RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 PTRHD1Q6GMV3 140 aaKnown RBP18.4■□□□□ 0.54
SNX4-201ENST00000251775 TUBA1AQ71U36 451 aa18.4■□□□□ 0.54
SNX4-201ENST00000251775 HJURPQ8NCD3 748 aaPredicted RBP18.4■□□□□ 0.54
SNX4-201ENST00000251775 C6orf62Q9GZU0 229 aaPredicted RBP18.4■□□□□ 0.54
SNX4-201ENST00000251775 ZNF334Q9HCZ1 680 aaPredicted RBP18.4■□□□□ 0.54
SNX4-201ENST00000251775 CREBZFQ9NS37 354 aa18.4■□□□□ 0.54
SNX4-201ENST00000251775 GFRA2O00451 464 aa18.4■□□□□ 0.54
SNX4-201ENST00000251775 KRT75O95678 551 aa18.4■□□□□ 0.54
SNX4-201ENST00000251775 S100BP04271 92 aaPredicted RBP18.4■□□□□ 0.54
SNX4-201ENST00000251775 SLC2A4P14672 509 aa18.4■□□□□ 0.54
SNX4-201ENST00000251775 MAGEA2P43356 314 aa18.4■□□□□ 0.54
SNX4-201ENST00000251775 CDH18Q13634 790 aa18.4■□□□□ 0.54
SNX4-201ENST00000251775 GTF2H2Q13888 395 aa18.4■□□□□ 0.54
SNX4-201ENST00000251775 VEPH1Q14D04 833 aa18.4■□□□□ 0.54
SNX4-201ENST00000251775 TPGS2Q68CL5 300 aa18.4■□□□□ 0.54
SNX4-201ENST00000251775 GTF2H2CQ6P1K8 395 aa18.4■□□□□ 0.54
SNX4-201ENST00000251775 CCBE1Q6UXH8 406 aaPredicted RBP18.4■□□□□ 0.54
SNX4-201ENST00000251775 PLPP6Q8IY26 295 aa18.4■□□□□ 0.54
SNX4-201ENST00000251775 METTL4Q8N3J2 472 aa18.4■□□□□ 0.54
SNX4-201ENST00000251775 CLDN19Q8N6F1 224 aa18.4■□□□□ 0.54
SNX4-201ENST00000251775 ARL14EPQ8N8R7 260 aaPredicted RBP18.4■□□□□ 0.54
SNX4-201ENST00000251775 SLC38A4Q969I6 547 aa18.4■□□□□ 0.54
SNX4-201ENST00000251775 UBE2FQ969M7 185 aa18.4■□□□□ 0.54
SNX4-201ENST00000251775 ZBTB18Q99592 522 aa18.4■□□□□ 0.54
SNX4-201ENST00000251775 SH3GL1Q99961 368 aa18.4■□□□□ 0.54
SNX4-201ENST00000251775 NSUN3Q9H649 340 aaKnown RBP18.4■□□□□ 0.54
SNX4-201ENST00000251775 NDRG4Q9ULP0 352 aaKnown RBP18.4■□□□□ 0.54
SNX4-201ENST00000251775 MN1Q10571 1320 aaPredicted RBP18.39■□□□□ 0.53
SNX4-201ENST00000251775 TRBV5-3A0A0A0MS03 114 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 FFAR2O15552 330 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 MRPS14O60783 128 aaKnown RBP18.39■□□□□ 0.53
SNX4-201ENST00000251775 RECQL5O94762 991 aaPredicted RBP18.39■□□□□ 0.53
SNX4-201ENST00000251775 SOD2P04179 222 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 UBE2UQ5VVX9 321 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 CERS6Q6ZMG9 384 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 USP43Q70EL4 1123 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 ADAMTSL2Q86TH1 951 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 CALHM3Q86XJ0 350 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 CCDC71Q8IV32 467 aaPredicted RBP18.39■□□□□ 0.53
SNX4-201ENST00000251775 ZDHHC21Q8IVQ6 265 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 DCAF4L2Q8NA75 395 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 APOL4Q9BPW4 351 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 CLPBQ9H078 707 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 ASB8Q9H765 288 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 PRDM8Q9NQV8 689 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 ELOVL2Q9NXB9 296 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 FAM220BPB1ANY3 271 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 TAPBPO15533 448 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 AIREO43918 545 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 GUCA1CO95843 209 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 PGRP06401 933 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 ZNF7P17097 686 aaPredicted RBP18.39■□□□□ 0.53
SNX4-201ENST00000251775 EFNA1P20827 205 aaPredicted RBP18.39■□□□□ 0.53
SNX4-201ENST00000251775 HOXA9P31269 272 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 GGT5P36269 586 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 TRPC1P48995 793 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 GZMMP51124 257 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 AP1S1P61966 158 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 TXNDC8Q6A555 127 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 PNCKQ6P2M8 343 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 AHSA2Q719I0 299 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 GDPD3Q7L5L3 318 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 TTC29Q8NA56 475 aaPredicted RBP18.39■□□□□ 0.53
SNX4-201ENST00000251775 MYOCQ99972 504 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 ITPAQ9BY32 194 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 ZFYVE1Q9HBF4 777 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 ITM2CQ9NQX7 267 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 ABCG2Q9UNQ0 655 aa18.39■□□□□ 0.53
SNX4-201ENST00000251775 TNPO3Q9Y5L0 923 aaKnown RBP18.39■□□□□ 0.53
SNX4-201ENST00000251775 ZNF106Q9H2Y7 1883 aaKnown RBP18.38■□□□□ 0.53
SNX4-201ENST00000251775 COL4A6Q14031 1691 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 PRRG1O14668 218 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 CXCL10P02778 98 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 HSPA7P48741 367 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 NEK2P51955 445 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 PRSS36Q5K4E3 855 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 TPRG1LQ5T0D9 272 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 RSBN1Q5VWQ0 802 aaPredicted RBP18.38■□□□□ 0.53
SNX4-201ENST00000251775 Q6ZNB5 142 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 CCDC103Q8IW40 242 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 ELMOD1Q8N336 334 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 PARP16Q8N5Y8 322 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 KRTCAP2Q8N6L1 136 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 CELF2-AS1Q8N7Q2 184 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 IPPKQ9H8X2 491 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 IL26Q9NPH9 171 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 RASSF1Q9NS23 344 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 C1orf109Q9NX04 203 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 CAB39Q9Y376 341 aaPredicted RBP18.38■□□□□ 0.53
SNX4-201ENST00000251775 HAT1O14929 419 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 DSCR3O14972 297 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 GUCY1B2O75343 617 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 WBP4O75554 376 aaKnown RBP18.38■□□□□ 0.53
SNX4-201ENST00000251775 CLDN7O95471 211 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 LATS1O95835 1130 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 RPS3P23396 243 aaKnown RBP eCLIP18.38■□□□□ 0.53
SNX4-201ENST00000251775 PPP3CCP48454 512 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 ATG9BQ674R7 924 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 SPATC1Q76KD6 591 aa18.38■□□□□ 0.53
SNX4-201ENST00000251775 SNX20Q7Z614 316 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms