RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 PRMT2P55345 433 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 ZNF423Q2M1K9 1284 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 CTC1Q2NKJ3 1217 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 LSM12Q3MHD2 195 aaKnown RBP10.86□□□□□ -0.67
MSH6-201ENST00000234420 ZNF720Q7Z2F6 126 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.86□□□□□ -0.67
MSH6-201ENST00000234420 IGDCC4Q8TDY8 1250 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 OSBPL7Q9BZF2 842 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 ARL6Q9H0F7 186 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 SACM1LQ9NTJ5 587 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 FBXL12Q9NXK8 326 aa10.86□□□□□ -0.67
MSH6-201ENST00000234420 CYP3A7-CYP3A51PA0A087WV96 503 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 A0A1W2PRQ8 180 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 SH3PXD2BA1X283 911 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 CBY3A6NI87 242 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 ATG13O75143 517 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 OTCP00480 354 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 C8AP07357 584 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 CYP3A7P24462 503 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 ZNF616Q08AN1 781 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 CTBP1Q13363 440 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 STK11Q15831 433 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 RBM48Q5RL73 367 aaKnown RBP10.85□□□□□ -0.67
MSH6-201ENST00000234420 MARCH9Q86YJ5 346 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 ADAMTS15Q8TE58 950 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 TPT1P8Q9HAU6 139 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 MRPS30Q9NP92 439 aaKnown RBP10.85□□□□□ -0.67
MSH6-201ENST00000234420 CRTAC1Q9NQ79 661 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 KLRG2A4D1S0 409 aaPredicted RBP10.85□□□□□ -0.67
MSH6-201ENST00000234420 VILLO15195 856 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 SLC34A2O95436 690 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 LSM8O95777 96 aaKnown RBP10.85□□□□□ -0.67
MSH6-201ENST00000234420 TSPAN15O95858 294 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 RPL3P39023 403 aaKnown RBP10.85□□□□□ -0.67
MSH6-201ENST00000234420 CD97P48960 835 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 GALK2Q01415 458 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 MERTKQ12866 999 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 COL28A1Q2UY09 1125 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 IQCHQ86VS3 1027 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 MREGQ8N565 214 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 C19orf12Q9NSK7 152 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 AGO1Q9UL18 857 aaKnown RBP10.85□□□□□ -0.67
MSH6-201ENST00000234420 CMAHPQ9Y471 501 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 FRMPD4Q14CM0 1322 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 AGAP5A6NIR3 686 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 DFNA5O60443 496 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 BCAS1O75363 584 aaPredicted RBP10.85□□□□□ -0.67
MSH6-201ENST00000234420 AKAP3O75969 853 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 CDH11P55287 796 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 PTGR1Q14914 329 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 ALG10BQ5I7T1 473 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 RNASEH2BQ5TBB1 312 aaKnown RBP10.85□□□□□ -0.67
MSH6-201ENST00000234420 CMC1Q7Z7K0 106 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 PSTKQ8IV42 348 aaKnown RBP10.85□□□□□ -0.67
MSH6-201ENST00000234420 NKAPQ8N5F7 415 aaKnown RBP10.85□□□□□ -0.67
MSH6-201ENST00000234420 AVL9Q8NBF6 648 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 OR5T2Q8NGG2 359 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 ARHGEF4Q9NR80 690 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 MYEF2Q9P2K5 600 aaKnown RBP10.85□□□□□ -0.67
MSH6-201ENST00000234420 PCDHGC3Q9UN70 934 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 SLC35F4A4IF30 521 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 FOXO6A8MYZ6 492 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 LATS1O95835 1130 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 RPLP2P05387 115 aaKnown RBP10.85□□□□□ -0.67
MSH6-201ENST00000234420 CAP1Q01518 475 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 PAPD4Q6PIY7 484 aaKnown RBP10.85□□□□□ -0.67
MSH6-201ENST00000234420 CUZD1Q86UP6 607 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 ABRAQ8N0Z2 381 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 OR6K6Q8NGW6 343 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 BSNDQ8WZ55 320 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 CREB3L1Q96BA8 519 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 C3orf49Q96BT1 292 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 MAELQ96JY0 434 aaKnown RBP10.85□□□□□ -0.67
MSH6-201ENST00000234420 IL36AQ9UHA7 158 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 CNTNAP1P78357 1384 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 A0A0J9YVX5 310 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 DAPL1A0PJW8 107 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 SYNGR4O95473 234 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 CSTBP04080 98 aaKnown RBP10.85□□□□□ -0.67
MSH6-201ENST00000234420 IDSP22304 550 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 MIPP30301 263 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 ACSBG2Q5FVE4 666 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 VSTM1Q6UX27 236 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 CEP97Q8IW35 865 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 MAP3K3Q99759 626 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 PSD2Q9BQI7 771 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 TBL1XR1Q9BZK7 514 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 TGIF2Q9GZN2 237 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 USP29Q9HBJ7 922 aa10.85□□□□□ -0.67
MSH6-201ENST00000234420 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 A0A1W2PPL8 197 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 A6NLC8 198 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 EI24O14681 340 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 TNFSF12O43508 249 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 NME6O75414 186 aaPredicted RBP10.84□□□□□ -0.67
MSH6-201ENST00000234420 HOXD12P35452 270 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 RHDQ02161 417 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 TAF10Q12962 218 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 CDK10Q15131 360 aa10.84□□□□□ -0.67
MSH6-201ENST00000234420 TSTQ16762 297 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms