RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 TMEM168Q9H0V1 697 aa16.21■□□□□ 0.19
TVP23C-201ENST00000225576 ACTL8Q9H568 366 aa16.21■□□□□ 0.19
TVP23C-201ENST00000225576 GEMIN8Q9NWZ8 242 aaKnown RBP16.21■□□□□ 0.19
TVP23C-201ENST00000225576 VPS29Q9UBQ0 182 aa16.21■□□□□ 0.19
TVP23C-201ENST00000225576 TBC1D29Q9UFV1 150 aa16.21■□□□□ 0.19
TVP23C-201ENST00000225576 PNMA8BQ9ULN7 279 aaPredicted RBP16.21■□□□□ 0.19
TVP23C-201ENST00000225576 COLEC10Q9Y6Z7 277 aa16.21■□□□□ 0.19
TVP23C-201ENST00000225576 A0A1W2PPV9 198 aa16.2■□□□□ 0.18
TVP23C-201ENST00000225576 OR52A4PA6NMU1 304 aa16.2■□□□□ 0.18
TVP23C-201ENST00000225576 METTL12A8MUP2 240 aa16.2■□□□□ 0.18
TVP23C-201ENST00000225576 SCAMP1O15126 338 aa16.2■□□□□ 0.18
TVP23C-201ENST00000225576 NDUFS2O75306 463 aa16.2■□□□□ 0.18
TVP23C-201ENST00000225576 RASGRP1O95267 797 aa16.2■□□□□ 0.18
TVP23C-201ENST00000225576 ATP6V1G2O95670 118 aa16.2■□□□□ 0.18
TVP23C-201ENST00000225576 PRPS2P11908 318 aa16.2■□□□□ 0.18
TVP23C-201ENST00000225576 AK4P27144 223 aaPredicted RBP16.2■□□□□ 0.18
TVP23C-201ENST00000225576 IL12AP29459 219 aa16.2■□□□□ 0.18
TVP23C-201ENST00000225576 PKLRP30613 574 aa16.2■□□□□ 0.18
TVP23C-201ENST00000225576 MTTPP55157 894 aa16.2■□□□□ 0.18
TVP23C-201ENST00000225576 SLBPQ14493 270 aaKnown RBP eCLIP16.2■□□□□ 0.18
TVP23C-201ENST00000225576 TRMT5Q32P41 509 aaKnown RBP16.2■□□□□ 0.18
TVP23C-201ENST00000225576 USP39Q53GS9 565 aaKnown RBP16.2■□□□□ 0.18
TVP23C-201ENST00000225576 C6orf163Q5TEZ5 329 aa16.2■□□□□ 0.18
TVP23C-201ENST00000225576 BNC2Q6ZN30 1099 aaPredicted RBP16.2■□□□□ 0.18
TVP23C-201ENST00000225576 C17orf64Q86WR6 236 aa16.2■□□□□ 0.18
TVP23C-201ENST00000225576 HID1Q8IV36 788 aa16.2■□□□□ 0.18
TVP23C-201ENST00000225576 SLC22A18ASQ8N1D0 253 aa16.2■□□□□ 0.18
TVP23C-201ENST00000225576 FAM160A2Q8N612 972 aaPredicted RBP16.2■□□□□ 0.18
TVP23C-201ENST00000225576 CADM4Q8NFZ8 388 aa16.2■□□□□ 0.18
TVP23C-201ENST00000225576 OR2L8Q8NGY9 312 aa16.2■□□□□ 0.18
TVP23C-201ENST00000225576 SH3KBP1Q96B97 665 aa16.2■□□□□ 0.18
TVP23C-201ENST00000225576 FCRL1Q96LA6 429 aa16.2■□□□□ 0.18
TVP23C-201ENST00000225576 KIR3DX1Q9H7L2 352 aa16.2■□□□□ 0.18
TVP23C-201ENST00000225576 PELI2Q9HAT8 420 aa16.2■□□□□ 0.18
TVP23C-201ENST00000225576 SCHIP1Q9P0W5 487 aaPredicted RBP16.2■□□□□ 0.18
TVP23C-201ENST00000225576 MUC3AQ02505 3323 aa16.2■□□□□ 0.18
TVP23C-201ENST00000225576 SPTY2D1-AS1A0A0U1RR47 76 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 PIPSLA2A3N6 862 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 FOXE1O00358 373 aaPredicted RBP16.19■□□□□ 0.18
TVP23C-201ENST00000225576 STK25O00506 426 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 BCKDHAP12694 445 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 CDH1P12830 882 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 AMD1P17707 334 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 ACTR1BP42025 376 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 ACTR1AP61163 376 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 PSME3P61289 254 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 C8orf82Q6P1X6 216 aaPredicted RBP16.19■□□□□ 0.18
TVP23C-201ENST00000225576 RETREG3Q86VR2 466 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 FAM129CQ86XR2 697 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 DCP2Q8IU60 420 aaKnown RBP16.19■□□□□ 0.18
TVP23C-201ENST00000225576 LIX1Q8N485 282 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 C2orf73Q8N5S3 287 aaPredicted RBP16.19■□□□□ 0.18
TVP23C-201ENST00000225576 LINC01555Q8NAE3 123 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 GLB1L3Q8NCI6 653 aaPredicted RBP16.19■□□□□ 0.18
TVP23C-201ENST00000225576 ABHD11Q8NFV4 315 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 OR52E1Q8NGJ3 308 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 HUS1BQ8NHY5 278 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 WDR60Q8WVS4 1066 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 APIPQ96GX9 242 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 CDRT15Q96T59 188 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 MTERF1Q99551 399 aaKnown RBP16.19■□□□□ 0.18
TVP23C-201ENST00000225576 IER2Q9BTL4 223 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 MAP10Q9P2G4 905 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 THEGQ9P2T0 379 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 TAC3Q9UHF0 121 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 BAIAP2L1Q9UHR4 511 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 CROTQ9UKG9 612 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 PCDHGA7Q9Y5G6 932 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 A6NCN8 305 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 CCDC154A6NI56 674 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 MAGEB17A8MXT2 336 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 C9JVG2 144 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 EEDO75530 441 aaKnown RBP16.19■□□□□ 0.18
TVP23C-201ENST00000225576 THEGLP0DJG4 465 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 PCNAP12004 261 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 CXCR2P25025 360 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 CD27P26842 260 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 ILF3Q12906 894 aaKnown RBP eCLIP16.19■□□□□ 0.184e-7■■■■□ 24.8
TVP23C-201ENST00000225576 MTAPQ13126 283 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 EIF2B5Q13144 721 aaKnown RBP16.19■□□□□ 0.18
TVP23C-201ENST00000225576 KPNB1Q14974 876 aaKnown RBP16.19■□□□□ 0.18
TVP23C-201ENST00000225576 NRROSQ86YC3 692 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 KRT78Q8N1N4 520 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 CCL4L1Q8NHW4 92 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 GPBAR1Q8TDU6 330 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 SNX19Q92543 992 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 KLHDC7BQ96G42 594 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 ZBTB18Q99592 522 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 NRTNQ99748 197 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 HOPXQ9BPY8 73 aaPredicted RBP16.19■□□□□ 0.18
TVP23C-201ENST00000225576 DPY30Q9C005 99 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 PITHD1Q9GZP4 211 aaPredicted RBP16.19■□□□□ 0.18
TVP23C-201ENST00000225576 GID8Q9NWU2 228 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 NMRK1Q9NWW6 199 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 LEF1Q9UJU2 399 aaPredicted RBP16.19■□□□□ 0.18
TVP23C-201ENST00000225576 PPT2Q9UMR5 302 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 SIT1Q9Y3P8 196 aa16.19■□□□□ 0.18
TVP23C-201ENST00000225576 CFLARO15519 480 aa16.18■□□□□ 0.18
TVP23C-201ENST00000225576 EML2O95834 649 aa16.18■□□□□ 0.18
TVP23C-201ENST00000225576 NPPAP01160 153 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms