RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 ACTRT2Q8TDY3 377 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 C10orf82Q8WW14 230 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 USP7Q93009 1102 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 NEIL2Q969S2 332 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 MOCOSQ96EN8 888 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 IL17FQ96PD4 163 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 LRFN3Q9BTN0 628 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 KCNK13Q9HB14 408 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 TMEM184CQ9NVA4 438 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 DNAAF2Q9NVR5 837 aaKnown RBP12.48□□□□□ -0.41
LSM8-201ENST00000249299 EPHA6Q9UF33 1036 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 SNX7Q9UNH6 387 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 KNL1Q8NG31 2342 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 CACNA1HO95180 2353 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 ZNF318Q5VUA4 2279 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 KCNE1BA0A087WTH5 132 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 KRT87PA6NCN2 255 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 TNFSF14O43557 240 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 ULK1O75385 1050 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 OR4F21O95013 312 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 CAPN1P07384 714 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 ZNF806P0C7X5 589 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 KITP10721 976 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 TSPAN8P19075 237 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 PRDX3P30048 256 aaKnown RBP12.47□□□□□ -0.41
LSM8-201ENST00000249299 HMOX2P30519 316 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 PIK3CBP42338 1070 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 GPLD1P80108 840 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 SLC14A1Q13336 389 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 BIRC2Q13490 618 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 SQSTM1Q13501 440 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 DOC2AQ14183 400 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 CLPPQ16740 277 aaPredicted RBP12.47□□□□□ -0.41
LSM8-201ENST00000249299 SLC5A12Q1EHB4 618 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 DEFB133Q30KQ1 61 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 FRG2Q64ET8 278 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 SUSD1Q6UWL2 747 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 FAM129CQ86XR2 697 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 LAS2Q8IYD9 372 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 TBC1D19Q8N5T2 526 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 CDYL2Q8N8U2 506 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 SUMF1Q8NBK3 374 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 PPFIBP2Q8ND30 876 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 TTLQ8NG68 377 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 OR2L3Q8NG85 312 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 TWIST2Q8WVJ9 160 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 CCT6BQ92526 530 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 NAT6Q93015 286 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 ZUFSPQ96AP4 578 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 C19orf60Q96EN9 201 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 FRG2BQ96QU4 278 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 SLC38A3Q99624 504 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 AIF1LQ9BQI0 150 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 ARRDC1-AS1Q9H2J1 176 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 BRF2Q9HAW0 419 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 RIC8BQ9NVN3 520 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.47□□□□□ -0.41
LSM8-201ENST00000249299 MARCOQ9UEW3 520 aaPredicted RBP12.47□□□□□ -0.41
LSM8-201ENST00000249299 TAC3Q9UHF0 121 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 GMEB2Q9UKD1 530 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 PLAGL1Q9UM63 463 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 TRIM33Q9UPN9 1127 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 RNF11Q9Y3C5 154 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 R4GN57 208 aa12.47□□□□□ -0.41
LSM8-201ENST00000249299 TRBV23OR9-2A0A075B6M9 112 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 A0A0G2JND7 137 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 A0A1B0GTL3 188 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 OR5K3A6NET4 321 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 RHPN2P1A8MT19 583 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 E7EQ34 232 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 SLC28A1O00337 649 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 FOXE1O00358 373 aaPredicted RBP12.46□□□□□ -0.41
LSM8-201ENST00000249299 PPM1DO15297 605 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 SDC3O75056 442 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 DCTN3O75935 186 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 UBXN7O94888 489 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 ENGP17813 658 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 GRK3P35626 688 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 ARL1P40616 181 aaPredicted RBP12.46□□□□□ -0.41
LSM8-201ENST00000249299 IDH3AP50213 366 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 ATXN3P54252 364 aaPredicted RBP12.46□□□□□ -0.41
LSM8-201ENST00000249299 CSTF3Q12996 717 aaKnown RBP12.46□□□□□ -0.41
LSM8-201ENST00000249299 IFT88Q13099 833 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 XKR7Q5GH72 579 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 MED27Q6P2C8 311 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 ACAD11Q709F0 780 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 TMPRSS11BQ86T26 416 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 CEP70Q8NHQ1 597 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 PATE1Q8WXA2 126 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 CD180Q99467 661 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 TMEM120AQ9BXJ8 343 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 CHRNA10Q9GZZ6 450 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 RHBGQ9H310 441 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 ELOVL6Q9H5J4 265 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 XKR8Q9H6D3 395 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 TNFRSF12AQ9NP84 129 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 MRPS30Q9NP92 439 aaKnown RBP12.46□□□□□ -0.41
LSM8-201ENST00000249299 ACSS2Q9NR19 701 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 NMRK1Q9NWW6 199 aa12.46□□□□□ -0.41
LSM8-201ENST00000249299 HRASLS2Q9NWW9 162 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms