RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 KCTD5Q9NXV2 234 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 TAS2R16Q9NYV7 291 aa13.11□□□□□ -0.31
VHL-201ENST00000256474 TMEFF2Q9UIK5 374 aaPredicted RBP13.11□□□□□ -0.31
VHL-201ENST00000256474 INTS6Q9UL03 887 aaKnown RBP13.11□□□□□ -0.31
VHL-201ENST00000256474 A0A1W2PQ45 241 aaPredicted RBP13.1□□□□□ -0.31
VHL-201ENST00000256474 A0A1W2PQY0 241 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 A0A1W2PRU2 124 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 KPNA5O15131 536 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 ADAM23O75077 832 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 CYP7B1O75881 506 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 NPPAP01160 153 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 HMGA1P17096 107 aaKnown RBP13.1□□□□□ -0.31
VHL-201ENST00000256474 CLK3P49761 638 aaKnown RBP13.1□□□□□ -0.31
VHL-201ENST00000256474 CDH12P55289 794 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 RPS3AP61247 264 aaKnown RBP13.1□□□□□ -0.31
VHL-201ENST00000256474 CCSMST1Q4G0I0 132 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 DHRS4L2Q6PKH6 230 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 CRTC1Q6UUV9 634 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 HMGN2P46Q86SG4 172 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 C1orf52Q8N6N3 182 aaKnown RBP13.1□□□□□ -0.31
VHL-201ENST00000256474 POC5Q8NA72 575 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 SPATA17Q96L03 361 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 CHCHD6Q9BRQ6 235 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 C1QTNF3Q9BXJ4 246 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 YTHDF1Q9BYJ9 559 aaKnown RBP13.1□□□□□ -0.31
VHL-201ENST00000256474 THG1LQ9NWX6 298 aaKnown RBP13.1□□□□□ -0.31
VHL-201ENST00000256474 MAP4K5Q9Y4K4 846 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 KNL1Q8NG31 2342 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 ZNF701M0R085 212 aaPredicted RBP13.1□□□□□ -0.31
VHL-201ENST00000256474 ERN1O75460 977 aaKnown RBP13.1□□□□□ -0.31
VHL-201ENST00000256474 RPP38P78345 283 aaKnown RBP13.1□□□□□ -0.31
VHL-201ENST00000256474 CLCA4Q14CN2 919 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 KIAA0040Q15053 153 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 ZNF691Q5VV52 312 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 FRG2Q64ET8 278 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 Q6ZVL8 140 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 ALDH16A1Q8IZ83 802 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 AADATQ8N5Z0 425 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 CHST14Q8NCH0 376 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 CD99L2Q8TCZ2 262 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 FRG2BQ96QU4 278 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 CLSTN3Q9BQT9 956 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 LSM7Q9UK45 103 aaKnown RBP13.1□□□□□ -0.31
VHL-201ENST00000256474 SAMD4AQ9UPU9 718 aaKnown RBP13.1□□□□□ -0.31
VHL-201ENST00000256474 CAB39Q9Y376 341 aaPredicted RBP13.1□□□□□ -0.31
VHL-201ENST00000256474 CCL27Q9Y4X3 112 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 DOCK4Q8N1I0 1966 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 GAPDHSO14556 408 aaPredicted RBP13.1□□□□□ -0.31
VHL-201ENST00000256474 SELPP16109 830 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 BDKRB1P46663 353 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 PRIM2P49643 509 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 TPTEP56180 551 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 MVKQ03426 396 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 ELAVL2Q12926 359 aaKnown RBP13.1□□□□□ -0.31
VHL-201ENST00000256474 MRPL58Q14197 206 aaKnown RBP13.1□□□□□ -0.31
VHL-201ENST00000256474 TCTN1Q2MV58 587 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 GPRC6AQ5T6X5 926 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 SLC16A12Q6ZSM3 486 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 GPR149Q86SP6 731 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 SETD9Q8NE22 299 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 TRUB1Q8WWH5 349 aaKnown RBP13.1□□□□□ -0.31
VHL-201ENST00000256474 FATE1Q969F0 183 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 PLD4Q96BZ4 506 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 CPPED1Q9BRF8 314 aaPredicted RBP13.1□□□□□ -0.31
VHL-201ENST00000256474 SGK2Q9HBY8 427 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 USE1Q9NZ43 259 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 IL37Q9NZH6 218 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 ENPP5Q9UJA9 477 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 FZD4Q9ULV1 537 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 BTBD3Q9Y2F9 522 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 NEUROG3Q9Y4Z2 214 aa13.1□□□□□ -0.31
VHL-201ENST00000256474 SPTBN5Q9NRC6 3674 aaKnown RBP13.09□□□□□ -0.31
VHL-201ENST00000256474 TMEM202A6NGA9 273 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 EFCAB9A8MZ26 197 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 RGS5O15539 181 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 AOC2O75106 756 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 ZDHHC11BP0C7U3 371 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 KDELR2P33947 212 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 NSG1P42857 185 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 SERPINB10P48595 397 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 GTF2IRD2BQ6EKJ0 949 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 TMPRSS11BQ86T26 416 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 GTF2IRD2Q86UP8 949 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 HEATR4Q86WZ0 1026 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 NPAS4Q8IUM7 802 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 NINQ8N4C6 2090 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 GLB1L3Q8NCI6 653 aaPredicted RBP13.09□□□□□ -0.31
VHL-201ENST00000256474 CDK5RAP1Q96SZ6 601 aaKnown RBP13.09□□□□□ -0.31
VHL-201ENST00000256474 TUBA1CQ9BQE3 449 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 ZNF334Q9HCZ1 680 aaPredicted RBP13.09□□□□□ -0.31
VHL-201ENST00000256474 IMPAD1Q9NX62 359 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 ZNF639Q9UID6 485 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 RIMKLBQ9ULI2 386 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 TRIM64CA6NLI5 447 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 INPPL1O15357 1258 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 ANXA4P09525 319 aaPredicted RBP13.09□□□□□ -0.31
VHL-201ENST00000256474 SPIBQ01892 262 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 DPY19L3Q6ZPD9 716 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 STX19Q8N4C7 294 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 COPS4Q9BT78 406 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms