RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 NEUROG3Q9Y4Z2 214 aa16.38■□□□□ 0.21
SGPP1-201ENST00000247225 C2orf78A6NCI8 922 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 CKMT1AP12532 417 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 SDC1P18827 310 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 KDELR2P33947 212 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 SPIBQ01892 262 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 HKDC1Q2TB90 917 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 RTP2Q5QGT7 225 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 IER5LQ5T953 404 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 KIAA1614Q5VZ46 1190 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 LRRC66Q68CR7 880 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 KLHL17Q6TDP4 642 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 GALNT7Q86SF2 657 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 HMGN2P46Q86SG4 172 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 TMEM173Q86WV6 379 aaPredicted RBP16.37■□□□□ 0.21
SGPP1-201ENST00000247225 C7orf57Q8NEG2 295 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 TRPV1Q8NER1 839 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 RHOXF1Q8NHV9 184 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 ARHGAP39Q9C0H5 1083 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 TRIM39Q9HCM9 518 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 OLA1Q9NTK5 396 aaKnown RBP16.37■□□□□ 0.21
SGPP1-201ENST00000247225 MBD1Q9UIS9 605 aaPredicted RBP16.37■□□□□ 0.21
SGPP1-201ENST00000247225 ACSL6Q9UKU0 697 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 SAMD4AQ9UPU9 718 aaKnown RBP16.37■□□□□ 0.21
SGPP1-201ENST00000247225 MTMR11A4FU01 709 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 OR2AG2A6NM03 316 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 DRGXA6NNA5 263 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 H3BM21 787 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 RFPL2O75678 378 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 NPPAP01160 153 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 LAMP1P11279 417 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 GRK5P34947 590 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 FEN1P39748 380 aaKnown RBP16.37■□□□□ 0.21
SGPP1-201ENST00000247225 ARF5P84085 180 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 IRF8Q02556 426 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 CHIT1Q13231 466 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 MAD2L1Q13257 205 aaPredicted RBP16.37■□□□□ 0.21
SGPP1-201ENST00000247225 ARMCX4Q5H9R4 360 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 CCDC71Q8IV32 467 aaPredicted RBP16.37■□□□□ 0.21
SGPP1-201ENST00000247225 SMAD5Q99717 465 aaKnown RBP16.37■□□□□ 0.21
SGPP1-201ENST00000247225 CNPPD1Q9BV87 410 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 IL17CQ9P0M4 197 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 A0A0G2JMZ2 1700 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 LRRC37A2A6NM11 1700 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 XIRP2A4UGR9 3374 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 FAM227AF5H4B4 570 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 APOA1P02647 267 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 SOAT1P35610 550 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 GRK3P35626 688 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 PPP5CP53041 499 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 KIAA0040Q15053 153 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 MFSD14CQ5VZR4 134 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 RTN4RL1Q86UN2 441 aaPredicted RBP16.37■□□□□ 0.21
SGPP1-201ENST00000247225 LYSMD2Q8IV50 215 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 OR9Q2Q8NGE9 314 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 VANGL1Q8TAA9 524 aaPredicted RBP16.37■□□□□ 0.21
SGPP1-201ENST00000247225 SLIRPQ9GZT3 109 aaKnown RBP16.37■□□□□ 0.21
SGPP1-201ENST00000247225 CLMPQ9H6B4 373 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 PDFQ9HBH1 243 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 THG1LQ9NWX6 298 aaKnown RBP16.37■□□□□ 0.21
SGPP1-201ENST00000247225 QPCTLQ9NXS2 382 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 B3GNT3Q9Y2A9 372 aa16.37■□□□□ 0.21
SGPP1-201ENST00000247225 IGLV3-10A0A075B6K4 115 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 LOC110117498-PIK3R3F6TDL0 507 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 J3KTA2 159 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 APOL3O95236 402 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 ALOX5P09917 674 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 ELNP15502 786 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 DNAJA1P31689 397 aaKnown RBP16.36■□□□□ 0.21
SGPP1-201ENST00000247225 NKX3-2P78367 333 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 CCDC85BQ15834 202 aaPredicted RBP16.36■□□□□ 0.21
SGPP1-201ENST00000247225 SPANXN2Q5MJ10 180 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 ZNF605Q86T29 641 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 RBFAQ8N0V3 343 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 GTF3C2Q8WUA4 911 aaPredicted RBP16.36■□□□□ 0.21
SGPP1-201ENST00000247225 TMEM203Q969S6 136 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 RNF38Q9H0F5 515 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 TMEM184CQ9NVA4 438 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 GLYATL1P3A0A0U1RQE8 302 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 DYTNA2CJ06 578 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 COCHO43405 550 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 KDELR3O43731 214 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 KCNK2O95069 426 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 SLC19A1P41440 591 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 CTSKP43235 329 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 RAB15P59190 212 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 PCBP2Q15366 365 aaKnown RBP eCLIP16.36■□□□□ 0.21
SGPP1-201ENST00000247225 RFX4Q33E94 735 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 SHQ1Q6PI26 577 aaKnown RBP16.36■□□□□ 0.21
SGPP1-201ENST00000247225 SERPINA13PQ6UXR4 307 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 CYP2U1Q7Z449 544 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 SERINC5Q86VE9 423 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 MYO19Q96H55 970 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 ZNF300Q96RE9 604 aaPredicted RBP16.36■□□□□ 0.21
SGPP1-201ENST00000247225 CPPED1Q9BRF8 314 aaPredicted RBP16.36■□□□□ 0.21
SGPP1-201ENST00000247225 ITPAQ9BY32 194 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 TIGARQ9NQ88 270 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 SPASTQ9UBP0 616 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 MAP4K5Q9Y4K4 846 aa16.36■□□□□ 0.21
SGPP1-201ENST00000247225 MAGEB17A8MXT2 336 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms