RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 PICALMQ13492 652 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 CSHL1Q14406 222 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 DPYSL2Q16555 572 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 RUNDC3AQ59EK9 446 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 ZNF678Q5SXM1 525 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 LRRC66Q68CR7 880 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 DNAAF3Q8N9W5 541 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 OR8D4Q8NGM9 314 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 KIAA1143Q96AT1 154 aaPredicted RBP12.67□□□□□ -0.38
MSH2-201ENST00000233146 ZBED6CLQ96FA7 236 aaPredicted RBP12.67□□□□□ -0.38
MSH2-201ENST00000233146 MIXL1Q9H2W2 232 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 MAGIXQ9H6Y5 334 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 GSN-AS1Q9NRJ2 163 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 AIG1Q9NVV5 245 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 ABCG2Q9UNQ0 655 aa12.67□□□□□ -0.38
MSH2-201ENST00000233146 GRXCR2A6NFK2 248 aa12.66□□□□□ -0.38
MSH2-201ENST00000233146 SLC22A3O75751 556 aa12.66□□□□□ -0.38
MSH2-201ENST00000233146 AP2A1O95782 977 aa12.66□□□□□ -0.38
MSH2-201ENST00000233146 UNC50Q53HI1 259 aa12.66□□□□□ -0.38
MSH2-201ENST00000233146 PSTKQ8IV42 348 aaKnown RBP12.66□□□□□ -0.38
MSH2-201ENST00000233146 STX19Q8N4C7 294 aa12.66□□□□□ -0.38
MSH2-201ENST00000233146 DNAJC22Q8N4W6 341 aa12.66□□□□□ -0.38
MSH2-201ENST00000233146 LPCAT1Q8NF37 534 aa12.66□□□□□ -0.38
MSH2-201ENST00000233146 PPM1MQ96MI6 270 aa12.66□□□□□ -0.38
MSH2-201ENST00000233146 SORBS1Q9BX66 1292 aaKnown RBP12.66□□□□□ -0.38
MSH2-201ENST00000233146 MAGEB5Q9BZ81 275 aa12.66□□□□□ -0.38
MSH2-201ENST00000233146 MCOLN1Q9GZU1 580 aa12.66□□□□□ -0.38
MSH2-201ENST00000233146 EMC7Q9NPA0 242 aa12.66□□□□□ -0.38
MSH2-201ENST00000233146 FAM240BA0A1B0GVZ2 78 aa12.66□□□□□ -0.38
MSH2-201ENST00000233146 CLCA1A8K7I4 914 aa12.66□□□□□ -0.38
MSH2-201ENST00000233146 GRAP2O75791 330 aa12.66□□□□□ -0.38
MSH2-201ENST00000233146 APOL3O95236 402 aa12.66□□□□□ -0.38
MSH2-201ENST00000233146 ZNF3P17036 446 aa12.66□□□□□ -0.38
MSH2-201ENST00000233146 HK3P52790 923 aa12.66□□□□□ -0.38
MSH2-201ENST00000233146 FCN2Q15485 313 aa12.66□□□□□ -0.38
MSH2-201ENST00000233146 ATRAIDQ6UW56 229 aa12.66□□□□□ -0.38
MSH2-201ENST00000233146 SPATA19Q7Z5L4 167 aa12.66□□□□□ -0.38
MSH2-201ENST00000233146 ADGRD2Q7Z7M1 963 aa12.66□□□□□ -0.38
MSH2-201ENST00000233146 NIM1KQ8IY84 436 aa12.66□□□□□ -0.38
MSH2-201ENST00000233146 PHOSPHO2Q8TCD6 241 aa12.66□□□□□ -0.38
MSH2-201ENST00000233146 CRELD1Q96HD1 420 aa12.66□□□□□ -0.38
MSH2-201ENST00000233146 CSPG4P5Q96PW8 444 aa12.66□□□□□ -0.38
MSH2-201ENST00000233146 NMUR1Q9HB89 426 aa12.66□□□□□ -0.38
MSH2-201ENST00000233146 ABCB9Q9NP78 766 aa12.66□□□□□ -0.38
MSH2-201ENST00000233146 PDLIM7Q9NR12 457 aa12.66□□□□□ -0.38
MSH2-201ENST00000233146 DPYSL4O14531 572 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 GNB5O14775 395 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 GSTA4O15217 222 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 AOC2O75106 756 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 H2AFB1P0C5Y9 115 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 H2AFB2P0C5Z0 115 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 HSMCR30P0CW71 290 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 CLCN3P51790 818 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 FOXA1P55317 472 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 PTPRRQ15256 657 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 PYDC2Q56P42 97 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 ERICH5Q6P6B1 374 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 CEP68Q76N32 757 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 OR6C4Q8NGE1 309 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 TBC1D20Q96BZ9 403 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 PRDM12Q9H4Q4 367 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 NDRG2Q9UN36 371 aaKnown RBP12.65□□□□□ -0.38
MSH2-201ENST00000233146 RAB19A4D1S5 217 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 AZIN1O14977 448 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 HCN1O60741 890 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 MMP20O60882 483 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 PSIP1O75475 530 aaKnown RBP12.65□□□□□ -0.38
MSH2-201ENST00000233146 ITGB5P18084 799 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 LHCGRP22888 699 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 ASPAP45381 313 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 MAN2A2P49641 1150 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 GDI2P50395 445 aaKnown RBP12.65□□□□□ -0.38
MSH2-201ENST00000233146 RPP38P78345 283 aaKnown RBP12.65□□□□□ -0.38
MSH2-201ENST00000233146 LAPTM4AQ15012 233 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 SMAD2Q15796 467 aaKnown RBP12.65□□□□□ -0.38
MSH2-201ENST00000233146 KANK2Q63ZY3 851 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 NADSYN1Q6IA69 706 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 TMEM107Q6UX40 140 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 ABI3BPQ7Z7G0 1075 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 CNTN4Q8IWV2 1026 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 ZBTB45Q96K62 511 aaPredicted RBP12.65□□□□□ -0.38
MSH2-201ENST00000233146 CNPPD1Q9BV87 410 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 SPASTQ9UBP0 616 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 MKL2Q9ULH7 1088 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 RPH3AQ9Y2J0 694 aaPredicted RBP12.65□□□□□ -0.38
MSH2-201ENST00000233146 CSADQ9Y600 493 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 PMS2P1A4D2B8 440 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 INMT-MINDY4F8WBC2 141 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 QSOX1O00391 747 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 SELENOFO60613 162 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 STSP08842 583 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 TSPAN19P0C672 248 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 LINC00032P0C843 101 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 HLA-FP30511 346 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 PTGER2P43116 358 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 ZNF81P51508 661 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 CSTF1Q05048 431 aaKnown RBP12.65□□□□□ -0.38
MSH2-201ENST00000233146 SGCAQ16586 387 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 CARD16Q5EG05 197 aa12.65□□□□□ -0.38
MSH2-201ENST00000233146 RGS7BPQ6MZT1 257 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms