RNA–Protein interactions for RNA: ENST00000221996.11

CRX-201, Transcript of cone-rod homeobox, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CRX, Length 4,470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-201ENST00000221996 PDFQ9HBH1 243 aa9.5□□□□□ -0.89
CRX-201ENST00000221996 PTBP2Q9UKA9 531 aaKnown RBP9.5□□□□□ -0.89
CRX-201ENST00000221996 SNTNA6NMZ2 147 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 AP2A2O94973 939 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 ZDHHC11BP0C7U3 371 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 ELK4P28324 431 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 ALDH4A1P30038 563 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 PLA2G16P53816 162 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 MEF2AQ02078 507 aaPredicted RBP9.49□□□□□ -0.89
CRX-201ENST00000221996 SF1Q15637 639 aaKnown RBP9.49□□□□□ -0.89
CRX-201ENST00000221996 ZC3H12BQ5HYM0 836 aaKnown RBP9.49□□□□□ -0.89
CRX-201ENST00000221996 DEPDC1Q5TB30 811 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 TYW3Q6IPR3 259 aaKnown RBP9.49□□□□□ -0.89
CRX-201ENST00000221996 ENPP6Q6UWR7 440 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 KNL1Q8NG31 2342 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 LKAAEAR1Q8TD35 194 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 YIPF2Q9BWQ6 316 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 UBAP1Q9NZ09 502 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 PSME2Q9UL46 239 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 NCKAP1Q9Y2A7 1128 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 A0A1W2PRB8 838 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 ADAMDEC1O15204 470 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 KLK1P06870 262 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 KCNAB2Q13303 367 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 DOC2AQ14183 400 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 IFI44LQ53G44 452 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 SPIN4Q56A73 249 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 FAM219BQ5XKK7 198 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 TNFAIP8L2Q6P589 184 aaPredicted RBP9.49□□□□□ -0.89
CRX-201ENST00000221996 SLCO6A1Q86UG4 719 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 CELF5Q8N6W0 485 aaKnown RBP9.49□□□□□ -0.89
CRX-201ENST00000221996 OR14C36Q8NHC7 312 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 ZFAND2BQ8WV99 257 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 YTHDF1Q9BYJ9 559 aaKnown RBP9.49□□□□□ -0.89
CRX-201ENST00000221996 WDR70Q9NW82 654 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 CLN6Q9NWW5 311 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 FAM120CQ9NX05 1096 aaKnown RBP9.49□□□□□ -0.89
CRX-201ENST00000221996 TRBV23OR9-2A0A075B6M9 112 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 A0A096LPI6 279 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 LOC100130705A0A1B0GUX0 176 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 KPNA4O00629 521 aaPredicted RBP9.49□□□□□ -0.89
CRX-201ENST00000221996 TRIM24O15164 1050 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 SERPINB7O75635 380 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 PRAMEF12O95522 483 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 BUD31P41223 144 aaPredicted RBP9.49□□□□□ -0.89
CRX-201ENST00000221996 CCR3P51677 355 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 CLCN7P51798 805 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 CLDN8P56748 225 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 FPGSQ05932 587 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 PRAMEF14Q5SWL7 426 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 PRAMEF13Q5VWM6 474 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 ATG9BQ674R7 924 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 NEK5Q6P3R8 708 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 GALNT18Q6P9A2 607 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 KIAA1324Q6UXG2 1013 aaKnown RBP9.49□□□□□ -0.89
CRX-201ENST00000221996 CBARPQ8N350 705 aaPredicted RBP9.49□□□□□ -0.89
CRX-201ENST00000221996 CHCHD4Q8N4Q1 142 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 CPA6Q8N4T0 437 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 BORCS5Q969J3 196 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 GTPBP3Q969Y2 492 aaKnown RBP9.49□□□□□ -0.89
CRX-201ENST00000221996 C12orf43Q96C57 262 aaKnown RBP9.49□□□□□ -0.89
CRX-201ENST00000221996 ZNF597Q96LX8 424 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 ZNF607Q96SK3 696 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 CCDC3Q9BQI4 270 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 SLC35A5Q9BS91 424 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 SEC14L3Q9UDX4 400 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 USP22Q9UPT9 525 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 TMEM98Q9Y2Y6 226 aa9.49□□□□□ -0.89
CRX-201ENST00000221996 FAM92AA1XBS5 289 aa9.48□□□□□ -0.89
CRX-201ENST00000221996 C7orf72A4D263 438 aa9.48□□□□□ -0.89
CRX-201ENST00000221996 IFNW1P05000 195 aa9.48□□□□□ -0.89
CRX-201ENST00000221996 EIF2S1P05198 315 aaKnown RBP9.48□□□□□ -0.89
CRX-201ENST00000221996 MPC1LP0DKB6 136 aa9.48□□□□□ -0.89
CRX-201ENST00000221996 CD1EP15812 388 aa9.48□□□□□ -0.89
CRX-201ENST00000221996 KELP23276 732 aa9.48□□□□□ -0.89
CRX-201ENST00000221996 HLA-FP30511 346 aa9.48□□□□□ -0.89
CRX-201ENST00000221996 MAT2AP31153 395 aaKnown RBP9.48□□□□□ -0.89
CRX-201ENST00000221996 CCR7P32248 378 aa9.48□□□□□ -0.89
CRX-201ENST00000221996 CBLBQ13191 982 aa9.48□□□□□ -0.89
CRX-201ENST00000221996 NCF4Q15080 339 aa9.48□□□□□ -0.89
CRX-201ENST00000221996 RGS21Q2M5E4 152 aa9.48□□□□□ -0.89
CRX-201ENST00000221996 PTCHD4Q6ZW05 846 aa9.48□□□□□ -0.89
CRX-201ENST00000221996 HTR3DQ70Z44 454 aa9.48□□□□□ -0.89
CRX-201ENST00000221996 PDPRQ8NCN5 879 aa9.48□□□□□ -0.89
CRX-201ENST00000221996 OR2T11Q8NH01 316 aa9.48□□□□□ -0.89
CRX-201ENST00000221996 CXorf40BQ96DE9 158 aa9.48□□□□□ -0.89
CRX-201ENST00000221996 TRIT1Q9H3H1 467 aaKnown RBP9.48□□□□□ -0.89
CRX-201ENST00000221996 DDX28Q9NUL7 540 aaKnown RBP9.48□□□□□ -0.89
CRX-201ENST00000221996 ELOVL2Q9NXB9 296 aa9.48□□□□□ -0.89
CRX-201ENST00000221996 SELENONQ9NZV5 590 aa9.48□□□□□ -0.89
CRX-201ENST00000221996 PDE9AO76083 593 aa9.48□□□□□ -0.89
CRX-201ENST00000221996 APODP05090 189 aa9.48□□□□□ -0.89
CRX-201ENST00000221996 RPL10P27635 214 aaKnown RBP9.48□□□□□ -0.89
CRX-201ENST00000221996 DNAJA1P31689 397 aaKnown RBP9.48□□□□□ -0.89
CRX-201ENST00000221996 PCYT1AP49585 367 aa9.48□□□□□ -0.89
CRX-201ENST00000221996 HK3P52790 923 aa9.48□□□□□ -0.89
CRX-201ENST00000221996 SFSWAPQ12872 951 aaKnown RBP9.48□□□□□ -0.89
CRX-201ENST00000221996 Q6ZSR9 355 aa9.48□□□□□ -0.89
CRX-201ENST00000221996 RFLNAQ6ZTI6 216 aa9.48□□□□□ -0.89
CRX-201ENST00000221996 GAREM2Q75VX8 874 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms