RNA–Protein interactions for RNA: ENST00000222345.10

SIPA1L3-201, Transcript of signal induced proliferation associated 1 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1L3, Length 7,987 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-201ENST00000222345 COQ8BQ96D53 544 aa13.4□□□□□ -0.26
SIPA1L3-201ENST00000222345 CSPG4P5Q96PW8 444 aa13.4□□□□□ -0.26
SIPA1L3-201ENST00000222345 P2RX2Q9UBL9 471 aa13.4□□□□□ -0.26
SIPA1L3-201ENST00000222345 UBXN7O94888 489 aa13.4□□□□□ -0.26
SIPA1L3-201ENST00000222345 CAPZA1P52907 286 aa13.4□□□□□ -0.26
SIPA1L3-201ENST00000222345 WDR4P57081 412 aaKnown RBP13.4□□□□□ -0.26
SIPA1L3-201ENST00000222345 SVBPQ8N300 66 aa13.4□□□□□ -0.26
SIPA1L3-201ENST00000222345 MYCLP1P12525 358 aaPredicted RBP13.4□□□□□ -0.26
SIPA1L3-201ENST00000222345 ARL9Q6T311 187 aa13.4□□□□□ -0.26
SIPA1L3-201ENST00000222345 FAM151BQ6UXP7 276 aa13.4□□□□□ -0.26
SIPA1L3-201ENST00000222345 SLC35G5Q96KT7 338 aa13.4□□□□□ -0.26
SIPA1L3-201ENST00000222345 AGO3Q9H9G7 860 aaKnown RBP13.4□□□□□ -0.26
SIPA1L3-201ENST00000222345 RRAGCQ9HB90 399 aa13.4□□□□□ -0.26
SIPA1L3-201ENST00000222345 CHD1O14646 1710 aa13.4□□□□□ -0.27
SIPA1L3-201ENST00000222345 ZNF670-ZNF695F2Z2N8 137 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 CAP2P40123 477 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 RPIAP49247 311 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 SPIN4Q56A73 249 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 ANKRD22Q5VYY1 191 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 NUP54Q7Z3B4 507 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 ZNF565Q8N9K5 539 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 CGREF1Q99674 301 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 STUB1Q9UNE7 303 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 ZNF510Q9Y2H8 683 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 LRRTM2O43300 516 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 GMDSO60547 372 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 TAGLNQ01995 201 aaKnown RBP13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 TLE3Q04726 772 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 BPIFA1Q9NP55 256 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 CEP170BQ9Y4F5 1589 aaPredicted RBP13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 DNAJB6O75190 326 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 OAZ2O95190 189 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 STT3AP46977 705 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 HLCSP50747 726 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 GALNT7Q86SF2 657 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 NEIL3Q8TAT5 605 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 OTUB2Q96DC9 234 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 FANCFQ9NPI8 374 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 NPAP1Q9NZP6 1156 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 EXTL2Q9UBQ6 330 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 DUXAA6NLW8 204 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 SGCEO43556 437 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 UBA1P22314 1058 aaKnown RBP13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 FECHP22830 423 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 MYF6P23409 242 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 CDK2P24941 298 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 EVI2BP34910 448 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 MC1RQ01726 317 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 FNDC3BQ53EP0 1204 aaKnown RBP13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 PRAMEF13Q5VWM6 474 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 FAM109AQ8N4B1 249 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 AQP11Q8NBQ7 271 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 COPS5Q92905 334 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 ATG4CQ96DT6 458 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 DUSP26Q9BV47 211 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 UCK2Q9BZX2 261 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 ASF1AQ9Y294 204 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 MOXD2PA6NHM9 499 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 ZNF878C9JN71 531 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 CSDE1O75534 798 aaKnown RBP13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 ALG10BQ5I7T1 473 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 ATAD3CQ5T2N8 411 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 MPP7Q5T2T1 576 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 GTF2IRD2BQ6EKJ0 949 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 GTF2IRD2Q86UP8 949 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 ZFPM1Q8IX07 1006 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 VWA5B2Q8N398 1253 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 CCDC120Q96HB5 630 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 HIST1H2AAQ96QV6 131 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 TMPRSS4Q9NRS4 437 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 ADRB2P07550 413 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 EML3Q32P44 896 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 KCTD9Q7L273 389 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 RD3Q7Z3Z2 195 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 DCP2Q8IU60 420 aaKnown RBP13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 SAMD12Q8N8I0 201 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 ZNF416Q9BWM5 594 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 ABCG8Q9H221 673 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 GTF2IRD1Q9UHL9 959 aa13.39□□□□□ -0.27
SIPA1L3-201ENST00000222345 TCRBV5S4A2TA0A5A2 114 aa13.38□□□□□ -0.27
SIPA1L3-201ENST00000222345 TSPAN15O95858 294 aa13.38□□□□□ -0.27
SIPA1L3-201ENST00000222345 UBXN11Q5T124 520 aa13.38□□□□□ -0.27
SIPA1L3-201ENST00000222345 MSANTD2Q6P1R3 559 aa13.38□□□□□ -0.27
SIPA1L3-201ENST00000222345 GTPBP8Q8N3Z3 284 aaPredicted RBP13.38□□□□□ -0.27
SIPA1L3-201ENST00000222345 CXorf40BQ96DE9 158 aa13.38□□□□□ -0.27
SIPA1L3-201ENST00000222345 FBXL20Q96IG2 436 aa13.38□□□□□ -0.27
SIPA1L3-201ENST00000222345 ZBED3Q96IU2 234 aaPredicted RBP13.38□□□□□ -0.27
SIPA1L3-201ENST00000222345 MS4A12Q9NXJ0 267 aa13.38□□□□□ -0.27
SIPA1L3-201ENST00000222345 DERAQ9Y315 318 aa13.38□□□□□ -0.27
SIPA1L3-201ENST00000222345 PCDHGA8Q9Y5G5 932 aa13.38□□□□□ -0.27
SIPA1L3-201ENST00000222345 SLC25A14O95258 325 aaPredicted RBP13.38□□□□□ -0.27
SIPA1L3-201ENST00000222345 NDST3O95803 873 aa13.38□□□□□ -0.27
SIPA1L3-201ENST00000222345 SLC16A8O95907 504 aa13.38□□□□□ -0.27
SIPA1L3-201ENST00000222345 NFATC3Q12968 1075 aa13.38□□□□□ -0.27
SIPA1L3-201ENST00000222345 MEP1AQ16819 746 aa13.38□□□□□ -0.27
SIPA1L3-201ENST00000222345 TICAM1Q8IUC6 712 aa13.38□□□□□ -0.27
SIPA1L3-201ENST00000222345 PSD4Q8NDX1 1056 aa13.38□□□□□ -0.27
SIPA1L3-201ENST00000222345 REPS2Q8NFH8 660 aa13.38□□□□□ -0.27
SIPA1L3-201ENST00000222345 SLC6A16Q9GZN6 736 aa13.38□□□□□ -0.27
SIPA1L3-201ENST00000222345 FAM86C1Q9NVL1 165 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms