RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 MMP12P39900 470 aa15.27■□□□□ 0.04
LRFN1-201ENST00000248668 MEF2AQ02078 507 aaPredicted RBP15.27■□□□□ 0.04
LRFN1-201ENST00000248668 VAC14Q08AM6 782 aa15.27■□□□□ 0.04
LRFN1-201ENST00000248668 PON2Q15165 354 aa15.27■□□□□ 0.04
LRFN1-201ENST00000248668 TMEM240Q5SV17 173 aa15.27■□□□□ 0.04
LRFN1-201ENST00000248668 ZNF551Q7Z340 670 aaPredicted RBP15.27■□□□□ 0.04
LRFN1-201ENST00000248668 TCAIMQ8N3R3 496 aa15.27■□□□□ 0.04
LRFN1-201ENST00000248668 L3MBTL4Q8NA19 623 aa15.27■□□□□ 0.04
LRFN1-201ENST00000248668 SAMD11Q96NU1 681 aa15.27■□□□□ 0.04
LRFN1-201ENST00000248668 MUS81Q96NY9 551 aa15.27■□□□□ 0.04
LRFN1-201ENST00000248668 KNL1Q8NG31 2342 aa15.27■□□□□ 0.03
LRFN1-201ENST00000248668 SPTBN5Q9NRC6 3674 aaKnown RBP15.27■□□□□ 0.03
LRFN1-201ENST00000248668 MAGEB17A8MXT2 336 aa15.27■□□□□ 0.03
LRFN1-201ENST00000248668 MMP20O60882 483 aa15.27■□□□□ 0.03
LRFN1-201ENST00000248668 ATG13O75143 517 aa15.27■□□□□ 0.03
LRFN1-201ENST00000248668 CREG1O75629 220 aa15.27■□□□□ 0.03
LRFN1-201ENST00000248668 DIRAS1O95057 198 aa15.27■□□□□ 0.03
LRFN1-201ENST00000248668 COX7A2P14406 83 aa15.27■□□□□ 0.03
LRFN1-201ENST00000248668 MAPK10P53779 464 aa15.27■□□□□ 0.03
LRFN1-201ENST00000248668 ARSFP54793 590 aa15.27■□□□□ 0.03
LRFN1-201ENST00000248668 FPGSQ05932 587 aa15.27■□□□□ 0.03
LRFN1-201ENST00000248668 RAET1GQ6H3X3 334 aa15.27■□□□□ 0.03
LRFN1-201ENST00000248668 ERAP2Q6P179 960 aa15.27■□□□□ 0.03
LRFN1-201ENST00000248668 TMPRSS11BQ86T26 416 aa15.27■□□□□ 0.03
LRFN1-201ENST00000248668 CMTM7Q96FZ5 175 aa15.27■□□□□ 0.03
LRFN1-201ENST00000248668 PANX1Q96RD7 426 aa15.27■□□□□ 0.03
LRFN1-201ENST00000248668 PKP4Q99569 1192 aa15.27■□□□□ 0.03
LRFN1-201ENST00000248668 SGK2Q9HBY8 427 aa15.27■□□□□ 0.03
LRFN1-201ENST00000248668 PCDHGA11Q9Y5H2 935 aa15.27■□□□□ 0.03
LRFN1-201ENST00000248668 CARNS1A5YM72 827 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 GRXCR2A6NFK2 248 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 WNT9AO14904 365 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 JUPP14923 745 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 KIR3DL1P43629 444 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 AP1S2P56377 157 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 IL1RL1Q01638 556 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 DMC1Q14565 340 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 FXNQ16595 210 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 TMEM53Q6P2H8 277 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 TECPR1Q7Z6L1 1165 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 TMEM132CQ8N3T6 1108 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 SMYD1Q8NB12 490 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 EXD2Q9NVH0 621 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 NDUFA13Q9P0J0 144 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 DMTF1Q9Y222 760 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 BTBD3Q9Y2F9 522 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 CEPT1Q9Y6K0 416 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 LINC01553A4QN01 128 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 SLCO2B1O94956 709 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 ABCB1P08183 1280 aaPredicted RBP15.26■□□□□ 0.03
LRFN1-201ENST00000248668 GSTM1P09488 218 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 EEF1B2P24534 225 aaKnown RBP15.26■□□□□ 0.03
LRFN1-201ENST00000248668 GSTM4Q03013 218 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 C16orf72Q14CZ0 275 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 ANKDD1AQ495B1 522 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 CES5AQ6NT32 575 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 ZCCHC8Q6NZY4 707 aaKnown RBP15.26■□□□□ 0.03
LRFN1-201ENST00000248668 ZDHHC13Q8IUH4 622 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 SMG7Q92540 1137 aaKnown RBP15.26■□□□□ 0.03
LRFN1-201ENST00000248668 ITCHQ96J02 903 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 CPPED1Q9BRF8 314 aaPredicted RBP15.26■□□□□ 0.03
LRFN1-201ENST00000248668 TMEM45AQ9NWC5 275 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 KLHL42Q9P2K6 505 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 ERVK-11Q9UQG0 969 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 SH2B3Q9UQQ2 575 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 TRANK1O15050 2925 aa15.26■□□□□ 0.03
LRFN1-201ENST00000248668 NTRK1P04629 796 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 CDH2P19022 906 aaPredicted RBP15.25■□□□□ 0.03
LRFN1-201ENST00000248668 IMPA1P29218 277 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 HOXD12P35452 270 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 RXRGP48443 463 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 ACSM2AQ08AH3 577 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 NEDD8Q15843 81 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 HKDC1Q2TB90 917 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 ACSM2BQ68CK6 577 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 LPCAT2Q7L5N7 544 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 TRMT11Q7Z4G4 463 aaKnown RBP15.25■□□□□ 0.03
LRFN1-201ENST00000248668 ADGRD2Q7Z7M1 963 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 C1orf52Q8N6N3 182 aaKnown RBP15.25■□□□□ 0.03
LRFN1-201ENST00000248668 UGT2B28Q9BY64 529 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 RMND5AQ9H871 391 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 VPS29Q9UBQ0 182 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 TCF20Q9UGU0 1960 aaKnown RBP15.25■□□□□ 0.03
LRFN1-201ENST00000248668 G3V2T6 193 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 KPNA5O15131 536 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 TRMUO75648 421 aaKnown RBP15.25■□□□□ 0.03
LRFN1-201ENST00000248668 RECQL5O94762 991 aaPredicted RBP15.25■□□□□ 0.03
LRFN1-201ENST00000248668 CATP04040 527 aaKnown RBP15.25■□□□□ 0.03
LRFN1-201ENST00000248668 PRPS2P11908 318 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 SHMT2P34897 504 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 SP140Q13342 867 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 UGT8Q16880 541 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 CATSPEREQ5SY80 951 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 DPPA4Q7L190 304 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 TMEM179BQ7Z7N9 219 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 SH3KBP1Q96B97 665 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 ZNF707Q96C28 371 aaPredicted RBP15.25■□□□□ 0.03
LRFN1-201ENST00000248668 FBXL8Q96CD0 374 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 CCM2Q9BSQ5 444 aa15.25■□□□□ 0.03
LRFN1-201ENST00000248668 GULP1Q9UBP9 304 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms