RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 GOLGA8KD6RF30 607 aa15.13■□□□□ 0.01
ERCC1-201ENST00000013807 H0YGG7 62 aa15.13■□□□□ 0.01
ERCC1-201ENST00000013807 GOLGA8TH3BQL2 631 aa15.13■□□□□ 0.01
ERCC1-201ENST00000013807 AVILO75366 819 aa15.13■□□□□ 0.01
ERCC1-201ENST00000013807 CHRM3P20309 590 aa15.13■□□□□ 0.01
ERCC1-201ENST00000013807 ARF3P61204 181 aaPredicted RBP15.13■□□□□ 0.01
ERCC1-201ENST00000013807 OCA2Q04671 838 aa15.13■□□□□ 0.01
ERCC1-201ENST00000013807 DSG2Q14126 1118 aa15.13■□□□□ 0.01
ERCC1-201ENST00000013807 RBBP7Q16576 425 aa15.13■□□□□ 0.01
ERCC1-201ENST00000013807 KLHL38Q2WGJ6 581 aa15.13■□□□□ 0.01
ERCC1-201ENST00000013807 ACSBG2Q5FVE4 666 aa15.13■□□□□ 0.01
ERCC1-201ENST00000013807 RPUSD3Q6P087 351 aaKnown RBP15.13■□□□□ 0.01
ERCC1-201ENST00000013807 KCNMB4Q86W47 210 aa15.13■□□□□ 0.01
ERCC1-201ENST00000013807 PAQR7Q86WK9 346 aa15.13■□□□□ 0.01
ERCC1-201ENST00000013807 DTWD1Q8N5C7 304 aa15.13■□□□□ 0.01
ERCC1-201ENST00000013807 MCUQ8NE86 351 aa15.13■□□□□ 0.01
ERCC1-201ENST00000013807 OR2A5Q96R48 311 aa15.13■□□□□ 0.01
ERCC1-201ENST00000013807 TRIM56Q9BRZ2 755 aaKnown RBP15.13■□□□□ 0.01
ERCC1-201ENST00000013807 LZTFL1Q9NQ48 299 aa15.13■□□□□ 0.01
ERCC1-201ENST00000013807 SCN3AQ9NY46 2000 aa15.13■□□□□ 0.01
ERCC1-201ENST00000013807 UTP6Q9NYH9 597 aaKnown RBP15.13■□□□□ 0.01
ERCC1-201ENST00000013807 CDC14AQ9UNH5 594 aa15.13■□□□□ 0.01
ERCC1-201ENST00000013807 NEU2Q9Y3R4 380 aa15.13■□□□□ 0.01
ERCC1-201ENST00000013807 CSAG2Q9Y5P2 127 aa15.13■□□□□ 0.01
ERCC1-201ENST00000013807 MAU2Q9Y6X3 613 aa15.13■□□□□ 0.01
ERCC1-201ENST00000013807 LRBAP50851 2863 aa15.12■□□□□ 0.01
ERCC1-201ENST00000013807 ZCWPW2A0A1B0GU75 182 aa15.12■□□□□ 0.01
ERCC1-201ENST00000013807 ZNF839A8K0R7 811 aa15.12■□□□□ 0.01
ERCC1-201ENST00000013807 E7ENX8 843 aa15.12■□□□□ 0.01
ERCC1-201ENST00000013807 GFYI3L273 518 aa15.12■□□□□ 0.01
ERCC1-201ENST00000013807 VPS26AO75436 327 aa15.12■□□□□ 0.01
ERCC1-201ENST00000013807 CATP04040 527 aaKnown RBP15.12■□□□□ 0.01
ERCC1-201ENST00000013807 FDXRP22570 491 aa15.12■□□□□ 0.01
ERCC1-201ENST00000013807 SLC26A3P40879 764 aa15.12■□□□□ 0.01
ERCC1-201ENST00000013807 SKIV2L2P42285 1042 aaKnown RBP15.12■□□□□ 0.01
ERCC1-201ENST00000013807 GLRBP48167 497 aa15.12■□□□□ 0.01
ERCC1-201ENST00000013807 TAP2Q03519 686 aa15.12■□□□□ 0.01
ERCC1-201ENST00000013807 MFAP5Q13361 173 aa15.12■□□□□ 0.01
ERCC1-201ENST00000013807 TLR1Q15399 786 aa15.12■□□□□ 0.01
ERCC1-201ENST00000013807 HIF1AQ16665 826 aa15.12■□□□□ 0.01
ERCC1-201ENST00000013807 IRAK1BP1Q5VVH5 260 aa15.12■□□□□ 0.01
ERCC1-201ENST00000013807 ISLR2Q6UXK2 745 aa15.12■□□□□ 0.01
ERCC1-201ENST00000013807 SHISA6Q6ZSJ9 500 aa15.12■□□□□ 0.01
ERCC1-201ENST00000013807 DNAJB14Q8TBM8 379 aa15.12■□□□□ 0.01
ERCC1-201ENST00000013807 ASB11Q8WXH4 323 aa15.12■□□□□ 0.01
ERCC1-201ENST00000013807 KCNJ9Q92806 393 aa15.12■□□□□ 0.01
ERCC1-201ENST00000013807 MIEF2Q96C03 454 aa15.12■□□□□ 0.01
ERCC1-201ENST00000013807 CRB3Q9BUF7 120 aa15.12■□□□□ 0.01
ERCC1-201ENST00000013807 EPS8L2Q9H6S3 715 aa15.12■□□□□ 0.01
ERCC1-201ENST00000013807 SYNPO2LQ9H987 977 aa15.12■□□□□ 0.01
ERCC1-201ENST00000013807 MRPS30Q9NP92 439 aaKnown RBP15.12■□□□□ 0.01
ERCC1-201ENST00000013807 MAP10Q9P2G4 905 aa15.12■□□□□ 0.01
ERCC1-201ENST00000013807 C3orf18Q9UK00 162 aa15.12■□□□□ 0.01
ERCC1-201ENST00000013807 SDR42E2A6NKP2 422 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 EIF3FO00303 357 aaPredicted RBP15.11■□□□□ 0.01
ERCC1-201ENST00000013807 TXNDC9O14530 226 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 PRPF4O43172 522 aaKnown RBP eCLIP15.11■□□□□ 0.01
ERCC1-201ENST00000013807 CEP104O60308 925 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 ALOX12BO75342 701 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 SLC16A8O95907 504 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 MPC1LP0DKB6 136 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 ATXN8OSP0DMR3 200 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 ENO3P13929 434 aaPredicted RBP15.11■□□□□ 0.01
ERCC1-201ENST00000013807 ACPPP15309 386 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 EZRP15311 586 aaKnown RBP15.11■□□□□ 0.01
ERCC1-201ENST00000013807 MAGEA3P43357 314 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 PNLIPRP1P54315 467 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 ABATP80404 500 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 FAM53BQ14153 422 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 ZNF169Q14929 603 aaPredicted RBP15.11■□□□□ 0.01
ERCC1-201ENST00000013807 TTLL9Q3SXZ7 439 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 ICE2Q659A1 982 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 HIST2H2BCQ6DN03 193 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 SUSD1Q6UWL2 747 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 CYHR1Q6ZMK1 362 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 NDUFAF7Q7L592 441 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 MAMDC2Q7Z304 686 aaPredicted RBP15.11■□□□□ 0.01
ERCC1-201ENST00000013807 LAPTM4BQ86VI4 370 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 LRRC8AQ8IWT6 810 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 REXO1L1PQ8IX06 675 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 PARP9Q8IXQ6 854 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 LMNTD2Q8IXW0 634 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 LRRC56Q8IYG6 542 aaPredicted RBP15.11■□□□□ 0.01
ERCC1-201ENST00000013807 RASGEF1CQ8N431 466 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 METTL27Q8N6F8 245 aaPredicted RBP15.11■□□□□ 0.01
ERCC1-201ENST00000013807 OTUD6BQ8N6M0 293 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 AMER3Q8N944 861 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 ZNF480Q8WV37 535 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 FAR1Q8WVX9 515 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 PSMF1Q92530 271 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 THOC3Q96J01 351 aaKnown RBP15.11■□□□□ 0.01
ERCC1-201ENST00000013807 C5orf34Q96MH7 638 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 PKP4Q99569 1192 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 ACAT2Q9BWD1 397 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 XAB2Q9HCS7 855 aaKnown RBP15.11■□□□□ 0.01
ERCC1-201ENST00000013807 DHRS7Q9Y394 339 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 COMMD10Q9Y6G5 202 aa15.11■□□□□ 0.01
ERCC1-201ENST00000013807 LOC102723996A0A087X1L8 192 aa15.1■□□□□ 0.01
ERCC1-201ENST00000013807 IDSB3KWA1 339 aa15.1■□□□□ 0.01
ERCC1-201ENST00000013807 E5RI56 91 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms