RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 COL21A1Q96P44 957 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 UNC93B1Q9H1C4 597 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 TFB2MQ9H5Q4 396 aaKnown RBP12.92□□□□□ -0.34
COL1A1-201ENST00000225964 VPS29Q9UBQ0 182 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 CNTN6Q9UQ52 1028 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 MAU2Q9Y6X3 613 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 GABRDO14764 452 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 JUNP05412 331 aaKnown RBP12.92□□□□□ -0.34
COL1A1-201ENST00000225964 TYSND1Q2T9J0 566 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 SPIN4Q56A73 249 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 ADGRF1Q5T601 910 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 SSX6Q7RTT6 188 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 SPOCK2Q92563 424 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 BORCS8Q96FH0 119 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 C7orf26Q96N11 449 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 AIFM2Q9BRQ8 373 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 SLC2A4RGQ9NR83 387 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 FGF18O76093 207 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 PRDX6P30041 224 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 ARRB1P49407 418 aaPredicted RBP12.92□□□□□ -0.34
COL1A1-201ENST00000225964 GPR153Q6NV75 609 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 BRAT1Q6PJG6 821 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 P2RY8Q86VZ1 359 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 UCK2Q9BZX2 261 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 FAM124BQ9H5Z6 455 aaPredicted RBP12.92□□□□□ -0.34
COL1A1-201ENST00000225964 SNTG1Q9NSN8 517 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 UPK3BL1B0FP48 263 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 UPK3BL2E5RIL1 263 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 CLDN7O95471 211 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 HLA-EP13747 358 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 JAM2P57087 298 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 ARPC4P59998 168 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 SCGB2B2Q4G0G5 96 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 C4orf32Q8N8J7 132 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 AVL9Q8NBF6 648 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 GLB1L3Q8NCI6 653 aaPredicted RBP12.91□□□□□ -0.34
COL1A1-201ENST00000225964 CENPNQ96H22 339 aaPredicted RBP12.91□□□□□ -0.34
COL1A1-201ENST00000225964 TTYH2Q9BSA4 534 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 GIN1Q9NXP7 522 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 COMMD3Q9UBI1 195 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 WASF3Q9UPY6 502 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 A0A1B0GVT2 93 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 ZNF670-ZNF695F2Z2N8 137 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 KAT7O95251 611 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 RPLP0P05388 317 aaKnown RBP12.91□□□□□ -0.34
COL1A1-201ENST00000225964 ODF4Q2M2E3 257 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 HGSNATQ68CP4 663 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 ATRNO75882 1429 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 MAP2K7O14733 419 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 ENGP17813 658 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 HSD3B2P26439 372 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 SOWAHAQ2M3V2 549 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 ZNF565Q8N9K5 539 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 EZH1Q92800 747 aaPredicted RBP12.91□□□□□ -0.34
COL1A1-201ENST00000225964 SUSD3Q96L08 255 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 NODALQ96S42 347 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 MAF1Q9H063 256 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 Q9N2J8 555 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 EIF2B3Q9NR50 452 aaKnown RBP12.91□□□□□ -0.34
COL1A1-201ENST00000225964 IFT52Q9Y366 437 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 PCDHGB1Q9Y5G3 927 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 SPATA31D1Q6ZQQ2 1576 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 SLC33A1O00400 549 aaPredicted RBP12.91□□□□□ -0.34
COL1A1-201ENST00000225964 KLF8O95600 359 aaPredicted RBP12.91□□□□□ -0.34
COL1A1-201ENST00000225964 SCNN1AP37088 669 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 CASP6P55212 293 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 KCNH6Q9H252 994 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 TDP1Q9NUW8 608 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 THUMPD1Q9NXG2 353 aaKnown RBP12.91□□□□□ -0.34
COL1A1-201ENST00000225964 TRIM64BA6NI03 449 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 MTHFD1P11586 935 aaKnown RBP12.91□□□□□ -0.34
COL1A1-201ENST00000225964 BNIP1Q12981 228 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 TMEM44Q2T9K0 475 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 PLCZ1Q86YW0 608 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 FAM156AQ8NDB6 213 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 OR6N1Q8NGY5 312 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 OR5K1Q8NHB7 308 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 POF1BQ8WVV4 589 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 ACOT12Q8WYK0 555 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 LENG8Q96PV6 779 aaPredicted RBP12.91□□□□□ -0.34
COL1A1-201ENST00000225964 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.91□□□□□ -0.34
COL1A1-201ENST00000225964 RC3H2Q9HBD1 1191 aaKnown RBP12.91□□□□□ -0.34
COL1A1-201ENST00000225964 SLC22A14Q9Y267 594 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 POP7O75817 140 aaKnown RBP12.91□□□□□ -0.34
COL1A1-201ENST00000225964 GPR33Q49SQ1 333 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 RBM48Q5RL73 367 aaKnown RBP12.91□□□□□ -0.34
COL1A1-201ENST00000225964 OGFOD2Q6N063 350 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 OR10G2Q8NGC3 310 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 NFKBIDQ8NI38 313 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 CNDP2Q96KP4 475 aaKnown RBP12.91□□□□□ -0.34
COL1A1-201ENST00000225964 CITED4Q96RK1 184 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 POLR2J3Q9H1A7 115 aaKnown RBP12.91□□□□□ -0.34
COL1A1-201ENST00000225964 IGSF9Q9P2J2 1179 aa12.91□□□□□ -0.34
COL1A1-201ENST00000225964 FABP12A6NFH5 140 aa12.9□□□□□ -0.34
COL1A1-201ENST00000225964 LDB2O43679 373 aa12.9□□□□□ -0.34
COL1A1-201ENST00000225964 FHP07954 510 aa12.9□□□□□ -0.34
COL1A1-201ENST00000225964 MATN1P21941 496 aa12.9□□□□□ -0.34
COL1A1-201ENST00000225964 ACVRL1P37023 503 aa12.9□□□□□ -0.34
COL1A1-201ENST00000225964 RORCP51449 518 aa12.9□□□□□ -0.34
COL1A1-201ENST00000225964 GDF10P55107 478 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms