RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 ITGB1BP2Q9UKP3 347 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 SCML2Q9UQR0 700 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 RUVBL1Q9Y265 456 aaKnown RBP13.37□□□□□ -0.27
NFKB1-201ENST00000226574 RP1P56715 2156 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 CCNDBP1O95273 360 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 KLK1P06870 262 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 FPR1P21462 350 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 FDXRP22570 491 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 RYKP34925 604 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 STK19P49842 368 aaPredicted RBP13.37□□□□□ -0.27
NFKB1-201ENST00000226574 MAPK12P53778 367 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 ABATP80404 500 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 SCN1BQ07699 218 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.37□□□□□ -0.27
NFKB1-201ENST00000226574 IER5LQ5T953 404 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 CLEC14AQ86T13 490 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 RBM23Q86U06 439 aaKnown RBP13.37□□□□□ -0.27
NFKB1-201ENST00000226574 OR8H1Q8NGG4 311 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 NFKBIDQ8NI38 313 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 NDNFQ8TB73 568 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 TEX47Q8TBZ9 253 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 ZFP3Q96NJ6 502 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 ZNF382Q96SR6 550 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 SLC35A5Q9BS91 424 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 INPP5KQ9BT40 448 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 ITPAQ9BY32 194 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 RNF208Q9H0X6 261 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 EHD1Q9H4M9 534 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 AGPAT4Q9NRZ5 378 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 ACSL6Q9UKU0 697 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 PLCH1Q4KWH8 1693 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 TRAV19A0A0A6YYK7 116 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 CPNE3O75131 537 aaKnown RBP13.37□□□□□ -0.27
NFKB1-201ENST00000226574 CHRNA1P02708 482 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 RPLP2P05387 115 aaKnown RBP13.37□□□□□ -0.27
NFKB1-201ENST00000226574 ARCN1P48444 511 aaKnown RBP13.37□□□□□ -0.27
NFKB1-201ENST00000226574 UBXN11Q5T124 520 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 KIAA1614Q5VZ46 1190 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 NEK10Q6ZWH5 1172 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 RNF44Q7L0R7 432 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 ZNF558Q96NG5 402 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 FCRL4Q96PJ5 515 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 PSKH2Q96QS6 385 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 RNF38Q9H0F5 515 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 FLRT1Q9NZU1 646 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 ADAM30Q9UKF2 790 aa13.37□□□□□ -0.27
NFKB1-201ENST00000226574 A0A1W2PRU2 124 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 BTN3A3O00478 584 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 SOCS7O14512 581 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 PDYNP01213 254 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 PPIBP23284 216 aaKnown RBP13.36□□□□□ -0.27
NFKB1-201ENST00000226574 KDELR2P33947 212 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 SHMT2P34897 504 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 RGRP47804 291 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 IQCCQ4KMZ1 466 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 KIAA1161Q6NSJ0 714 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 MED27Q6P2C8 311 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 DNAJB7Q7Z6W7 309 aaPredicted RBP13.36□□□□□ -0.27
NFKB1-201ENST00000226574 ADGRG2Q8IZP9 1017 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 RHEBL1Q8TAI7 183 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 SLC9A6Q92581 669 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 SLC38A2Q96QD8 506 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 ARMC1Q9NVT9 282 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 NLE1Q9NVX2 485 aaPredicted RBP13.36□□□□□ -0.27
NFKB1-201ENST00000226574 NME7Q9Y5B8 376 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 ITGB4P16144 1822 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 OR6C70A6NIJ9 312 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 ISM1B1AKI9 464 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 TLX2O43763 284 aaPredicted RBP13.36□□□□□ -0.27
NFKB1-201ENST00000226574 FCER2P06734 321 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 PORP16435 677 aaPredicted RBP13.36□□□□□ -0.27
NFKB1-201ENST00000226574 NTSP30990 170 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 DCTP40126 519 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 CLCA4Q14CN2 919 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 LRRC66Q68CR7 880 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 ZNF730Q6ZMV8 503 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 DCDC5Q6ZRR9 648 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 C17orf64Q86WR6 236 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 ZFAND4Q86XD8 727 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 MFSD6LQ8IWD5 586 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 SCAIQ8N9R8 606 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 AQP11Q8NBQ7 271 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 ING5Q8WYH8 240 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 USP7Q93009 1102 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 CD244Q9BZW8 370 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 DHRS7Q9Y394 339 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 PCDHGA11Q9Y5H2 935 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 A0A1W2PRB8 838 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 PLK4O00444 970 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 STX16O14662 325 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 NR4A2P43354 598 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 ASMTP46597 345 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 AP1S1P61966 158 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 ZNF33AQ06730 810 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 MTA1Q13330 715 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 SCARB2Q14108 478 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 Q6ZPB1 254 aaPredicted RBP13.36□□□□□ -0.27
NFKB1-201ENST00000226574 KLK6Q92876 244 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 BIRC8Q96P09 236 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 ZNF607Q96SK3 696 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms