260130 HIST1H2ADP20671 130 aa16.14■□□□□ 0.17
SDCBP-201ENST00000260130 RAB10P61026 200 aa16.14■□□□□ 0.17
SDCBP-201ENST00000260130 BPHLQ86WA6 291 aaPredicted RBP16.14■□□□□ 0.17
SDCBP-201ENST00000260130 PPP1R3BQ86XI6 285 aa16.14■□□□□ 0.17
SDCBP-201ENST00000260130 FAM20CQ8IXL6 584 aa16.14■□□□□ 0.17
SDCBP-201ENST00000260130 C19orf47Q8N9M1 422 aaKnown RBP16.14■□□□□ 0.17
SDCBP-201ENST00000260130 SMPDL3AQ92484 453 aa16.14■□□□□ 0.17
SDCBP-201ENST00000260130 THOC1Q96FV9 657 aaKnown RBP16.14■□□□□ 0.17
SDCBP-201ENST00000260130 TCTN2Q96GX1 697 aa16.14■□□□□ 0.17
SDCBP-201ENST00000260130 HIST1H2AHQ96KK5 128 aa16.14■□□□□ 0.17
SDCBP-201ENST00000260130 CCDC138Q96M89 665 aa16.14■□□□□ 0.17
SDCBP-201ENST00000260130 DCBLD2Q96PD2 775 aa16.14■□□□□ 0.17
SDCBP-201ENST00000260130 HIST1H2AJQ99878 128 aa16.14■□□□□ 0.17
SDCBP-201ENST00000260130 H2AFJQ9BTM1 129 aa16.14■□□□□ 0.17
SDCBP-201ENST00000260130 SLCO1B3Q9NPD5 702 aa16.14■□□□□ 0.17
SDCBP-201ENST00000260130 RARRES3Q9UL19 164 aa16.14■□□□□ 0.17
SDCBP-201ENST00000260130 ZZEF1O43149 2961 aa16.13■□□□□ 0.17
SDCBP-201ENST00000260130 ZFHX4Q86UP3 3567 aa16.13■□□□□ 0.17
SDCBP-201ENST00000260130 E7ENX8 843 aa16.13■□□□□ 0.17
SDCBP-201ENST00000260130 PHGDHO43175 533 aaKnown RBP16.13■□□□□ 0.17
SDCBP-201ENST00000260130 FKBP9O95302 570 aa16.13■□□□□ 0.17
SDCBP-201ENST00000260130 WISP3O95389 354 aaPredicted RBP16.13■□□□□ 0.17
SDCBP-201ENST00000260130 TAP2Q03519 686 aa16.13■□□□□ 0.17
SDCBP-201ENST00000260130 PHKG1Q16816 387 aa16.13■□□□□ 0.17
SDCBP-201ENST00000260130 SUSD1Q6UWL2 747 aa16.13■□□□□ 0.17
SDCBP-201ENST00000260130 ZFAND4Q86XD8 727 aa16.13■□□□□ 0.17
SDCBP-201ENST00000260130 SYTL1Q8IYJ3 562 aa16.13■□□□□ 0.17
SDCBP-201ENST00000260130 OR2A1Q8NGT9 310 aa16.13■□□□□ 0.17
SDCBP-201ENST00000260130 C10orf82Q8WW14 230 aa16.13■□□□□ 0.17
SDCBP-201ENST00000260130 KCNE4Q8WWG9 221 aa16.13■□□□□ 0.17
SDCBP-201ENST00000260130 ALKBH8Q96BT7 664 aaKnown RBP16.13■□□□□ 0.17
SDCBP-201ENST00000260130 MIEF2Q96C03 454 aa16.13■□□□□ 0.17
SDCBP-201ENST00000260130 NAF1Q96HR8 494 aaKnown RBP16.13■□□□□ 0.17
SDCBP-201ENST00000260130 TRIM54Q9BYV2 358 aa16.13■□□□□ 0.17
SDCBP-201ENST00000260130 CHRNA10Q9GZZ6 450 aa16.13■□□□□ 0.17
SDCBP-201ENST00000260130 GRID1Q9ULK0 1009 aa16.13■□□□□ 0.17
SDCBP-201ENST00000260130 MAP1BP46821 2468 aaKnown RBP16.13■□□□□ 0.17
SDCBP-201ENST00000260130 ACACAQ13085 2346 aa16.13■□□□□ 0.17
SDCBP-201ENST00000260130 A0A1W2PPM1 405 aa16.13■□□□□ 0.17
SDCBP-201ENST00000260130 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.13■□□□□ 0.17
SDCBP-201ENST00000260130 DIAPH2O60879 1101 aa16.13■□□□□ 0.17
SDCBP-201ENST00000260130 KRT4P19013 534 aa16.13■□□□□ 0.17
SDCBP-201ENST00000260130 CCNG1P51959 295 aa16.13■□□□□ 0.17
SDCBP-201ENST00000260130 NAA25Q14CX7 972 aa16.13■□□□□ 0.17
SDCBP-201ENST00000260130 GPR19Q15760 415 aa16.13■□□□□ 0.17
SDCBP-201ENST00000260130 ZIC1Q15915 447 aa16.13■□□□□ 0.17
SDCBP-201ENST00000260130 ADGRD1Q6QNK2 874 aa16.13■□□□□ 0.17
SDCBP-201ENST00000260130 PPFIBP2Q8ND30 876 aa16.13■□□□□ 0.17
SDCBP-201ENST00000260130 ZNF75CPQ92670 426 aaPredicted RBP16.13■□□□□ 0.17
SDCBP-201ENST00000260130 ZNF501Q96CX3 271 aaPredicted RBP16.13■□□□□ 0.17
SDCBP-201ENST00000260130 DPH1Q9BZG8 443 aa16.13■□□□□ 0.17
SDCBP-201ENST00000260130 FAM60AQ9NP50 221 aa16.13■□□□□ 0.17
SDCBP-201ENST00000260130 A0A087WV48 116 aa16.12■□□□□ 0.17
SDCBP-201ENST00000260130 PABPN1LA6NDY0 278 aaKnown RBP16.12■□□□□ 0.17
SDCBP-201ENST00000260130 STMND1H3BQB6 276 aa16.12■□□□□ 0.17
SDCBP-201ENST00000260130 TM9SF1O15321 606 aa16.12■□□□□ 0.17
SDCBP-201ENST00000260130 HNRNPCL1O60812 293 aaKnown RBP16.12■□□□□ 0.17
SDCBP-201ENST00000260130 ENO2P09104 434 aaPredicted RBP16.12■□□□□ 0.17
SDCBP-201ENST00000260130 MSL3P1P0C860 447 aa16.12■□□□□ 0.17
SDCBP-201ENST00000260130 TROVE2P10155 538 aaKnown RBP eCLIP16.12■□□□□ 0.17
SDCBP-201ENST00000260130 MAGP20916 626 aa16.12■□□□□ 0.17
SDCBP-201ENST00000260130 PSMB5P28074 263 aa16.12■□□□□ 0.17
SDCBP-201ENST00000260130 IMPA1P29218 277 aa16.12■□□□□ 0.17
SDCBP-201ENST00000260130 TSTA3Q13630 321 aaPredicted RBP16.12■□□□□ 0.17
SDCBP-201ENST00000260130 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.12■□□□□ 0.17
SDCBP-201ENST00000260130 MROH9Q5TGP6 573 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms